RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 STAG3L1P0CL83 205 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 DEFB103AP81534 67 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 MRPS5P82675 430 aaKnown RBP15.37■□□□□ 0.05
IRF1-210ENST00000493208 CDC42EP1Q00587 391 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 PAK2Q13177 524 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 TRIM29Q14134 588 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 HIC1Q14526 733 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 MBTPS1Q14703 1052 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 GPNMBQ14956 572 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 SWSAP1Q6NVH7 229 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 ABHD15Q6UXT9 468 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 DAGLBQ8NCG7 672 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 TOP1MTQ969P6 601 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 MAP7D2Q96T17 732 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 COG5Q9UP83 839 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 CDY2AQ9Y6F7 541 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 STK36Q9NRP7 1315 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 IGLV3-22A0A075B6J6 115 aa15.36■□□□□ 0.05
IRF1-210ENST00000493208 GHRP10912 638 aa15.36■□□□□ 0.05
IRF1-210ENST00000493208 GCFC2P16383 781 aaKnown RBP15.36■□□□□ 0.05
IRF1-210ENST00000493208 ERVK-21P61565 698 aa15.36■□□□□ 0.05
IRF1-210ENST00000493208 LRCH2Q5VUJ6 765 aa15.36■□□□□ 0.05
IRF1-210ENST00000493208 FAM117BQ6P1L5 589 aa15.36■□□□□ 0.05
IRF1-210ENST00000493208 MTHFD1LQ6UB35 978 aa15.36■□□□□ 0.05
IRF1-210ENST00000493208 TBCKQ8TEA7 893 aa15.36■□□□□ 0.05
IRF1-210ENST00000493208 CRYGNQ8WXF5 182 aa15.36■□□□□ 0.05
IRF1-210ENST00000493208 IL17RAQ96F46 866 aa15.36■□□□□ 0.05
IRF1-210ENST00000493208 LAMA2P24043 3122 aaKnown RBP15.35■□□□□ 0.05
IRF1-210ENST00000493208 SCN5AQ14524 2016 aa15.35■□□□□ 0.05
IRF1-210ENST00000493208 GPR182O15218 404 aa15.35■□□□□ 0.05
IRF1-210ENST00000493208 UPP2O95045 317 aa15.35■□□□□ 0.05
IRF1-210ENST00000493208 CHRNA1P02708 482 aa15.35■□□□□ 0.05
IRF1-210ENST00000493208 CCDC85BQ15834 202 aaPredicted RBP15.35■□□□□ 0.05
IRF1-210ENST00000493208 Q4G0T1 1027 aa15.35■□□□□ 0.05
IRF1-210ENST00000493208 FBXO47Q5MNV8 452 aa15.35■□□□□ 0.05
IRF1-210ENST00000493208 RUFY4Q6ZNE9 571 aa15.35■□□□□ 0.05
IRF1-210ENST00000493208 EXOC8Q8IYI6 725 aa15.35■□□□□ 0.05
IRF1-210ENST00000493208 FIBCD1Q8N539 461 aa15.35■□□□□ 0.05
IRF1-210ENST00000493208 FBXO22Q8NEZ5 403 aa15.35■□□□□ 0.05
IRF1-210ENST00000493208 JPH2Q9BR39 696 aaPredicted RBP15.35■□□□□ 0.05
IRF1-210ENST00000493208 CELF4Q9BZC1 486 aaKnown RBP15.35■□□□□ 0.05
IRF1-210ENST00000493208 CERS4Q9HA82 394 aa15.35■□□□□ 0.05
IRF1-210ENST00000493208 DISC1Q9NRI5 854 aa15.35■□□□□ 0.05
IRF1-210ENST00000493208 LRFN2Q9ULH4 789 aa15.35■□□□□ 0.05
IRF1-210ENST00000493208 MAFBQ9Y5Q3 323 aaPredicted RBP15.35■□□□□ 0.05
IRF1-210ENST00000493208 KDM3AQ9Y4C1 1321 aa15.35■□□□□ 0.05
IRF1-210ENST00000493208 TRIP12Q14669 1992 aaPredicted RBP15.35■□□□□ 0.05
IRF1-210ENST00000493208 LINC01553A4QN01 128 aa15.34■□□□□ 0.05
IRF1-210ENST00000493208 PFKFB2O60825 505 aa15.34■□□□□ 0.05
IRF1-210ENST00000493208 BAG4O95429 457 aaKnown RBP15.34■□□□□ 0.05
IRF1-210ENST00000493208 CCNE2O96020 404 aa15.34■□□□□ 0.05
IRF1-210ENST00000493208 KLRC1P26715 233 aa15.34■□□□□ 0.05
IRF1-210ENST00000493208 HTRA4P83105 476 aaPredicted RBP15.34■□□□□ 0.05
IRF1-210ENST00000493208 MGAT3Q09327 533 aa15.34■□□□□ 0.05
IRF1-210ENST00000493208 ADGRE1Q14246 886 aa15.34■□□□□ 0.05
IRF1-210ENST00000493208 LPIN1Q14693 890 aa15.34■□□□□ 0.05
IRF1-210ENST00000493208 MARCH8Q5T0T0 291 aa15.34■□□□□ 0.05
IRF1-210ENST00000493208 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.34■□□□□ 0.05
IRF1-210ENST00000493208 CCDC60Q8IWA6 550 aaPredicted RBP15.34■□□□□ 0.05
IRF1-210ENST00000493208 METTL13Q8N6R0 699 aa15.34■□□□□ 0.05
IRF1-210ENST00000493208 PCYT2Q99447 389 aa15.34■□□□□ 0.05
IRF1-210ENST00000493208 GABBR1Q9UBS5 961 aa15.34■□□□□ 0.05
IRF1-210ENST00000493208 MTCH2Q9Y6C9 303 aa15.34■□□□□ 0.05
IRF1-210ENST00000493208 KAT6AQ92794 2004 aa15.34■□□□□ 0.05
IRF1-210ENST00000493208 DHX15O43143 795 aaKnown RBP15.33■□□□□ 0.04
IRF1-210ENST00000493208 RPS6KA5O75582 802 aa15.33■□□□□ 0.04
IRF1-210ENST00000493208 RB1P06400 928 aa15.33■□□□□ 0.04
IRF1-210ENST00000493208 DNM2P50570 870 aa15.33■□□□□ 0.04
IRF1-210ENST00000493208 TIGD5Q53EQ6 642 aa15.33■□□□□ 0.04
IRF1-210ENST00000493208 MIER3Q7Z3K6 550 aa15.33■□□□□ 0.04
IRF1-210ENST00000493208 SP7Q8TDD2 431 aaPredicted RBP15.33■□□□□ 0.04
IRF1-210ENST00000493208 RASGRP4Q8TDF6 673 aa15.33■□□□□ 0.04
IRF1-210ENST00000493208 PPP2R3CQ969Q6 453 aa15.33■□□□□ 0.04
IRF1-210ENST00000493208 SCLT1Q96NL6 688 aa15.33■□□□□ 0.04
IRF1-210ENST00000493208 C11orf84Q9BUA3 381 aaPredicted RBP15.33■□□□□ 0.04
IRF1-210ENST00000493208 C1orf112Q9NSG2 853 aa15.33■□□□□ 0.04
IRF1-210ENST00000493208 DDX25Q9UHL0 483 aaKnown RBP15.33■□□□□ 0.04
IRF1-210ENST00000493208 MTUS1Q9ULD2 1270 aa15.33■□□□□ 0.04
IRF1-210ENST00000493208 GINS2Q9Y248 185 aa15.33■□□□□ 0.04
IRF1-210ENST00000493208 IGSF9BQ9UPX0 1349 aa15.33■□□□□ 0.04
IRF1-210ENST00000493208 COL6A3P12111 3177 aa15.32■□□□□ 0.04
IRF1-210ENST00000493208 CYP3A7-CYP3A51PA0A087WV96 503 aa15.32■□□□□ 0.04
IRF1-210ENST00000493208 DENND3A2RUS2 1198 aa15.32■□□□□ 0.04
IRF1-210ENST00000493208 PPFIA3O75145 1194 aa15.32■□□□□ 0.04
IRF1-210ENST00000493208 OATP04181 439 aa15.32■□□□□ 0.04
IRF1-210ENST00000493208 CYP3A7P24462 503 aa15.32■□□□□ 0.04
IRF1-210ENST00000493208 SCRN1Q12765 414 aa15.32■□□□□ 0.04
IRF1-210ENST00000493208 GRB10Q13322 594 aa15.32■□□□□ 0.04
IRF1-210ENST00000493208 SAFBQ15424 915 aaKnown RBP eCLIP15.32■□□□□ 0.04
IRF1-210ENST00000493208 NEK8Q86SG6 692 aa15.32■□□□□ 0.04
IRF1-210ENST00000493208 NPAS4Q8IUM7 802 aa15.32■□□□□ 0.04
IRF1-210ENST00000493208 SLC5A5Q92911 643 aa15.32■□□□□ 0.04
IRF1-210ENST00000493208 HLA-CQ95604 372 aa15.32■□□□□ 0.04
IRF1-210ENST00000493208 FAM20AQ96MK3 541 aa15.32■□□□□ 0.04
IRF1-210ENST00000493208 ASB2Q96Q27 587 aa15.32■□□□□ 0.04
IRF1-210ENST00000493208 ORC3Q9UBD5 711 aaPredicted RBP15.32■□□□□ 0.04
IRF1-210ENST00000493208 TELO2Q9Y4R8 837 aa15.32■□□□□ 0.04
IRF1-210ENST00000493208 LCHNA4D1U4 455 aa15.31■□□□□ 0.04
IRF1-210ENST00000493208 TBX3O15119 743 aa15.31■□□□□ 0.04
IRF1-210ENST00000493208 MSH4O15457 936 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms