RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 RUFY4Q6ZNE9 571 aa21.49■■□□□ 1.03
MRPL55-230ENST00000489430 USP38Q8NB14 1042 aa21.49■■□□□ 1.03
MRPL55-230ENST00000489430 NSUN7Q8NE18 718 aaKnown RBP21.49■■□□□ 1.03
MRPL55-230ENST00000489430 FAM167AQ96KS9 214 aa21.49■■□□□ 1.03
MRPL55-230ENST00000489430 TEKT3Q9BXF9 490 aa21.49■■□□□ 1.03
MRPL55-230ENST00000489430 BRMS1Q9HCU9 246 aa21.49■■□□□ 1.03
MRPL55-230ENST00000489430 CEP131Q9UPN4 1083 aa21.49■■□□□ 1.03
MRPL55-230ENST00000489430 GJB5O95377 273 aa21.48■■□□□ 1.03
MRPL55-230ENST00000489430 LARGE1O95461 756 aa21.48■■□□□ 1.03
MRPL55-230ENST00000489430 FOSL2P15408 326 aa21.48■■□□□ 1.03
MRPL55-230ENST00000489430 IGBP1P78318 339 aa21.48■■□□□ 1.03
MRPL55-230ENST00000489430 LRCH2Q5VUJ6 765 aa21.48■■□□□ 1.03
MRPL55-230ENST00000489430 NEK8Q86SG6 692 aa21.48■■□□□ 1.03
MRPL55-230ENST00000489430 DNAJB3Q8WWF6 145 aa21.48■■□□□ 1.03
MRPL55-230ENST00000489430 MYLIPQ8WY64 445 aa21.48■■□□□ 1.03
MRPL55-230ENST00000489430 DISC1Q9NRI5 854 aa21.48■■□□□ 1.03
MRPL55-230ENST00000489430 SAMM50Q9Y512 469 aa21.48■■□□□ 1.03
MRPL55-230ENST00000489430 TLL1O43897 1013 aa21.47■■□□□ 1.03
MRPL55-230ENST00000489430 PSMD10O75832 226 aa21.47■■□□□ 1.03
MRPL55-230ENST00000489430 AMHP03971 560 aa21.47■■□□□ 1.03
MRPL55-230ENST00000489430 MRPS6P82932 125 aaKnown RBP21.47■■□□□ 1.03
MRPL55-230ENST00000489430 MTHFD1LQ6UB35 978 aa21.47■■□□□ 1.03
MRPL55-230ENST00000489430 ETNPPLQ8TBG4 499 aa21.47■■□□□ 1.03
MRPL55-230ENST00000489430 ZSCAN31Q96LW9 406 aaPredicted RBP21.47■■□□□ 1.03
MRPL55-230ENST00000489430 FAM20AQ96MK3 541 aa21.47■■□□□ 1.03
MRPL55-230ENST00000489430 GAS2L1Q99501 681 aaPredicted RBP21.47■■□□□ 1.03
MRPL55-230ENST00000489430 RAD9AQ99638 391 aa21.47■■□□□ 1.03
MRPL55-230ENST00000489430 LLPHQ9BRT6 129 aaKnown RBP21.47■■□□□ 1.03
MRPL55-230ENST00000489430 IFIH1Q9BYX4 1025 aaKnown RBP21.47■■□□□ 1.03
MRPL55-230ENST00000489430 DDX25Q9UHL0 483 aaKnown RBP21.47■■□□□ 1.03
MRPL55-230ENST00000489430 CHD9Q3L8U1 2897 aa21.47■■□□□ 1.03
MRPL55-230ENST00000489430 IGSF9BQ9UPX0 1349 aa21.47■■□□□ 1.03
MRPL55-230ENST00000489430 TET1Q8NFU7 2136 aa21.47■■□□□ 1.03
MRPL55-230ENST00000489430 M0QZ92 97 aa21.46■■□□□ 1.03
MRPL55-230ENST00000489430 TBX3O15119 743 aa21.46■■□□□ 1.03
MRPL55-230ENST00000489430 TDP2O95551 362 aa21.46■■□□□ 1.03
MRPL55-230ENST00000489430 CA3P07451 260 aa21.46■■□□□ 1.03
MRPL55-230ENST00000489430 ATP4AP20648 1035 aa21.46■■□□□ 1.03
MRPL55-230ENST00000489430 KRT2P35908 639 aa21.46■■□□□ 1.03
MRPL55-230ENST00000489430 DEFB103AP81534 67 aa21.46■■□□□ 1.03
MRPL55-230ENST00000489430 INF2Q27J81 1249 aa21.46■■□□□ 1.03
MRPL55-230ENST00000489430 TCTN1Q2MV58 587 aa21.46■■□□□ 1.03
MRPL55-230ENST00000489430 B3GNT9Q6UX72 402 aa21.46■■□□□ 1.03
MRPL55-230ENST00000489430 CKAP2LQ8IYA6 745 aa21.46■■□□□ 1.03
MRPL55-230ENST00000489430 ZNF710Q8N1W2 664 aa21.46■■□□□ 1.03
MRPL55-230ENST00000489430 KIF2CQ99661 725 aa21.46■■□□□ 1.03
MRPL55-230ENST00000489430 ZBED2Q9BTP6 218 aa21.46■■□□□ 1.03
MRPL55-230ENST00000489430 SH2B1Q9NRF2 756 aaPredicted RBP21.46■■□□□ 1.03
MRPL55-230ENST00000489430 GABBR1Q9UBS5 961 aa21.46■■□□□ 1.03
MRPL55-230ENST00000489430 KDM3AQ9Y4C1 1321 aa21.46■■□□□ 1.03
MRPL55-230ENST00000489430 MYOGP15173 224 aa21.45■■□□□ 1.02
MRPL55-230ENST00000489430 KLRC1P26715 233 aa21.45■■□□□ 1.02
MRPL55-230ENST00000489430 TRIM29Q14134 588 aa21.45■■□□□ 1.02
MRPL55-230ENST00000489430 LETM2Q2VYF4 491 aa21.45■■□□□ 1.02
MRPL55-230ENST00000489430 TSHZ1Q6ZSZ6 1077 aa21.45■■□□□ 1.02
MRPL55-230ENST00000489430 CDY2AQ9Y6F7 541 aa21.45■■□□□ 1.02
MRPL55-230ENST00000489430 ZBTB42B2RXF5 422 aa21.44■■□□□ 1.02
MRPL55-230ENST00000489430 MAGEB2O15479 319 aa21.44■■□□□ 1.02
MRPL55-230ENST00000489430 LPIN1Q14693 890 aa21.44■■□□□ 1.02
MRPL55-230ENST00000489430 FBXO47Q5MNV8 452 aa21.44■■□□□ 1.02
MRPL55-230ENST00000489430 MAFAQ8NHW3 353 aaPredicted RBP21.44■■□□□ 1.02
MRPL55-230ENST00000489430 TRAPPC12Q8WVT3 735 aa21.44■■□□□ 1.02
MRPL55-230ENST00000489430 TNFRSF25Q93038 417 aa21.44■■□□□ 1.02
MRPL55-230ENST00000489430 UIMC1Q96RL1 719 aa21.44■■□□□ 1.02
MRPL55-230ENST00000489430 FAM49AQ9H0Q0 323 aaPredicted RBP21.44■■□□□ 1.02
MRPL55-230ENST00000489430 UNC45AQ9H3U1 944 aa21.44■■□□□ 1.02
MRPL55-230ENST00000489430 UPF2Q9HAU5 1272 aaKnown RBP21.44■■□□□ 1.02
MRPL55-230ENST00000489430 KCNMB3Q9NPA1 279 aa21.44■■□□□ 1.02
MRPL55-230ENST00000489430 NRBP2Q9NSY0 501 aa21.44■■□□□ 1.02
MRPL55-230ENST00000489430 INSL6Q9Y581 213 aa21.44■■□□□ 1.02
MRPL55-230ENST00000489430 TRPV2Q9Y5S1 764 aa21.44■■□□□ 1.02
MRPL55-230ENST00000489430 MMP1P03956 469 aa21.43■■□□□ 1.02
MRPL55-230ENST00000489430 GHRP10912 638 aa21.43■■□□□ 1.02
MRPL55-230ENST00000489430 TAP1Q03518 808 aa21.43■■□□□ 1.02
MRPL55-230ENST00000489430 PIK3AP1Q6ZUJ8 805 aa21.43■■□□□ 1.02
MRPL55-230ENST00000489430 SLC17A8Q8NDX2 589 aa21.43■■□□□ 1.02
MRPL55-230ENST00000489430 OXER1Q8TDS5 423 aa21.43■■□□□ 1.02
MRPL55-230ENST00000489430 TOP1MTQ969P6 601 aa21.43■■□□□ 1.02
MRPL55-230ENST00000489430 FTHL17Q9BXU8 183 aa21.43■■□□□ 1.02
MRPL55-230ENST00000489430 CELF4Q9BZC1 486 aaKnown RBP21.43■■□□□ 1.02
MRPL55-230ENST00000489430 PRDM12Q9H4Q4 367 aa21.43■■□□□ 1.02
MRPL55-230ENST00000489430 GJB4Q9NTQ9 266 aa21.43■■□□□ 1.02
MRPL55-230ENST00000489430 C22orf31O95567 290 aa21.42■■□□□ 1.02
MRPL55-230ENST00000489430 HMGN5P82970 282 aaKnown RBP21.42■■□□□ 1.02
MRPL55-230ENST00000489430 ST3GAL1Q11201 340 aa21.42■■□□□ 1.02
MRPL55-230ENST00000489430 PPP2R5CQ13362 524 aa21.42■■□□□ 1.02
MRPL55-230ENST00000489430 RABEP1Q15276 862 aa21.42■■□□□ 1.02
MRPL55-230ENST00000489430 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.42■■□□□ 1.02
MRPL55-230ENST00000489430 MIER3Q7Z3K6 550 aa21.42■■□□□ 1.02
MRPL55-230ENST00000489430 KIAA0319LQ8IZA0 1049 aa21.42■■□□□ 1.02
MRPL55-230ENST00000489430 MYOCDQ8IZQ8 938 aa21.42■■□□□ 1.02
MRPL55-230ENST00000489430 KAT6AQ92794 2004 aa21.41■■□□□ 1.02
MRPL55-230ENST00000489430 SLC37A4O43826 429 aa21.41■■□□□ 1.02
MRPL55-230ENST00000489430 ZNF862O60290 1169 aa21.41■■□□□ 1.02
MRPL55-230ENST00000489430 CCNT1O60563 726 aaKnown RBP21.41■■□□□ 1.02
MRPL55-230ENST00000489430 JAK2O60674 1132 aa21.41■■□□□ 1.02
MRPL55-230ENST00000489430 OATP04181 439 aa21.41■■□□□ 1.02
MRPL55-230ENST00000489430 POU3F3P20264 500 aaPredicted RBP21.41■■□□□ 1.02
MRPL55-230ENST00000489430 HTRA4P83105 476 aaPredicted RBP21.41■■□□□ 1.02
MRPL55-230ENST00000489430 SLFN12Q8IYM2 578 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms