RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 TRAPPC12Q8WVT3 735 aa17.46■□□□□ 0.39
MRPL55-231ENST00000492170 LMAN2LQ9H0V9 348 aa17.46■□□□□ 0.39
MRPL55-231ENST00000492170 SMIM35A0A1B0GVV1 85 aa17.45■□□□□ 0.38
MRPL55-231ENST00000492170 DDX39AO00148 427 aaKnown RBP17.45■□□□□ 0.38
MRPL55-231ENST00000492170 SCG2P13521 617 aa17.45■□□□□ 0.38
MRPL55-231ENST00000492170 BMPR1AP36894 532 aa17.45■□□□□ 0.38
MRPL55-231ENST00000492170 TMEM62Q0P6H9 643 aa17.45■□□□□ 0.38
MRPL55-231ENST00000492170 PAK2Q13177 524 aa17.45■□□□□ 0.38
MRPL55-231ENST00000492170 JAKMIP3Q5VZ66 844 aa17.45■□□□□ 0.38
MRPL55-231ENST00000492170 MCTP2Q6DN12 878 aa17.45■□□□□ 0.38
MRPL55-231ENST00000492170 PTCRAQ6ISU1 281 aaPredicted RBP17.45■□□□□ 0.38
MRPL55-231ENST00000492170 PLA2G4DQ86XP0 818 aa17.45■□□□□ 0.38
MRPL55-231ENST00000492170 NME8Q8N427 588 aa17.45■□□□□ 0.38
MRPL55-231ENST00000492170 CCDC12Q8WUD4 166 aaPredicted RBP17.45■□□□□ 0.38
MRPL55-231ENST00000492170 LINC01599Q8WXQ3 324 aa17.45■□□□□ 0.38
MRPL55-231ENST00000492170 CLP1Q92989 425 aaKnown RBP17.45■□□□□ 0.38
MRPL55-231ENST00000492170 ZNF689Q96CS4 500 aaPredicted RBP17.45■□□□□ 0.38
MRPL55-231ENST00000492170 PABPC5Q96DU9 382 aaKnown RBP17.45■□□□□ 0.38
MRPL55-231ENST00000492170 CELF4Q9BZC1 486 aaKnown RBP17.45■□□□□ 0.38
MRPL55-231ENST00000492170 EPHX3Q9H6B9 360 aa17.45■□□□□ 0.38
MRPL55-231ENST00000492170 RAPGEFL1Q9UHV5 662 aa17.45■□□□□ 0.38
MRPL55-231ENST00000492170 TTC3P53804 2025 aa17.45■□□□□ 0.38
MRPL55-231ENST00000492170 IGSF9BQ9UPX0 1349 aa17.45■□□□□ 0.38
MRPL55-231ENST00000492170 IGKV6D-21A0A0A0MT36 114 aa17.44■□□□□ 0.38
MRPL55-231ENST00000492170 ESYT2A0FGR8 921 aa17.44■□□□□ 0.38
MRPL55-231ENST00000492170 HBP1O60381 514 aa17.44■□□□□ 0.38
MRPL55-231ENST00000492170 DGKIO75912 1065 aa17.44■□□□□ 0.38
MRPL55-231ENST00000492170 CCNE2O96020 404 aa17.44■□□□□ 0.38
MRPL55-231ENST00000492170 LINC00271P0C7V0 271 aa17.44■□□□□ 0.38
MRPL55-231ENST00000492170 ADD1P35611 737 aaKnown RBP17.44■□□□□ 0.38
MRPL55-231ENST00000492170 SETQ01105 290 aaPredicted RBP17.44■□□□□ 0.38
MRPL55-231ENST00000492170 KRT76Q01546 638 aa17.44■□□□□ 0.38
MRPL55-231ENST00000492170 APOBRQ0VD83 1088 aa17.44■□□□□ 0.38
MRPL55-231ENST00000492170 MTHFD1LQ6UB35 978 aa17.44■□□□□ 0.38
MRPL55-231ENST00000492170 EP400NLQ6ZTU2 488 aa17.44■□□□□ 0.38
MRPL55-231ENST00000492170 Q6ZUG5 572 aa17.44■□□□□ 0.38
MRPL55-231ENST00000492170 NPAS4Q8IUM7 802 aa17.44■□□□□ 0.38
MRPL55-231ENST00000492170 NEK9Q8TD19 979 aa17.44■□□□□ 0.38
MRPL55-231ENST00000492170 JAKMIP1Q96N16 626 aaKnown RBP17.44■□□□□ 0.38
MRPL55-231ENST00000492170 C6orf50Q9HD87 102 aa17.44■□□□□ 0.38
MRPL55-231ENST00000492170 PADI3Q9ULW8 664 aa17.44■□□□□ 0.38
MRPL55-231ENST00000492170 KDM3AQ9Y4C1 1321 aa17.44■□□□□ 0.38
MRPL55-231ENST00000492170 FAM86B1E9PN63 330 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 H3BQ06 376 aaPredicted RBP17.43■□□□□ 0.38
MRPL55-231ENST00000492170 NCK2O43639 380 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 CYP3A4P08684 503 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 FAM86B2P0C5J1 330 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 STAG3L1P0CL83 205 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 IL9P15248 144 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 MIS18BP1Q6P0N0 1132 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 PDXDC2PQ6P474 469 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 BLOC1S2Q6QNY1 142 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 ABHD15Q6UXT9 468 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 FAM178BQ8IXR5 827 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 CMTR2Q8IYT2 770 aaKnown RBP17.43■□□□□ 0.38
MRPL55-231ENST00000492170 GJD3Q8N144 294 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 REXO1Q8N1G1 1221 aaKnown RBP17.43■□□□□ 0.38
MRPL55-231ENST00000492170 ATP8B4Q8TF62 1192 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 BRF1Q92994 677 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 PLVAPQ9BX97 442 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 ZMYND12Q9H0C1 365 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 ZNF302Q9NR11 478 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 TCEAL9Q9UHQ7 104 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 FAM50BQ9Y247 325 aa17.43■□□□□ 0.38
MRPL55-231ENST00000492170 COL1A2P08123 1366 aa17.42■□□□□ 0.38
MRPL55-231ENST00000492170 NID2Q14112 1375 aa17.42■□□□□ 0.38
MRPL55-231ENST00000492170 GRXCR2A6NFK2 248 aa17.42■□□□□ 0.38
MRPL55-231ENST00000492170 IPO5O00410 1097 aaKnown RBP17.42■□□□□ 0.38
MRPL55-231ENST00000492170 GRM6O15303 877 aa17.42■□□□□ 0.38
MRPL55-231ENST00000492170 CPA1P15085 419 aa17.42■□□□□ 0.38
MRPL55-231ENST00000492170 KLRC1P26715 233 aa17.42■□□□□ 0.38
MRPL55-231ENST00000492170 SSTR3P32745 418 aaPredicted RBP17.42■□□□□ 0.38
MRPL55-231ENST00000492170 AKAP17AQ02040 695 aaKnown RBP17.42■□□□□ 0.38
MRPL55-231ENST00000492170 COL19A1Q14993 1142 aa17.42■□□□□ 0.38
MRPL55-231ENST00000492170 TMEM31Q5JXX7 168 aa17.42■□□□□ 0.38
MRPL55-231ENST00000492170 CCDC60Q8IWA6 550 aaPredicted RBP17.42■□□□□ 0.38
MRPL55-231ENST00000492170 KCNB2Q92953 911 aa17.42■□□□□ 0.38
MRPL55-231ENST00000492170 ZNF577Q9BSK1 485 aa17.42■□□□□ 0.38
MRPL55-231ENST00000492170 CLDND1Q9NY35 253 aa17.42■□□□□ 0.38
MRPL55-231ENST00000492170 IGLV3-22A0A075B6J6 115 aa17.41■□□□□ 0.38
MRPL55-231ENST00000492170 MMP1P03956 469 aa17.41■□□□□ 0.38
MRPL55-231ENST00000492170 GNA11P29992 359 aa17.41■□□□□ 0.38
MRPL55-231ENST00000492170 HSPA4P34932 840 aa17.41■□□□□ 0.38
MRPL55-231ENST00000492170 ZNF484Q5JVG2 852 aa17.41■□□□□ 0.38
MRPL55-231ENST00000492170 FAM43BQ6ZT52 329 aaPredicted RBP17.41■□□□□ 0.38
MRPL55-231ENST00000492170 RTN4RL1Q86UN2 441 aaPredicted RBP17.41■□□□□ 0.38
MRPL55-231ENST00000492170 CKAP2LQ8IYA6 745 aa17.41■□□□□ 0.38
MRPL55-231ENST00000492170 CRYGNQ8WXF5 182 aa17.41■□□□□ 0.38
MRPL55-231ENST00000492170 KHSRPQ92945 711 aaKnown RBP eCLIP17.41■□□□□ 0.38
MRPL55-231ENST00000492170 LRFN3Q9BTN0 628 aa17.41■□□□□ 0.38
MRPL55-231ENST00000492170 CD320Q9NPF0 282 aa17.41■□□□□ 0.38
MRPL55-231ENST00000492170 TBC1D22BQ9NU19 505 aa17.41■□□□□ 0.38
MRPL55-231ENST00000492170 LRFN2Q9ULH4 789 aa17.41■□□□□ 0.38
MRPL55-231ENST00000492170 GINS2Q9Y248 185 aa17.41■□□□□ 0.38
MRPL55-231ENST00000492170 MRPL42Q9Y6G3 142 aaKnown RBP17.41■□□□□ 0.38
MRPL55-231ENST00000492170 DHX15O43143 795 aaKnown RBP17.4■□□□□ 0.38
MRPL55-231ENST00000492170 PRPF3O43395 683 aaKnown RBP17.4■□□□□ 0.38
MRPL55-231ENST00000492170 CSPG5O95196 566 aa17.4■□□□□ 0.38
MRPL55-231ENST00000492170 NFX1Q12986 1120 aaKnown RBP17.4■□□□□ 0.38
MRPL55-231ENST00000492170 TMEM266Q2M3C6 531 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms