RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 ANKRD18BA2A2Z9 1011 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 MANSC4A6NHS7 340 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-219ENST00000494323 UBOX5O94941 541 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 FAM87AP0C7U9 286 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 CYP7A1P22680 504 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 ADMP35318 185 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 MMP14P50281 582 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 FOXO4P98177 505 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 CAP1Q01518 475 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 FXNQ16595 210 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 BBS9Q3SYG4 887 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 SUPT20HL1Q3ZLR7 823 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 CYP27C1Q4G0S4 372 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 ZNF662Q6ZS27 426 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 OTOP1Q7RTM1 612 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 SHISA5Q8N114 240 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 CD99L2Q8TCZ2 262 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 MICAL1Q8TDZ2 1067 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 PPP1R13LQ8WUF5 828 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 DNAAF4Q8WXU2 420 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 MRFAP1L1Q96HT8 127 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 WNK4Q96J92 1243 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 COX4I2Q96KJ9 171 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 PTPN18Q99952 460 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 PLA2G12BQ9BX93 195 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 OAS3Q9Y6K5 1087 aaKnown RBP6.5□□□□□ -1.37
PTCD3-219ENST00000494323 CEP290O15078 2479 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 KRTAP4-8A0A0G2JLE6 195 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 CYP26A1O43174 497 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 MYO1BO43795 1136 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 ADAMTS4O75173 837 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 CLEC3AO75596 197 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 EOMESO95936 686 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 IL1R1P14778 569 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 EN2P19622 333 aaPredicted RBP6.49□□□□□ -1.37
PTCD3-219ENST00000494323 RNF4P78317 190 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 CRHR2Q13324 411 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 IFIT5Q13325 482 aaKnown RBP6.49□□□□□ -1.37
PTCD3-219ENST00000494323 ZYXQ15942 572 aaKnown RBP6.49□□□□□ -1.37
PTCD3-219ENST00000494323 EPHA10Q5JZY3 1008 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 EGFLAMQ63HQ2 1017 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 LMBR1LQ6UX01 489 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 KRTAP19-1Q8IUB9 90 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 LINS1Q8NG48 757 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 SLC6A18Q96N87 628 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 SRPK1Q96SB4 655 aaKnown RBP6.49□□□□□ -1.37
PTCD3-219ENST00000494323 MYH16Q9H6N6 1097 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 TDRD3Q9H7E2 651 aaKnown RBP6.49□□□□□ -1.37
PTCD3-219ENST00000494323 SUCOQ9UBS9 1254 aaKnown RBP6.49□□□□□ -1.37
PTCD3-219ENST00000494323 GTF2IRD1Q9UHL9 959 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 TPX2Q9ULW0 747 aaKnown RBP6.49□□□□□ -1.37
PTCD3-219ENST00000494323 PTPN22Q9Y2R2 807 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 IRS2Q9Y4H2 1338 aa6.49□□□□□ -1.37
PTCD3-219ENST00000494323 FAM170BA6NMN3 283 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 TCP10L2B9ZVM9 353 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 VAMP4O75379 141 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 LEFTY1O75610 366 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 ZBTB48P10074 688 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-219ENST00000494323 GYG1P46976 350 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 PMS1P54277 932 aaKnown RBP6.48□□□□□ -1.37
PTCD3-219ENST00000494323 SP3Q02447 781 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 NCAPHQ15003 741 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 TCEAL1Q15170 157 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 MSMPQ1L6U9 139 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 HABP4Q5JVS0 413 aaKnown RBP6.48□□□□□ -1.37
PTCD3-219ENST00000494323 LARP1BQ659C4 914 aaKnown RBP6.48□□□□□ -1.37
PTCD3-219ENST00000494323 OTUD7BQ6GQQ9 843 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 LDHAL6AQ6ZMR3 332 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 C15orf52Q6ZUT6 534 aaKnown RBP6.48□□□□□ -1.37
PTCD3-219ENST00000494323 ZNF804AQ7Z570 1209 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 CDH24Q86UP0 819 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 TMEM192Q8IY95 271 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 ANKRD13AQ8IZ07 590 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 RIN3Q8TB24 985 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 RNF141Q8WVD5 230 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 RNPC3Q96LT9 517 aaKnown RBP6.48□□□□□ -1.37
PTCD3-219ENST00000494323 KREMEN1Q96MU8 473 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 ASPNQ9BXN1 380 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 PRDM5Q9NQX1 630 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-219ENST00000494323 ZNF70Q9UC06 446 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-219ENST00000494323 ZNF214Q9UL59 606 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-219ENST00000494323 MAPK8IP1Q9UQF2 711 aa6.48□□□□□ -1.37
PTCD3-219ENST00000494323 ZNF646O15015 1829 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-219ENST00000494323 FAM86C2PA6NEL3 165 aa6.47□□□□□ -1.37
PTCD3-219ENST00000494323 B2RBV5 119 aa6.47□□□□□ -1.37
PTCD3-219ENST00000494323 SLC7A5Q01650 507 aa6.47□□□□□ -1.37
PTCD3-219ENST00000494323 EXOSC9Q06265 439 aaKnown RBP6.47□□□□□ -1.37
PTCD3-219ENST00000494323 CCDC57Q2TAC2 916 aa6.47□□□□□ -1.37
PTCD3-219ENST00000494323 TAF7LQ5H9L4 462 aa6.47□□□□□ -1.37
PTCD3-219ENST00000494323 MFSD14BQ5SR56 506 aa6.47□□□□□ -1.37
PTCD3-219ENST00000494323 BEND3Q5T5X7 828 aa6.47□□□□□ -1.37
PTCD3-219ENST00000494323 VHLLQ6RSH7 139 aa6.47□□□□□ -1.37
PTCD3-219ENST00000494323 OPTNQ96CV9 577 aa6.47□□□□□ -1.37
PTCD3-219ENST00000494323 ERO1AQ96HE7 468 aa6.47□□□□□ -1.37
PTCD3-219ENST00000494323 FAM84BQ96KN1 310 aaPredicted RBP6.47□□□□□ -1.37
PTCD3-219ENST00000494323 PUS3Q9BZE2 481 aaKnown RBP6.47□□□□□ -1.37
PTCD3-219ENST00000494323 TMEM39BQ9GZU3 492 aa6.47□□□□□ -1.37
PTCD3-219ENST00000494323 CCDC113Q9H0I3 377 aa6.47□□□□□ -1.37
PTCD3-219ENST00000494323 CNNM1Q9NRU3 951 aa6.47□□□□□ -1.37
PTCD3-219ENST00000494323 C9orf78Q9NZ63 289 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms