RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 PSMA5P28066 241 aa22.42■■□□□ 1.18
SREBF1-216ENST00000490796 GNA11P29992 359 aa22.42■■□□□ 1.18
SREBF1-216ENST00000490796 PAK2Q13177 524 aa22.42■■□□□ 1.18
SREBF1-216ENST00000490796 BTG3Q14201 252 aaPredicted RBP22.42■■□□□ 1.18
SREBF1-216ENST00000490796 REXO1Q8N1G1 1221 aaKnown RBP22.42■■□□□ 1.18
SREBF1-216ENST00000490796 NME8Q8N427 588 aa22.42■■□□□ 1.18
SREBF1-216ENST00000490796 C11orf84Q9BUA3 381 aaPredicted RBP22.42■■□□□ 1.18
SREBF1-216ENST00000490796 SMIM35A0A1B0GVV1 85 aa22.41■■□□□ 1.18
SREBF1-216ENST00000490796 HBP1O60381 514 aa22.41■■□□□ 1.18
SREBF1-216ENST00000490796 REC8O95072 547 aa22.41■■□□□ 1.18
SREBF1-216ENST00000490796 ATG7O95352 703 aa22.41■■□□□ 1.18
SREBF1-216ENST00000490796 RB1P06400 928 aa22.41■■□□□ 1.18
SREBF1-216ENST00000490796 PDXDC2PQ6P474 469 aa22.41■■□□□ 1.18
SREBF1-216ENST00000490796 CKAP2LQ8IYA6 745 aa22.41■■□□□ 1.18
SREBF1-216ENST00000490796 BICD2Q8TD16 824 aa22.41■■□□□ 1.18
SREBF1-216ENST00000490796 ZNF577Q9BSK1 485 aa22.41■■□□□ 1.18
SREBF1-216ENST00000490796 CELF4Q9BZC1 486 aaKnown RBP22.41■■□□□ 1.18
SREBF1-216ENST00000490796 AGO3Q9H9G7 860 aaKnown RBP22.41■■□□□ 1.18
SREBF1-216ENST00000490796 ZNF302Q9NR11 478 aa22.41■■□□□ 1.18
SREBF1-216ENST00000490796 SNX14Q9Y5W7 946 aa22.41■■□□□ 1.18
SREBF1-216ENST00000490796 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.4■■□□□ 1.18
SREBF1-216ENST00000490796 ESYT2A0FGR8 921 aa22.4■■□□□ 1.18
SREBF1-216ENST00000490796 FAM86B1E9PN63 330 aa22.4■■□□□ 1.18
SREBF1-216ENST00000490796 IPO5O00410 1097 aaKnown RBP22.4■■□□□ 1.18
SREBF1-216ENST00000490796 FAM86B2P0C5J1 330 aa22.4■■□□□ 1.18
SREBF1-216ENST00000490796 HSPA4P34932 840 aa22.4■■□□□ 1.18
SREBF1-216ENST00000490796 BMPR1AP36894 532 aa22.4■■□□□ 1.18
SREBF1-216ENST00000490796 SETQ01105 290 aaPredicted RBP22.4■■□□□ 1.18
SREBF1-216ENST00000490796 KRT76Q01546 638 aa22.4■■□□□ 1.18
SREBF1-216ENST00000490796 LEXMQ3ZCV2 418 aa22.4■■□□□ 1.18
SREBF1-216ENST00000490796 MTHFD1LQ6UB35 978 aa22.4■■□□□ 1.18
SREBF1-216ENST00000490796 ABHD15Q6UXT9 468 aa22.4■■□□□ 1.18
SREBF1-216ENST00000490796 ATP8B4Q8TF62 1192 aa22.4■■□□□ 1.18
SREBF1-216ENST00000490796 ZMYND12Q9H0C1 365 aa22.4■■□□□ 1.18
SREBF1-216ENST00000490796 NSUN3Q9H649 340 aaKnown RBP22.4■■□□□ 1.18
SREBF1-216ENST00000490796 TBC1D22BQ9NU19 505 aa22.4■■□□□ 1.18
SREBF1-216ENST00000490796 GINS2Q9Y248 185 aa22.4■■□□□ 1.18
SREBF1-216ENST00000490796 PRPF3O43395 683 aaKnown RBP22.39■■□□□ 1.17
SREBF1-216ENST00000490796 CCNE2O96020 404 aa22.39■■□□□ 1.17
SREBF1-216ENST00000490796 CYP3A4P08684 503 aa22.39■■□□□ 1.17
SREBF1-216ENST00000490796 STAG3L1P0CL83 205 aa22.39■■□□□ 1.17
SREBF1-216ENST00000490796 RPS6KB1P23443 525 aa22.39■■□□□ 1.17
SREBF1-216ENST00000490796 KLRC1P26715 233 aa22.39■■□□□ 1.17
SREBF1-216ENST00000490796 SWSAP1Q6NVH7 229 aa22.39■■□□□ 1.17
SREBF1-216ENST00000490796 CCDC148Q8NFR7 591 aa22.39■■□□□ 1.17
SREBF1-216ENST00000490796 KCNB2Q92953 911 aa22.39■■□□□ 1.17
SREBF1-216ENST00000490796 UIMC1Q96RL1 719 aa22.39■■□□□ 1.17
SREBF1-216ENST00000490796 LRFN2Q9ULH4 789 aa22.39■■□□□ 1.17
SREBF1-216ENST00000490796 PADI3Q9ULW8 664 aa22.39■■□□□ 1.17
SREBF1-216ENST00000490796 COL4A6Q14031 1691 aa22.39■■□□□ 1.17
SREBF1-216ENST00000490796 MYO7AQ13402 2215 aa22.38■■□□□ 1.17
SREBF1-216ENST00000490796 IBSPP21815 317 aaPredicted RBP22.38■■□□□ 1.17
SREBF1-216ENST00000490796 NFX1Q12986 1120 aaKnown RBP22.38■■□□□ 1.17
SREBF1-216ENST00000490796 PUS10Q3MIT2 529 aaKnown RBP22.38■■□□□ 1.17
SREBF1-216ENST00000490796 TCEAL5Q5H9L2 206 aa22.38■■□□□ 1.17
SREBF1-216ENST00000490796 ZNF484Q5JVG2 852 aa22.38■■□□□ 1.17
SREBF1-216ENST00000490796 ODR4Q5SWX8 454 aa22.38■■□□□ 1.17
SREBF1-216ENST00000490796 NPAS4Q8IUM7 802 aa22.38■■□□□ 1.17
SREBF1-216ENST00000490796 PHKBQ93100 1093 aa22.38■■□□□ 1.17
SREBF1-216ENST00000490796 LMAN2LQ9H0V9 348 aa22.38■■□□□ 1.17
SREBF1-216ENST00000490796 COL1A2P08123 1366 aa22.38■■□□□ 1.17
SREBF1-216ENST00000490796 IGSF9BQ9UPX0 1349 aa22.37■■□□□ 1.17
SREBF1-216ENST00000490796 TTC3P53804 2025 aa22.37■■□□□ 1.17
SREBF1-216ENST00000490796 IGKV6D-21A0A0A0MT36 114 aa22.37■■□□□ 1.17
SREBF1-216ENST00000490796 DGKIO75912 1065 aa22.37■■□□□ 1.17
SREBF1-216ENST00000490796 PTCRAQ6ISU1 281 aaPredicted RBP22.37■■□□□ 1.17
SREBF1-216ENST00000490796 CCDC60Q8IWA6 550 aaPredicted RBP22.37■■□□□ 1.17
SREBF1-216ENST00000490796 SLC26A6Q9BXS9 759 aa22.37■■□□□ 1.17
SREBF1-216ENST00000490796 FAM50BQ9Y247 325 aa22.37■■□□□ 1.17
SREBF1-216ENST00000490796 KDM3AQ9Y4C1 1321 aa22.36■■□□□ 1.17
SREBF1-216ENST00000490796 C5orf67F2Z3F1 127 aa22.36■■□□□ 1.17
SREBF1-216ENST00000490796 NCK2O43639 380 aa22.36■■□□□ 1.17
SREBF1-216ENST00000490796 PSAPP07602 524 aa22.36■■□□□ 1.17
SREBF1-216ENST00000490796 PRR16Q569H4 304 aa22.36■■□□□ 1.17
SREBF1-216ENST00000490796 ZNF746Q6NUN9 644 aaPredicted RBP22.36■■□□□ 1.17
SREBF1-216ENST00000490796 TRMT1LQ7Z2T5 733 aaKnown RBP22.36■■□□□ 1.17
SREBF1-216ENST00000490796 CLP1Q92989 425 aaKnown RBP22.36■■□□□ 1.17
SREBF1-216ENST00000490796 PABPC5Q96DU9 382 aaKnown RBP22.36■■□□□ 1.17
SREBF1-216ENST00000490796 PLVAPQ9BX97 442 aa22.36■■□□□ 1.17
SREBF1-216ENST00000490796 RNF26Q9BY78 433 aaPredicted RBP22.36■■□□□ 1.17
SREBF1-216ENST00000490796 RNF216Q9NWF9 866 aaPredicted RBP22.36■■□□□ 1.17
SREBF1-216ENST00000490796 SAMM50Q9Y512 469 aa22.36■■□□□ 1.17
SREBF1-216ENST00000490796 NLRC5Q86WI3 1866 aa22.36■■□□□ 1.17
SREBF1-216ENST00000490796 IGLV3-22A0A075B6J6 115 aa22.35■■□□□ 1.17
SREBF1-216ENST00000490796 H3BQ06 376 aaPredicted RBP22.35■■□□□ 1.17
SREBF1-216ENST00000490796 DHX15O43143 795 aaKnown RBP22.35■■□□□ 1.17
SREBF1-216ENST00000490796 PPFIA3O75145 1194 aa22.35■■□□□ 1.17
SREBF1-216ENST00000490796 RPS6KA5O75582 802 aa22.35■■□□□ 1.17
SREBF1-216ENST00000490796 SSTR3P32745 418 aaPredicted RBP22.35■■□□□ 1.17
SREBF1-216ENST00000490796 CCT2P78371 535 aaKnown RBP22.35■■□□□ 1.17
SREBF1-216ENST00000490796 PKN1Q16512 942 aa22.35■■□□□ 1.17
SREBF1-216ENST00000490796 TMEM266Q2M3C6 531 aa22.35■■□□□ 1.17
SREBF1-216ENST00000490796 SMAP1Q8IYB5 467 aaPredicted RBP22.35■■□□□ 1.17
SREBF1-216ENST00000490796 CMTR2Q8IYT2 770 aaKnown RBP22.35■■□□□ 1.17
SREBF1-216ENST00000490796 FBXL16Q8N461 479 aa22.35■■□□□ 1.17
SREBF1-216ENST00000490796 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.35■■□□□ 1.17
SREBF1-216ENST00000490796 LINC01599Q8WXQ3 324 aa22.35■■□□□ 1.17
SREBF1-216ENST00000490796 ZNF689Q96CS4 500 aaPredicted RBP22.35■■□□□ 1.17
SREBF1-216ENST00000490796 CLDND1Q9NY35 253 aa22.35■■□□□ 1.17
SREBF1-216ENST00000490796 RALGAPA2Q2PPJ7 1873 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms