RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 GFRA3O60609 400 aa13.44□□□□□ -0.26
ACTN4-206ENST00000489451 DGKIO75912 1065 aa13.44□□□□□ -0.26
ACTN4-206ENST00000489451 ATG7O95352 703 aa13.44□□□□□ -0.26
ACTN4-206ENST00000489451 CTNNB1P35222 781 aa13.44□□□□□ -0.26
ACTN4-206ENST00000489451 SREBF1P36956 1147 aa13.44□□□□□ -0.26
ACTN4-206ENST00000489451 NAPAP54920 295 aa13.44□□□□□ -0.26
ACTN4-206ENST00000489451 TMEM62Q0P6H9 643 aa13.44□□□□□ -0.26
ACTN4-206ENST00000489451 RTN1Q16799 776 aa13.44□□□□□ -0.26
ACTN4-206ENST00000489451 TSGA10IPQ3SY00 556 aa13.44□□□□□ -0.26
ACTN4-206ENST00000489451 PTCRAQ6ISU1 281 aaPredicted RBP13.44□□□□□ -0.26
ACTN4-206ENST00000489451 POTEBQ6S5H4 581 aa13.44□□□□□ -0.26
ACTN4-206ENST00000489451 FAM49AQ9H0Q0 323 aaPredicted RBP13.44□□□□□ -0.26
ACTN4-206ENST00000489451 TMX1Q9H3N1 280 aa13.44□□□□□ -0.26
ACTN4-206ENST00000489451 EVPLQ92817 2033 aa13.44□□□□□ -0.26
ACTN4-206ENST00000489451 FAM86B1E9PN63 330 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 MEIS1O00470 390 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 ZBTB43O43298 467 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 TRIOO75962 3097 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 FAM86B2P0C5J1 330 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 CPA1P15085 419 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 GTF2F1P35269 517 aaKnown RBP eCLIP13.43□□□□□ -0.265e-6■□□□□ 9.2
ACTN4-206ENST00000489451 BMPR1AP36894 532 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 PTPN5P54829 565 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 DLX2Q07687 328 aaPredicted RBP13.43□□□□□ -0.26
ACTN4-206ENST00000489451 HYAL1Q12794 435 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 PTPROQ16827 1216 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 CTC1Q2NKJ3 1217 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 FNDC1Q4ZHG4 1894 aaPredicted RBP13.43□□□□□ -0.26
ACTN4-206ENST00000489451 CEP55Q53EZ4 464 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 PPP1R18Q6NYC8 613 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 DHX32Q7L7V1 743 aaKnown RBP13.43□□□□□ -0.26
ACTN4-206ENST00000489451 FIBCD1Q8N539 461 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 PABPC5Q96DU9 382 aaKnown RBP13.43□□□□□ -0.26
ACTN4-206ENST00000489451 MFSD14AQ96MC6 490 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 NSUN3Q9H649 340 aaKnown RBP13.43□□□□□ -0.26
ACTN4-206ENST00000489451 RBM28Q9NW13 759 aaKnown RBP13.43□□□□□ -0.26
ACTN4-206ENST00000489451 BARHL2Q9NY43 387 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 PCDHA2Q9Y5H9 948 aa13.43□□□□□ -0.26
ACTN4-206ENST00000489451 V9GY48 417 aaPredicted RBP13.43□□□□□ -0.26
ACTN4-206ENST00000489451 IGSF9BQ9UPX0 1349 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 IGLV3-22A0A075B6J6 115 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 KLF18A0A0U1RQI7 1052 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 RRN3P2A6NIE6 340 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 ZBTB42B2RXF5 422 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 DHX15O43143 795 aaKnown RBP13.42□□□□□ -0.26
ACTN4-206ENST00000489451 EDIL3O43854 480 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 NEFLP07196 543 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 ATP4AP20648 1035 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 DNAJB1P25685 340 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 GATMP50440 423 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 ABHD15Q6UXT9 468 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 CENPQQ7L2Z9 268 aaPredicted RBP13.42□□□□□ -0.26
ACTN4-206ENST00000489451 PLPPR4Q7Z2D5 763 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 ERMP1Q7Z2K6 904 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 RSPH3Q86UC2 560 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 CCDC60Q8IWA6 550 aaPredicted RBP13.42□□□□□ -0.26
ACTN4-206ENST00000489451 CDHR5Q9HBB8 845 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 PADI3Q9ULW8 664 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 TRPV2Q9Y5S1 764 aa13.42□□□□□ -0.26
ACTN4-206ENST00000489451 MRPL42Q9Y6G3 142 aaKnown RBP13.42□□□□□ -0.26
ACTN4-206ENST00000489451 KDM3AQ9Y4C1 1321 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 SMCO2A6NFE2 343 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 GOLGA8AA7E2F4 631 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 GOLGA8BA8MQT2 603 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 DDX39AO00148 427 aaKnown RBP13.41□□□□□ -0.26
ACTN4-206ENST00000489451 MGEA5O60502 916 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 TBX10O75333 385 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 RB1P06400 928 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 ADD1P35611 737 aaKnown RBP13.41□□□□□ -0.26
ACTN4-206ENST00000489451 STAT5BP51692 787 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 ADCY7P51828 1080 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 PKN1Q16512 942 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 MTHFD1LQ6UB35 978 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 HFE2Q6ZVN8 426 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 PRSS33Q8NF86 280 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 TMEM40Q8WWA1 233 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 KCNB2Q92953 911 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 TRPC6Q9Y210 931 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 SQORQ9Y6N5 450 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 NID2Q14112 1375 aa13.41□□□□□ -0.26
ACTN4-206ENST00000489451 SMIM35A0A1B0GVV1 85 aa13.4□□□□□ -0.26
ACTN4-206ENST00000489451 LINC01565O15544 149 aa13.4□□□□□ -0.26
ACTN4-206ENST00000489451 CSPG5O95196 566 aa13.4□□□□□ -0.26
ACTN4-206ENST00000489451 FOSP01100 380 aaPredicted RBP13.4□□□□□ -0.26
ACTN4-206ENST00000489451 MMP1P03956 469 aa13.4□□□□□ -0.26
ACTN4-206ENST00000489451 ZP2Q05996 745 aa13.4□□□□□ -0.26
ACTN4-206ENST00000489451 AP3B2Q13367 1082 aa13.4□□□□□ -0.26
ACTN4-206ENST00000489451 BTG3Q14201 252 aaPredicted RBP13.4□□□□□ -0.26
ACTN4-206ENST00000489451 PFKFB3Q16875 520 aaPredicted RBP13.4□□□□□ -0.26
ACTN4-206ENST00000489451 TMEM266Q2M3C6 531 aa13.4□□□□□ -0.26
ACTN4-206ENST00000489451 RNF20Q5VTR2 975 aa13.4□□□□□ -0.26
ACTN4-206ENST00000489451 JAKMIP3Q5VZ66 844 aa13.4□□□□□ -0.26
ACTN4-206ENST00000489451 NIPA1Q7RTP0 329 aa13.4□□□□□ -0.26
ACTN4-206ENST00000489451 ADGRD2Q7Z7M1 963 aa13.4□□□□□ -0.26
ACTN4-206ENST00000489451 SDF4Q9BRK5 362 aa13.4□□□□□ -0.26
ACTN4-206ENST00000489451 C11orf84Q9BUA3 381 aaPredicted RBP13.4□□□□□ -0.26
ACTN4-206ENST00000489451 CELF4Q9BZC1 486 aaKnown RBP13.4□□□□□ -0.26
ACTN4-206ENST00000489451 LMAN2LQ9H0V9 348 aa13.4□□□□□ -0.26
ACTN4-206ENST00000489451 AZI2Q9H6S1 392 aa13.4□□□□□ -0.26
ACTN4-206ENST00000489451 ERVK-5Q9HDB9 667 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms