RNA–Protein interactions for RNA: ENST00000492337.5

SOX2-OT-213, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 2,508 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-213ENST00000492337 SIX2Q9NPC8 291 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 ARMCX3Q9UH62 379 aaPredicted RBP11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 NAGPAQ9UK23 515 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 INTUQ9ULD6 942 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 PACSIN2Q9UNF0 486 aaPredicted RBP11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 STK24Q9Y6E0 443 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 UBR3Q6ZT12 1888 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 GTPBP10A4D1E9 387 aaKnown RBP11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 POTEFA5A3E0 1075 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 SLC16A3O15427 465 aaKnown RBP11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 POTEIP0CG38 1075 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 ACTN1P12814 892 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 SLC9A1P19634 815 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 STAT3P40763 770 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 MMP14P50281 582 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 POTEGQ6S5H5 508 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 POTEEQ6S8J3 1075 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 RASGEF1CQ8N431 466 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 KCTD17Q8N5Z5 321 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 P2RX7Q99572 595 aaKnown RBP11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 STXBP5LQ9Y2K9 1186 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 FAM169AQ9Y6X4 670 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 SIPA1L1O43166 1804 aa11.06□□□□□ -0.64
SOX2-OT-213ENST00000492337 ANKRD65E5RJM6 399 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 EPS15P42566 896 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 NPEPPSP55786 919 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 ERVK-9P63128 1117 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 ARID5AQ03989 594 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 CUL1Q13616 776 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 EXOC3L4Q17RC7 722 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 HHIPL2Q6UWX4 724 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 SP8Q8IXZ3 490 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 SH2D3CQ8N5H7 860 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 TPCN2Q8NHX9 752 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 OLIG1Q8TAK6 271 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 ATP6V1G3Q96LB4 118 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 REEP2Q9BRK0 252 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 DNAJC18Q9H819 358 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 METTL14Q9HCE5 456 aaKnown RBP11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 TYW1Q9NV66 732 aaKnown RBP11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 USP40Q9NVE5 1235 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 NYAP2Q9P242 653 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 PCDHA1Q9Y5I3 950 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 HMGB1P1B2RPK0 211 aaPredicted RBP11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 H0YGN5 161 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 CALUO43852 315 aaPredicted RBP11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 CIITAP33076 1130 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 PSMC6P62333 389 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 ARHGAP4P98171 946 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 PDCLQ13371 301 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 TRADDQ15628 312 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 NFIL3Q16649 462 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 APOBEC3HQ6NTF7 200 aaKnown RBP11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 CDC42EP5Q6NZY7 148 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 ALKBH5Q6P6C2 394 aaKnown RBP11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 SFR1Q86XK3 245 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 SPATS2Q86XZ4 545 aaKnown RBP11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 IFT81Q8WYA0 676 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 TAF4BQ92750 862 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 BORCS6Q96GS4 357 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 RNPC3Q96LT9 517 aaKnown RBP11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 NFS1Q9Y697 457 aa11.05□□□□□ -0.64
SOX2-OT-213ENST00000492337 ASTN1O14525 1302 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 C6orf229H3BNL8 230 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 KCNK3O14649 394 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 FLOT1O75955 427 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 AKAP3O75969 853 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 GFPT2O94808 682 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 HLA-DOAP06340 250 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 ITGB3BPQ13352 177 aaPredicted RBP11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 ERMNQ8TAM6 284 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 SEC14L1Q92503 715 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 SLC35C1Q96A29 364 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 FAM20AQ96MK3 541 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 TMBIM4Q9HC24 238 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 LRRC4BQ9NT99 713 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 SUCLA2Q9P2R7 463 aaPredicted RBP11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 DNM3Q9UQ16 869 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 CCDC188H7C350 402 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 KRT18P05783 430 aaKnown RBP11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 XRCC5P13010 732 aaKnown RBP11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 NR1D1P20393 614 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 LSP1P33241 339 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 SREBF1P36956 1147 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 GUCY2FP51841 1108 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 SLC15A2Q16348 729 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 SPAG5Q96R06 1193 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 POLR3CQ9BUI4 534 aaPredicted RBP11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 EPN3Q9H201 632 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 OLFML3Q9NRN5 406 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 ADAMTSL1Q8N6G6 1762 aa11.04□□□□□ -0.64
SOX2-OT-213ENST00000492337 PGRMC1O00264 195 aaKnown RBP11.03□□□□□ -0.64
SOX2-OT-213ENST00000492337 KCTD16Q68DU8 428 aa11.03□□□□□ -0.64
SOX2-OT-213ENST00000492337 B4GALNT4Q76KP1 1039 aa11.03□□□□□ -0.64
SOX2-OT-213ENST00000492337 METTL13Q8N6R0 699 aa11.03□□□□□ -0.64
SOX2-OT-213ENST00000492337 SLC30A5Q8TAD4 765 aa11.03□□□□□ -0.64
SOX2-OT-213ENST00000492337 AJAP1Q9UKB5 411 aaPredicted RBP11.03□□□□□ -0.64
SOX2-OT-213ENST00000492337 VAV3Q9UKW4 847 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms