RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 LRWD1Q9UFC0 647 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 WDR81Q562E7 1941 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 GOLGA6CA6NDK9 693 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 GOLGA6BA6NDN3 693 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 B4DLN1 442 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 MSH4O15457 936 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 TOMM70O94826 608 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 CAVIN2O95810 425 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 MYL1P05976 194 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 GOLGA6DP0CG33 693 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 CDC25BP30305 580 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 TECP42680 631 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 ZNF157P51786 506 aaPredicted RBP7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 ERVK-9P63128 1117 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 ERVK-24P63145 666 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 CAMK4Q16566 473 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 LONRF3Q496Y0 759 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 HYIQ5T013 277 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 WLSQ5T9L3 541 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 ARHGEF16Q5VV41 709 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 KRT79Q5XKE5 535 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 SH3RF1Q7Z6J0 888 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 EXOC8Q8IYI6 725 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 CCDC102AQ96A19 550 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 CALML4Q96GE6 196 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 RIT2Q99578 217 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 PAGR1Q9BTK6 254 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 WDR11Q9BZH6 1224 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 JADE2Q9NQC1 790 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 GOLGA6AQ9NYA3 693 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 STK17AQ9UEE5 414 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 SERTAD1Q9UHV2 236 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 ODF2LQ9ULJ1 636 aa7.99□□□□□ -1.13
SMARCE1-211ENST00000493660 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.99□□□□□ -1.135e-7■■■□□ 18.8
SMARCE1-211ENST00000493660 A0A087X0B3 334 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 AP1G2O75843 785 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 SLC34A2O95436 690 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 MUTP22033 750 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 PLCB2Q00722 1185 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 RRAGBQ5VZM2 374 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 CC2D1AQ6P1N0 951 aaPredicted RBP7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 PDXDC2PQ6P474 469 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 ANKRD35Q8N283 1001 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 GPRC5AQ8NFJ5 357 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 ERMNQ8TAM6 284 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 SMCR8Q8TEV9 937 aaPredicted RBP7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 UBXN4Q92575 508 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 DHX58Q96C10 678 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 GPRASP2Q96D09 838 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 MPHOSPH6Q99547 160 aaKnown RBP7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 NT5C3AQ9H0P0 336 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 KIAA1468Q9P260 1216 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 ADD3Q9UEY8 706 aaKnown RBP7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 TUBE1Q9UJT0 475 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 ADGRA2Q96PE1 1338 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 TMEM88BA6NKF7 163 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 PSMD10O75832 226 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 GCKP35557 465 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 STAT6P42226 847 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 RAB27AP51159 221 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 MRPS9P82933 396 aaKnown RBP7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 MDM2Q00987 491 aaPredicted RBP7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 TYRO3Q06418 890 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 SPIRE1Q08AE8 756 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 SREBF2Q12772 1141 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 LRMPQ12912 555 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 PPP2R5CQ13362 524 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 MCM6Q14566 821 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 POSTNQ15063 836 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 STX1AQ16623 288 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 TMEM119Q4V9L6 283 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 HAUS3Q68CZ6 603 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 FOXR1Q6PIV2 292 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 NLRX1Q86UT6 975 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 VSIG10LQ86VR7 867 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 ABRAQ8N0Z2 381 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 IL31RAQ8NI17 732 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 CDHR1Q96JP9 859 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 TXNRD2Q9NNW7 524 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 VAV3Q9UKW4 847 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 BLOC1S6Q9UL45 172 aa7.98□□□□□ -1.13
SMARCE1-211ENST00000493660 MGAMO43451 1857 aa7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 UTRNP46939 3433 aa7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 DNAJC25-GNG10A0A024R161 153 aa7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 POTEB2H3BUK9 544 aa7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 SASH3O75995 380 aa7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 ECEL1O95672 775 aa7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 NR3C2P08235 984 aa7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 EIF2AK2P19525 551 aaKnown RBP7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 SLC8A3P57103 927 aa7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 KARSQ15046 597 aaKnown RBP7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 FAM110CQ1W6H9 321 aa7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 NT5DC1Q5TFE4 455 aa7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 CKAP2LQ8IYA6 745 aa7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 PDILTQ8N807 584 aa7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 FAM133AQ8N9E0 248 aa7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 TRIML1Q8N9V2 468 aa7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 ACRBPQ8NEB7 543 aa7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 RASSF8Q8NHQ8 419 aa7.97□□□□□ -1.13
SMARCE1-211ENST00000493660 NEK9Q8TD19 979 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms