RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-222ENST00000495071 GCNT4Q9P109 453 aa14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 NOC2LQ9Y3T9 749 aaKnown RBP14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 NAV1Q8NEY1 1877 aa14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 COL16A1Q07092 1604 aaPredicted RBP14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 PSMC6P62333 389 aa14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 SETQ01105 290 aaPredicted RBP14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 REEP2Q9BRK0 252 aa14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 GLT8D2Q9H1C3 349 aa14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 GAKO14976 1311 aa14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 SPDYE3A6NKU9 549 aa14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 MYBP10242 640 aa14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 CUL1Q13616 776 aa14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 NAA35Q5VZE5 725 aa14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 CATSPER3Q86XQ3 398 aa14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 ISCUQ9H1K1 167 aa14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 DPH5Q9H2P9 285 aa14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 SWAP70Q9UH65 585 aa14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 AMACRQ9UHK6 382 aa14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 PCDHA2Q9Y5H9 948 aa14.67□□□□□ -0.06
SUPT20H-222ENST00000495071 FAM196BA6NMK8 535 aa14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 GFPT2O94808 682 aa14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 PON1P27169 355 aa14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 USP8P40818 1118 aa14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 MDH1P40925 334 aaKnown RBP14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 CLK2P49760 499 aaKnown RBP14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 MARSP56192 900 aaKnown RBP14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 IFFO1Q0D2I5 559 aa14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 C15orf52Q6ZUT6 534 aaKnown RBP14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 FRMD5Q7Z6J6 570 aa14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 MREGQ8N565 214 aa14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 METTL13Q8N6R0 699 aa14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 PPP1R12BO60237 982 aaPredicted RBP14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 ABCB4P21439 1286 aa14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 HSD17B3P37058 310 aa14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 ARHGAP4P98171 946 aa14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 ARSHQ5FYA8 562 aa14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 GJB7Q6PEY0 223 aa14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 IRF2BP2Q7Z5L9 587 aa14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 CCDC26Q8TAB7 109 aa14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.66□□□□□ -0.064e-7■■■■□ 21.2
SUPT20H-222ENST00000495071 BHMT2Q9H2M3 363 aa14.66□□□□□ -0.06
SUPT20H-222ENST00000495071 SFI1A8K8P3 1242 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 NR3C1P04150 777 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 TCP10Q12799 353 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 IFT88Q13099 833 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 PTGISQ16647 500 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 HYIQ5T013 277 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 NLRP14Q86W24 1093 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 ZNF473Q8WTR7 871 aaKnown RBP14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 PIK3R5Q8WYR1 880 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 CCT8L2Q96SF2 557 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 GABPAQ06546 454 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 RUFY4Q6ZNE9 571 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 ADAT2Q7Z6V5 191 aaKnown RBP14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 MXD3Q9BW11 206 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 PITPNM2Q9BZ72 1349 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 MEFVO15553 781 aaPredicted RBP14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 DAPK3O43293 454 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 AKAP3O75969 853 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 CPP00450 1065 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 HSPA9P38646 679 aaKnown RBP14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 NOVP48745 357 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 CASP4P49662 377 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 SLC12A3P55017 1021 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 GIT2Q14161 759 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 SLFN13Q68D06 897 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 SPATS2Q86XZ4 545 aaKnown RBP14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 TPCN2Q8NHX9 752 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 ZC3H12CQ9C0D7 883 aaKnown RBP14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 METTL14Q9HCE5 456 aaKnown RBP14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 GOPCQ9HD26 462 aa14.65□□□□□ -0.06
SUPT20H-222ENST00000495071 RSPH10B2B2RC85 870 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 SERPINB2P05120 415 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 RSPH10BP0C881 870 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 STAT1P42224 750 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 SYCE1Q8N0S2 351 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 PLCB1Q9NQ66 1216 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 FBXL5Q9UKA1 691 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 BBOX1O75936 387 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 SHMT1P34896 483 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 RBM5P52756 815 aaKnown RBP eCLIP14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 CD302Q8IX05 232 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 KAT2BQ92831 832 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 AMFRQ9UKV5 643 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 UTP11Q9Y3A2 253 aaKnown RBP14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 FAM13AO94988 1023 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 ITGA4P13612 1032 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 HDLBPQ00341 1268 aaKnown RBP14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 DOK7Q18PE1 504 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 KRT71Q3SY84 523 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 ACTRT1Q8TDG2 376 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 KCNMB3Q9NPA1 279 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 STRCQ7RTU9 1775 aa14.64□□□□□ -0.07
SUPT20H-222ENST00000495071 PDXKO00764 312 aa14.63□□□□□ -0.07
SUPT20H-222ENST00000495071 RBM46Q8TBY0 533 aaKnown RBP14.63□□□□□ -0.07
SUPT20H-222ENST00000495071 MYCBPAPQ8TBZ2 947 aa14.63□□□□□ -0.07
SUPT20H-222ENST00000495071 TMBIM4Q9HC24 238 aa14.63□□□□□ -0.07
SUPT20H-222ENST00000495071 IGKV6D-41A0A0C4DH26 115 aa14.63□□□□□ -0.07
SUPT20H-222ENST00000495071 CCDC188H7C350 402 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms