RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 SH3BP5LQ7L8J4 393 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 IQCKQ8N0W5 287 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 CASKIN2Q8WXE0 1202 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 SPAG5Q96R06 1193 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 CAPS2Q9BXY5 557 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 BCAS3Q9H6U6 928 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 KCNQ5Q9NR82 932 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 FAM198AQ9UFP1 575 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 VAV3Q9UKW4 847 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 ASTN1O14525 1302 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 GRIN2DO15399 1336 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 CES2O00748 559 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 CLSTN1O94985 981 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 PRKCIP41743 596 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 MMP14P50281 582 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 RNASE9P60153 205 aaKnown RBP17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 SLC27A3Q5K4L6 730 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 TATDN1Q6P1N9 297 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 MREGQ8N565 214 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 LRRC57Q8N9N7 239 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 IFT81Q8WYA0 676 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 FAM20AQ96MK3 541 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 SIX2Q9NPC8 291 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 PI4KBQ9UBF8 816 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 NAGPAQ9UK23 515 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 AJAP1Q9UKB5 411 aaPredicted RBP17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 NENFQ9UMX5 172 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 F5H6K3 240 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 MSH4O15457 936 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 ONECUT3O60422 494 aaPredicted RBP17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 NR3C1P04150 777 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 CIITAP33076 1130 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 ICA1Q05084 483 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 KLRC3Q07444 240 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 USH1GQ495M9 461 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 FBXO11Q86XK2 927 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 CCDC43Q96MW1 224 aaKnown RBP17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 RUFY1Q96T51 708 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 RUSC1Q9BVN2 902 aa17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 TYW1Q9NV66 732 aaKnown RBP17.66■□□□□ 0.42
SEMA4D-220ENST00000492386 SPDYE3A6NKU9 549 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 OPLAHO14841 1288 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 FOSP01100 380 aaPredicted RBP17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 TAL1P17542 331 aaPredicted RBP17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 CASP4P49662 377 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 JAM2P57087 298 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 CORO7P57737 925 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 SKOR1P84550 965 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 RPS6KA1Q15418 735 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 TRADDQ15628 312 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 DCAF17Q5H9S7 520 aaPredicted RBP17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 SEPT12Q8IYM1 358 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 PIK3R5Q8WYR1 880 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 SLC35C1Q96A29 364 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 BHMT2Q9H2M3 363 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 FBXL5Q9UKA1 691 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 STK24Q9Y6E0 443 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 ZNF233A6NK53 670 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 EIF3HO15372 352 aaKnown RBP eCLIP17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 SLC16A3O15427 465 aaKnown RBP17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 RAD51CO43502 376 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 KIF4AO95239 1232 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 ZBTB48P10074 688 aaPredicted RBP17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 NPR1P16066 1061 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 CYP4A11Q02928 519 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 DNAAF5Q86Y56 855 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 GMCL1P1Q8NEA9 526 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 CYP2W1Q8TAV3 490 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 TAF4BQ92750 862 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 GMCL1Q96IK5 515 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 IDI2Q9BXS1 227 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 GOLPH3Q9H4A6 298 aa17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 COL11A2P13942 1736 aaPredicted RBP17.65■□□□□ 0.42
SEMA4D-220ENST00000492386 SMCHD1A6NHR9 2005 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 KCNK3O14649 394 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 NDUFB10O96000 172 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 KRT14P02533 472 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 GNGT1P63211 74 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 TNNC1P63316 161 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 KCNA1Q09470 495 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 DNAJC21Q5F1R6 531 aaKnown RBP17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 CFAP58Q5T655 872 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 ALKBH5Q6P6C2 394 aaKnown RBP17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 TMEM179Q6ZVK1 233 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 POLR3CQ9BUI4 534 aaPredicted RBP17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 METTL14Q9HCE5 456 aaKnown RBP17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 POLD4Q9HCU8 107 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 G3V3G9 751 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 EML1O00423 815 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 GUCY2FP51841 1108 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 SF3B2Q13435 895 aaKnown RBP17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 DCAF8Q5TAQ9 597 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 SYDE2Q5VT97 1194 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 KIAA0825Q8IV33 1275 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 DBNDD1Q9H9R9 158 aa17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 ZNF646O15015 1829 aaPredicted RBP17.64■□□□□ 0.41
SEMA4D-220ENST00000492386 ATP8B3O60423 1300 aa17.63■□□□□ 0.41
SEMA4D-220ENST00000492386 EP400Q96L91 3159 aa17.63■□□□□ 0.41
SEMA4D-220ENST00000492386 SCN9AQ15858 1988 aa17.63■□□□□ 0.41
SEMA4D-220ENST00000492386 GDF11O95390 407 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms