RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 HMGN5P82970 282 aaKnown RBP19.92■□□□□ 0.78
HDAC4-211ENST00000494800 MBTPS1Q14703 1052 aa19.92■□□□□ 0.78
HDAC4-211ENST00000494800 ZNF484Q5JVG2 852 aa19.92■□□□□ 0.78
HDAC4-211ENST00000494800 FAM26DQ5JW98 314 aa19.92■□□□□ 0.78
HDAC4-211ENST00000494800 MARCH8Q5T0T0 291 aa19.92■□□□□ 0.78
HDAC4-211ENST00000494800 IER5Q5VY09 327 aa19.92■□□□□ 0.78
HDAC4-211ENST00000494800 RUFY4Q6ZNE9 571 aa19.92■□□□□ 0.78
HDAC4-211ENST00000494800 RDM1Q8NG50 284 aa19.92■□□□□ 0.78
HDAC4-211ENST00000494800 DNAJB3Q8WWF6 145 aa19.92■□□□□ 0.78
HDAC4-211ENST00000494800 BBXQ8WY36 941 aaPredicted RBP19.92■□□□□ 0.78
HDAC4-211ENST00000494800 APBB2Q92870 758 aa19.92■□□□□ 0.78
HDAC4-211ENST00000494800 MBOAT7Q96N66 472 aa19.92■□□□□ 0.78
HDAC4-211ENST00000494800 KIF2CQ99661 725 aa19.92■□□□□ 0.78
HDAC4-211ENST00000494800 TTYH1Q9H313 450 aaPredicted RBP19.92■□□□□ 0.78
HDAC4-211ENST00000494800 GABBR1Q9UBS5 961 aa19.92■□□□□ 0.78
HDAC4-211ENST00000494800 PCDHA2Q9Y5H9 948 aa19.92■□□□□ 0.78
HDAC4-211ENST00000494800 MAFBQ9Y5Q3 323 aaPredicted RBP19.92■□□□□ 0.78
HDAC4-211ENST00000494800 SCN5AQ14524 2016 aa19.92■□□□□ 0.78
HDAC4-211ENST00000494800 EDIL3O43854 480 aa19.91■□□□□ 0.78
HDAC4-211ENST00000494800 MMP1P03956 469 aa19.91■□□□□ 0.78
HDAC4-211ENST00000494800 WDR5P61964 334 aaKnown RBP19.91■□□□□ 0.78
HDAC4-211ENST00000494800 PLEKHG4Q58EX7 1191 aa19.91■□□□□ 0.78
HDAC4-211ENST00000494800 HERC6Q8IVU3 1022 aa19.91■□□□□ 0.78
HDAC4-211ENST00000494800 FAM184AQ8NB25 1140 aa19.91■□□□□ 0.78
HDAC4-211ENST00000494800 OXER1Q8TDS5 423 aa19.91■□□□□ 0.78
HDAC4-211ENST00000494800 FAM20AQ96MK3 541 aa19.91■□□□□ 0.78
HDAC4-211ENST00000494800 GUCD1Q96NT3 240 aa19.91■□□□□ 0.78
HDAC4-211ENST00000494800 ZBED2Q9BTP6 218 aa19.91■□□□□ 0.78
HDAC4-211ENST00000494800 FAM49AQ9H0Q0 323 aaPredicted RBP19.91■□□□□ 0.78
HDAC4-211ENST00000494800 SMIM35A0A1B0GVV1 85 aa19.9■□□□□ 0.78
HDAC4-211ENST00000494800 PSMD10O75832 226 aa19.9■□□□□ 0.78
HDAC4-211ENST00000494800 RABGGTBP53611 331 aa19.9■□□□□ 0.78
HDAC4-211ENST00000494800 PPP2R2DQ66LE6 453 aa19.9■□□□□ 0.78
HDAC4-211ENST00000494800 MTHFD1LQ6UB35 978 aa19.9■□□□□ 0.78
HDAC4-211ENST00000494800 MIER3Q7Z3K6 550 aa19.9■□□□□ 0.78
HDAC4-211ENST00000494800 NME8Q8N427 588 aa19.9■□□□□ 0.78
HDAC4-211ENST00000494800 DBF4BQ8NFT6 615 aa19.9■□□□□ 0.78
HDAC4-211ENST00000494800 TRAPPC12Q8WVT3 735 aa19.9■□□□□ 0.78
HDAC4-211ENST00000494800 CDX2Q99626 313 aaPredicted RBP19.9■□□□□ 0.78
HDAC4-211ENST00000494800 NKX2-4Q9H2Z4 354 aa19.9■□□□□ 0.78
HDAC4-211ENST00000494800 UNC45AQ9H3U1 944 aa19.9■□□□□ 0.78
HDAC4-211ENST00000494800 NRBP2Q9NSY0 501 aa19.9■□□□□ 0.78
HDAC4-211ENST00000494800 TRIP12Q14669 1992 aaPredicted RBP19.9■□□□□ 0.78
HDAC4-211ENST00000494800 BAG4O95429 457 aaKnown RBP19.89■□□□□ 0.77
HDAC4-211ENST00000494800 AMHP03971 560 aa19.89■□□□□ 0.77
HDAC4-211ENST00000494800 KLRC1P26715 233 aa19.89■□□□□ 0.77
HDAC4-211ENST00000494800 FOSBP53539 338 aa19.89■□□□□ 0.77
HDAC4-211ENST00000494800 MRPS6P82932 125 aaKnown RBP19.89■□□□□ 0.77
HDAC4-211ENST00000494800 NR5A1Q13285 461 aa19.89■□□□□ 0.77
HDAC4-211ENST00000494800 KRT40Q6A162 431 aa19.89■□□□□ 0.77
HDAC4-211ENST00000494800 DIS3L2Q8IYB7 885 aaKnown RBP19.89■□□□□ 0.77
HDAC4-211ENST00000494800 ETNPPLQ8TBG4 499 aa19.89■□□□□ 0.77
HDAC4-211ENST00000494800 C8orf76Q96K31 380 aa19.89■□□□□ 0.77
HDAC4-211ENST00000494800 IFIH1Q9BYX4 1025 aaKnown RBP19.89■□□□□ 0.77
HDAC4-211ENST00000494800 IGSF9BQ9UPX0 1349 aa19.89■□□□□ 0.77
HDAC4-211ENST00000494800 TBX3O15119 743 aa19.88■□□□□ 0.77
HDAC4-211ENST00000494800 TLL1O43897 1013 aa19.88■□□□□ 0.77
HDAC4-211ENST00000494800 CHRNA1P02708 482 aa19.88■□□□□ 0.77
HDAC4-211ENST00000494800 ST3GAL1Q11201 340 aa19.88■□□□□ 0.77
HDAC4-211ENST00000494800 TRMT1LQ7Z2T5 733 aaKnown RBP19.88■□□□□ 0.77
HDAC4-211ENST00000494800 USP38Q8NB14 1042 aa19.88■□□□□ 0.77
HDAC4-211ENST00000494800 YBX2Q9Y2T7 364 aaKnown RBP19.88■□□□□ 0.77
HDAC4-211ENST00000494800 KIF3AQ9Y496 699 aa19.88■□□□□ 0.77
HDAC4-211ENST00000494800 CDY2AQ9Y6F7 541 aa19.88■□□□□ 0.77
HDAC4-211ENST00000494800 BTBD18B2RXH4 712 aa19.87■□□□□ 0.77
HDAC4-211ENST00000494800 SLC37A4O43826 429 aa19.87■□□□□ 0.77
HDAC4-211ENST00000494800 OATP04181 439 aa19.87■□□□□ 0.77
HDAC4-211ENST00000494800 GHRP10912 638 aa19.87■□□□□ 0.77
HDAC4-211ENST00000494800 FOSL2P15408 326 aa19.87■□□□□ 0.77
HDAC4-211ENST00000494800 MCM2P49736 904 aa19.87■□□□□ 0.77
HDAC4-211ENST00000494800 MGAT3Q09327 533 aa19.87■□□□□ 0.77
HDAC4-211ENST00000494800 GNL2Q13823 731 aaKnown RBP19.87■□□□□ 0.77
HDAC4-211ENST00000494800 SLFN12Q8IYM2 578 aa19.87■□□□□ 0.77
HDAC4-211ENST00000494800 GJA10Q969M2 543 aa19.87■□□□□ 0.77
HDAC4-211ENST00000494800 GAS2L1Q99501 681 aaPredicted RBP19.87■□□□□ 0.77
HDAC4-211ENST00000494800 KCNMB3Q9NPA1 279 aa19.87■□□□□ 0.77
HDAC4-211ENST00000494800 TRPV2Q9Y5S1 764 aa19.87■□□□□ 0.77
HDAC4-211ENST00000494800 SQORQ9Y6N5 450 aa19.87■□□□□ 0.77
HDAC4-211ENST00000494800 KAT6AQ92794 2004 aa19.86■□□□□ 0.77
HDAC4-211ENST00000494800 MAGEB2O15479 319 aa19.86■□□□□ 0.77
HDAC4-211ENST00000494800 DKC1O60832 514 aaKnown RBP eCLIP19.86■□□□□ 0.771e-7■■■■■ 40.8
HDAC4-211ENST00000494800 CA3P07451 260 aa19.86■□□□□ 0.77
HDAC4-211ENST00000494800 ATP4AP20648 1035 aa19.86■□□□□ 0.77
HDAC4-211ENST00000494800 DEFB103AP81534 67 aa19.86■□□□□ 0.77
HDAC4-211ENST00000494800 PRKCEQ02156 737 aa19.86■□□□□ 0.77
HDAC4-211ENST00000494800 GRIN2CQ14957 1233 aa19.86■□□□□ 0.77
HDAC4-211ENST00000494800 TSHZ1Q6ZSZ6 1077 aa19.86■□□□□ 0.77
HDAC4-211ENST00000494800 MYLIPQ8WY64 445 aa19.86■□□□□ 0.77
HDAC4-211ENST00000494800 TNFRSF25Q93038 417 aa19.86■□□□□ 0.77
HDAC4-211ENST00000494800 ZBTB10Q96DT7 871 aa19.86■□□□□ 0.77
HDAC4-211ENST00000494800 MYOGP15173 224 aa19.85■□□□□ 0.77
HDAC4-211ENST00000494800 TMOD1P28289 359 aa19.85■□□□□ 0.77
HDAC4-211ENST00000494800 TMEM62Q0P6H9 643 aa19.85■□□□□ 0.77
HDAC4-211ENST00000494800 PPP2R5CQ13362 524 aa19.85■□□□□ 0.77
HDAC4-211ENST00000494800 FBXO47Q5MNV8 452 aa19.85■□□□□ 0.77
HDAC4-211ENST00000494800 MYOCDQ8IZQ8 938 aa19.85■□□□□ 0.77
HDAC4-211ENST00000494800 METTL13Q8N6R0 699 aa19.85■□□□□ 0.77
HDAC4-211ENST00000494800 TBC1D32Q96NH3 1257 aa19.85■□□□□ 0.77
HDAC4-211ENST00000494800 RAD9AQ99638 391 aa19.85■□□□□ 0.77
HDAC4-211ENST00000494800 CELF4Q9BZC1 486 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms