RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 TM6SF1Q9BZW5 370 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 FAM49AQ9H0Q0 323 aaPredicted RBP9.39□□□□□ -0.91
LSM2-213ENST00000491421 PPP4R2Q9NY27 417 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 VPS54Q9P1Q0 977 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 TCEAL9Q9UHQ7 104 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 CDY2AQ9Y6F7 541 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 XIRP2A4UGR9 3374 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 GBF1Q92538 1859 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 IGKV6D-21A0A0A0MT36 114 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 M0QZ92 97 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 DHX15O43143 795 aaKnown RBP9.38□□□□□ -0.91
LSM2-213ENST00000491421 LPXNO60711 386 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 NLRP5P59047 1200 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 SSRP1Q08945 709 aaKnown RBP9.38□□□□□ -0.91
LSM2-213ENST00000491421 PRR16Q569H4 304 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 FBXO47Q5MNV8 452 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 IER5Q5VY09 327 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 SWSAP1Q6NVH7 229 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 PDXDC2PQ6P474 469 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 ABHD15Q6UXT9 468 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 CCDC60Q8IWA6 550 aaPredicted RBP9.38□□□□□ -0.91
LSM2-213ENST00000491421 FBXO22Q8NEZ5 403 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 SP7Q8TDD2 431 aaPredicted RBP9.38□□□□□ -0.91
LSM2-213ENST00000491421 TRAPPC12Q8WVT3 735 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 TOP1MTQ969P6 601 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 ZNF274Q96GC6 653 aaPredicted RBP9.38□□□□□ -0.91
LSM2-213ENST00000491421 LARP6Q9BRS8 491 aaKnown RBP9.38□□□□□ -0.91
LSM2-213ENST00000491421 C17orf80Q9BSJ5 609 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 ZNF302Q9NR11 478 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 SH3GLB2Q9NR46 395 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 TBC1D22BQ9NU19 505 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 PDRG1Q9NUG6 133 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 PCDHA2Q9Y5H9 948 aa9.38□□□□□ -0.91
LSM2-213ENST00000491421 TRIP12Q14669 1992 aaPredicted RBP9.37□□□□□ -0.91
LSM2-213ENST00000491421 TTC28Q96AY4 2481 aa9.37□□□□□ -0.91
LSM2-213ENST00000491421 DOCK5Q9H7D0 1870 aa9.37□□□□□ -0.91
LSM2-213ENST00000491421 HBP1O60381 514 aa9.37□□□□□ -0.91
LSM2-213ENST00000491421 CD52P31358 61 aa9.37□□□□□ -0.91
LSM2-213ENST00000491421 CIITAP33076 1130 aa9.37□□□□□ -0.91
LSM2-213ENST00000491421 KRT76Q01546 638 aa9.37□□□□□ -0.91
LSM2-213ENST00000491421 TMEM62Q0P6H9 643 aa9.37□□□□□ -0.91
LSM2-213ENST00000491421 STK3Q13188 491 aa9.37□□□□□ -0.91
LSM2-213ENST00000491421 AAK1Q2M2I8 961 aa9.37□□□□□ -0.91
LSM2-213ENST00000491421 ZNF746Q6NUN9 644 aaPredicted RBP9.37□□□□□ -0.91
LSM2-213ENST00000491421 CPLX2Q6PUV4 134 aaKnown RBP9.37□□□□□ -0.91
LSM2-213ENST00000491421 MTHFD1LQ6UB35 978 aa9.37□□□□□ -0.91
LSM2-213ENST00000491421 TSHZ1Q6ZSZ6 1077 aa9.37□□□□□ -0.91
LSM2-213ENST00000491421 CKAP2LQ8IYA6 745 aa9.37□□□□□ -0.91
LSM2-213ENST00000491421 SMAP1Q8IYB5 467 aaPredicted RBP9.37□□□□□ -0.91
LSM2-213ENST00000491421 ATP8B4Q8TF62 1192 aa9.37□□□□□ -0.91
LSM2-213ENST00000491421 SUGCTQ9HAC7 445 aa9.37□□□□□ -0.91
LSM2-213ENST00000491421 LMCD1Q9NZU5 365 aa9.37□□□□□ -0.91
LSM2-213ENST00000491421 TRPV2Q9Y5S1 764 aa9.37□□□□□ -0.91
LSM2-213ENST00000491421 SMIM35A0A1B0GVV1 85 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 DEXIO95424 95 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 PSAPP07602 524 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 KLRC1P26715 233 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 TFF2Q03403 129 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 PAK2Q13177 524 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 ZNF484Q5JVG2 852 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 ERICH6BQ5W0A0 696 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 NME8Q8N427 588 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 ADAMTS19Q8TE59 1207 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 LENG9Q96B70 501 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 IL17RAQ96F46 866 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 SAMD11Q96NU1 681 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 CELF4Q9BZC1 486 aaKnown RBP9.36□□□□□ -0.91
LSM2-213ENST00000491421 AGO3Q9H9G7 860 aaKnown RBP9.36□□□□□ -0.91
LSM2-213ENST00000491421 PCDHA4Q9UN74 947 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 COG5Q9UP83 839 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 SAMM50Q9Y512 469 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 PCDHA10Q9Y5I2 948 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 SQORQ9Y6N5 450 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 REV3LO60673 3130 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 COL1A2P08123 1366 aa9.36□□□□□ -0.91
LSM2-213ENST00000491421 IGSF9BQ9UPX0 1349 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 WDR64B1ANS9 1081 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 ENPP3O14638 875 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 MSH4O15457 936 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 CDKL5O76039 1030 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 ATP4AP20648 1035 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 USP11P51784 963 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 PTPROQ16827 1216 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 EPC2Q52LR7 807 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 TRMT1LQ7Z2T5 733 aaKnown RBP9.35□□□□□ -0.91
LSM2-213ENST00000491421 TMEM192Q8IY95 271 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 FAM177A1Q8N128 213 aaPredicted RBP9.35□□□□□ -0.91
LSM2-213ENST00000491421 FIBCD1Q8N539 461 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 TBCKQ8TEA7 893 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 BBXQ8WY36 941 aaPredicted RBP9.35□□□□□ -0.91
LSM2-213ENST00000491421 HLA-CQ95604 372 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 AIFM3Q96NN9 605 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 RIT2Q99578 217 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 FTHL17Q9BXU8 183 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 C22orf23Q9BZE7 217 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 SLKQ9H2G2 1235 aaPredicted RBP9.35□□□□□ -0.91
LSM2-213ENST00000491421 GABBR1Q9UBS5 961 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 GINS2Q9Y248 185 aa9.35□□□□□ -0.91
LSM2-213ENST00000491421 MAFBQ9Y5Q3 323 aaPredicted RBP9.35□□□□□ -0.91
LSM2-213ENST00000491421 PTPRSQ13332 1948 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms