RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 BTG3Q14201 252 aaPredicted RBP18.96■□□□□ 0.63
SRGAP3-209ENST00000490889 TSGA10IPQ3SY00 556 aa18.96■□□□□ 0.63
SRGAP3-209ENST00000490889 IER5Q5VY09 327 aa18.96■□□□□ 0.63
SRGAP3-209ENST00000490889 SDF4Q9BRK5 362 aa18.96■□□□□ 0.63
SRGAP3-209ENST00000490889 IGKV6D-21A0A0A0MT36 114 aa18.95■□□□□ 0.62
SRGAP3-209ENST00000490889 POTEB3A0JP26 581 aa18.95■□□□□ 0.62
SRGAP3-209ENST00000490889 DDX39AO00148 427 aaKnown RBP18.95■□□□□ 0.62
SRGAP3-209ENST00000490889 CSPG5O95196 566 aa18.95■□□□□ 0.62
SRGAP3-209ENST00000490889 CPA1P15085 419 aa18.95■□□□□ 0.62
SRGAP3-209ENST00000490889 CAMK1Q14012 370 aa18.95■□□□□ 0.62
SRGAP3-209ENST00000490889 POTEBQ6S5H4 581 aa18.95■□□□□ 0.62
SRGAP3-209ENST00000490889 EP400NLQ6ZTU2 488 aa18.95■□□□□ 0.62
SRGAP3-209ENST00000490889 C11orf84Q9BUA3 381 aaPredicted RBP18.95■□□□□ 0.62
SRGAP3-209ENST00000490889 CLDND1Q9NY35 253 aa18.95■□□□□ 0.62
SRGAP3-209ENST00000490889 PADI3Q9ULW8 664 aa18.95■□□□□ 0.62
SRGAP3-209ENST00000490889 MRPL42Q9Y6G3 142 aaKnown RBP18.95■□□□□ 0.62
SRGAP3-209ENST00000490889 IGSF9BQ9UPX0 1349 aa18.95■□□□□ 0.62
SRGAP3-209ENST00000490889 FAM86B1E9PN63 330 aa18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 hCG_1984214I3L0E3 225 aa18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 GPR37L1O60883 481 aa18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 FAM86B2P0C5J1 330 aa18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 DLX2Q07687 328 aaPredicted RBP18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 HYAL1Q12794 435 aa18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 AP3B2Q13367 1082 aa18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 CTC1Q2NKJ3 1217 aa18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 MTHFD1LQ6UB35 978 aa18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 CCDC60Q8IWA6 550 aaPredicted RBP18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 TEX2Q8IWB9 1127 aa18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 ZNF713Q8N859 430 aaPredicted RBP18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 CRYGNQ8WXF5 182 aa18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 UIMC1Q96RL1 719 aa18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 CELF4Q9BZC1 486 aaKnown RBP18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 LMAN2LQ9H0V9 348 aa18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 TMX1Q9H3N1 280 aa18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 RWDD3Q9Y3V2 267 aa18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 SQORQ9Y6N5 450 aa18.94■□□□□ 0.62
SRGAP3-209ENST00000490889 IGLV3-22A0A075B6J6 115 aa18.93■□□□□ 0.62
SRGAP3-209ENST00000490889 SMIM35A0A1B0GVV1 85 aa18.93■□□□□ 0.62
SRGAP3-209ENST00000490889 DHX15O43143 795 aaKnown RBP18.93■□□□□ 0.62
SRGAP3-209ENST00000490889 RPLP2P05387 115 aaKnown RBP18.93■□□□□ 0.62
SRGAP3-209ENST00000490889 SSTR3P32745 418 aaPredicted RBP18.93■□□□□ 0.62
SRGAP3-209ENST00000490889 GTF2F1P35269 517 aaKnown RBP eCLIP18.93■□□□□ 0.62
SRGAP3-209ENST00000490889 ADD1P35611 737 aaKnown RBP18.93■□□□□ 0.62
SRGAP3-209ENST00000490889 GATMP50440 423 aa18.93■□□□□ 0.62
SRGAP3-209ENST00000490889 TMEM266Q2M3C6 531 aa18.93■□□□□ 0.62
SRGAP3-209ENST00000490889 PUS10Q3MIT2 529 aaKnown RBP18.93■□□□□ 0.62
SRGAP3-209ENST00000490889 JAKMIP3Q5VZ66 844 aa18.93■□□□□ 0.62
SRGAP3-209ENST00000490889 ABHD15Q6UXT9 468 aa18.93■□□□□ 0.62
SRGAP3-209ENST00000490889 FTHL17Q9BXU8 183 aa18.93■□□□□ 0.62
SRGAP3-209ENST00000490889 ALG13Q9NP73 1137 aaKnown RBP18.93■□□□□ 0.62
SRGAP3-209ENST00000490889 KDM3AQ9Y4C1 1321 aa18.93■□□□□ 0.62
SRGAP3-209ENST00000490889 M0QZ92 97 aa18.92■□□□□ 0.62
SRGAP3-209ENST00000490889 MMP1P03956 469 aa18.92■□□□□ 0.62
SRGAP3-209ENST00000490889 ATP4AP20648 1035 aa18.92■□□□□ 0.62
SRGAP3-209ENST00000490889 DNAJB1P25685 340 aa18.92■□□□□ 0.62
SRGAP3-209ENST00000490889 KLRC1P26715 233 aa18.92■□□□□ 0.62
SRGAP3-209ENST00000490889 PAK2Q13177 524 aa18.92■□□□□ 0.62
SRGAP3-209ENST00000490889 PFKFB3Q16875 520 aaPredicted RBP18.92■□□□□ 0.62
SRGAP3-209ENST00000490889 PAN2Q504Q3 1202 aaKnown RBP18.92■□□□□ 0.62
SRGAP3-209ENST00000490889 NIPA1Q7RTP0 329 aa18.92■□□□□ 0.62
SRGAP3-209ENST00000490889 PLA2G4DQ86XP0 818 aa18.92■□□□□ 0.62
SRGAP3-209ENST00000490889 NPAS4Q8IUM7 802 aa18.92■□□□□ 0.62
SRGAP3-209ENST00000490889 FAM122AQ96E09 287 aa18.92■□□□□ 0.62
SRGAP3-209ENST00000490889 CDHR5Q9HBB8 845 aa18.92■□□□□ 0.62
SRGAP3-209ENST00000490889 PLAGL2Q9UPG8 496 aa18.92■□□□□ 0.62
SRGAP3-209ENST00000490889 ZBTB42B2RXF5 422 aa18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 BACH1O14867 736 aa18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 LINC01565O15544 149 aa18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 MGEA5O60502 916 aa18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 TBX10O75333 385 aa18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 SCG2P13521 617 aa18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 ZNF76P36508 570 aa18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 SLC26A2P50443 739 aa18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 KRT76Q01546 638 aa18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 ZP2Q05996 745 aa18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 APOBRQ0VD83 1088 aa18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 CLUL1Q15846 466 aa18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 CENPQQ7L2Z9 268 aaPredicted RBP18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 CMTR2Q8IYT2 770 aaKnown RBP18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 ATP8B4Q8TF62 1192 aa18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 TMEM40Q8WWA1 233 aa18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 TNPO1Q92973 898 aaKnown RBP18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 PLVAPQ9BX97 442 aa18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 NAP1L2Q9ULW6 460 aaPredicted RBP18.91■□□□□ 0.62
SRGAP3-209ENST00000490889 HBP1O60381 514 aa18.9■□□□□ 0.62
SRGAP3-209ENST00000490889 CDC45O75419 566 aa18.9■□□□□ 0.62
SRGAP3-209ENST00000490889 ITGB1P05556 798 aa18.9■□□□□ 0.62
SRGAP3-209ENST00000490889 CYP3A4P08684 503 aa18.9■□□□□ 0.62
SRGAP3-209ENST00000490889 METAP2P50579 478 aaKnown RBP eCLIP18.9■□□□□ 0.62
SRGAP3-209ENST00000490889 RCAN1P53805 252 aa18.9■□□□□ 0.62
SRGAP3-209ENST00000490889 KRT32Q14532 448 aa18.9■□□□□ 0.62
SRGAP3-209ENST00000490889 PKN1Q16512 942 aa18.9■□□□□ 0.62
SRGAP3-209ENST00000490889 KIAA0319LQ8IZA0 1049 aa18.9■□□□□ 0.62
SRGAP3-209ENST00000490889 NME8Q8N427 588 aa18.9■□□□□ 0.62
SRGAP3-209ENST00000490889 P2RX5Q93086 422 aa18.9■□□□□ 0.62
SRGAP3-209ENST00000490889 GLT8D2Q9H1C3 349 aa18.9■□□□□ 0.62
SRGAP3-209ENST00000490889 ERVK-5Q9HDB9 667 aa18.9■□□□□ 0.62
SRGAP3-209ENST00000490889 ZNF302Q9NR11 478 aa18.9■□□□□ 0.62
SRGAP3-209ENST00000490889 GINS2Q9Y248 185 aa18.9■□□□□ 0.62
SRGAP3-209ENST00000490889 NOC2LQ9Y3T9 749 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms