RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 MMP1P03956 469 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 RPLP2P05387 115 aaKnown RBP10.99□□□□□ -0.65
UBR4-216ENST00000494503 SCG2P13521 617 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 GATMP50440 423 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 STAT5BP51692 787 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 KRT76Q01546 638 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 PLCB4Q15147 1175 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 CREB3L3Q68CJ9 461 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 WWC2Q6AWC2 1192 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 POTEBQ6S5H4 581 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 NPAS4Q8IUM7 802 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 CYP2W1Q8TAV3 490 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 TCEANC2Q96MN5 208 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 MXRA8Q9BRK3 442 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 PLVAPQ9BX97 442 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 PRKAG3Q9UGI9 489 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 MUTYHQ9UIF7 546 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 CD207Q9UJ71 328 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 PADI3Q9ULW8 664 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 PLAGL2Q9UPG8 496 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 PCDHB7Q9Y5E2 793 aa10.99□□□□□ -0.65
UBR4-216ENST00000494503 PLXNA4Q9HCM2 1894 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 MAFGO15525 162 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 MBTPS2O43462 519 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 TBX10O75333 385 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 IRS1P35568 1242 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 LTBRP36941 435 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 LIFRP42702 1097 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 NRIP1P48552 1158 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 SMAD4Q13485 552 aaKnown RBP10.98□□□□□ -0.65
UBR4-216ENST00000494503 RTN1Q16799 776 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 RNF20Q5VTR2 975 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 FAM160B1Q5W0V3 765 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 CMTR2Q8IYT2 770 aaKnown RBP10.98□□□□□ -0.65
UBR4-216ENST00000494503 KLHL23Q8NBE8 558 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 POF1BQ8WVV4 589 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 LINC01599Q8WXQ3 324 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 CLP1Q92989 425 aaKnown RBP10.98□□□□□ -0.65
UBR4-216ENST00000494503 PCYT2Q99447 389 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 ESYT1Q9BSJ8 1104 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 MTA3Q9BTC8 594 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 ANO3Q9BYT9 981 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 CELF4Q9BZC1 486 aaKnown RBP10.98□□□□□ -0.65
UBR4-216ENST00000494503 LSG1Q9H089 658 aaKnown RBP10.98□□□□□ -0.65
UBR4-216ENST00000494503 RBM28Q9NW13 759 aaKnown RBP10.98□□□□□ -0.65
UBR4-216ENST00000494503 TMEM260Q9NX78 707 aa10.98□□□□□ -0.65
UBR4-216ENST00000494503 ARIH1Q9Y4X5 557 aaPredicted RBP10.98□□□□□ -0.65
UBR4-216ENST00000494503 SMCO2A6NFE2 343 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 GOLGA8AA7E2F4 631 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 TBKBP1A7MCY6 615 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 GOLGA8BA8MQT2 603 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 ZBTB43O43298 467 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 RPS6KA5O75582 802 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 ITGB1P05556 798 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 ARP10275 920 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 CA8P35219 290 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 COL9A3Q14050 684 aaPredicted RBP10.97□□□□□ -0.65
UBR4-216ENST00000494503 SMAD2Q15796 467 aaKnown RBP10.97□□□□□ -0.65
UBR4-216ENST00000494503 CEP55Q53EZ4 464 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 JAKMIP3Q5VZ66 844 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 PDXDC2PQ6P474 469 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 MTHFD1LQ6UB35 978 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 ADGRD2Q7Z7M1 963 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 THNSL1Q8IYQ7 743 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 METTL13Q8N6R0 699 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 ZNF689Q96CS4 500 aaPredicted RBP10.97□□□□□ -0.65
UBR4-216ENST00000494503 BARX2Q9UMQ3 279 aaPredicted RBP10.97□□□□□ -0.65
UBR4-216ENST00000494503 PCDHB12Q9Y5F1 795 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 PCDHGC5Q9Y5F6 944 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 PCDHA2Q9Y5H9 948 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 V9GY48 417 aaPredicted RBP10.97□□□□□ -0.65
UBR4-216ENST00000494503 CNTNAP5Q8WYK1 1306 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 IGSF9BQ9UPX0 1349 aa10.97□□□□□ -0.65
UBR4-216ENST00000494503 FNDC1Q4ZHG4 1894 aaPredicted RBP10.96□□□□□ -0.65
UBR4-216ENST00000494503 NFASCO94856 1347 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 FOSP01100 380 aaPredicted RBP10.96□□□□□ -0.65
UBR4-216ENST00000494503 LINC00271P0C7V0 271 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 DNAJB1P25685 340 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 KLRC1P26715 233 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 ITGB3BPQ13352 177 aaPredicted RBP10.96□□□□□ -0.65
UBR4-216ENST00000494503 PPP1R18Q6NYC8 613 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 MIS18BP1Q6P0N0 1132 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 APOA5Q6Q788 366 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 HFE2Q6ZVN8 426 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 PLPPR4Q7Z2D5 763 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 RTN4RL1Q86UN2 441 aaPredicted RBP10.96□□□□□ -0.65
UBR4-216ENST00000494503 PLA2G4DQ86XP0 818 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 RNF135Q8IUD6 432 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 P2RX5Q93086 422 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 SCLT1Q96NL6 688 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 NEK1Q96PY6 1258 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 TLE6Q9H808 572 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 RC3H2Q9HBD1 1191 aaKnown RBP10.96□□□□□ -0.65
UBR4-216ENST00000494503 AGO4Q9HCK5 861 aaKnown RBP10.96□□□□□ -0.65
UBR4-216ENST00000494503 RIC8AQ9NPQ8 531 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 ZNF302Q9NR11 478 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 AAASQ9NRG9 546 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 SAMM50Q9Y512 469 aa10.96□□□□□ -0.65
UBR4-216ENST00000494503 KLF18A0A0U1RQI7 1052 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 SMIM35A0A1B0GVV1 85 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms