RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 PBRM1Q86U86 1689 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 LGALS16A8MUM7 142 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 HSP90AA5PQ58FG0 334 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 HEXIM2Q96MH2 286 aaKnown RBP18.96■□□□□ 0.63
NPHP4-209ENST00000489180 A0A0G2JND7 137 aa18.95■□□□□ 0.62
NPHP4-209ENST00000489180 STMN1P16949 149 aa18.95■□□□□ 0.62
NPHP4-209ENST00000489180 SUSD4Q5VX71 490 aa18.95■□□□□ 0.62
NPHP4-209ENST00000489180 MLXIPLQ9NP71 852 aa18.95■□□□□ 0.62
NPHP4-209ENST00000489180 KCTD2Q14681 263 aa18.95■□□□□ 0.62
NPHP4-209ENST00000489180 FAM47EQ6ZV65 393 aa18.95■□□□□ 0.62
NPHP4-209ENST00000489180 TTLL11Q8NHH1 800 aa18.95■□□□□ 0.62
NPHP4-209ENST00000489180 HEG1Q9ULI3 1381 aa18.95■□□□□ 0.62
NPHP4-209ENST00000489180 TEX33O43247 280 aa18.95■□□□□ 0.62
NPHP4-209ENST00000489180 MED7O43513 233 aa18.95■□□□□ 0.62
NPHP4-209ENST00000489180 SERPINB2P05120 415 aa18.95■□□□□ 0.62
NPHP4-209ENST00000489180 CCHCR1Q8TD31 782 aa18.95■□□□□ 0.62
NPHP4-209ENST00000489180 SH3RF3Q8TEJ3 882 aaPredicted RBP18.95■□□□□ 0.62
NPHP4-209ENST00000489180 INPP5FQ9Y2H2 1132 aa18.95■□□□□ 0.62
NPHP4-209ENST00000489180 SNAP23O00161 211 aa18.95■□□□□ 0.62
NPHP4-209ENST00000489180 THOC5Q13769 683 aaKnown RBP18.95■□□□□ 0.62
NPHP4-209ENST00000489180 H0Y3Z8 333 aa18.94■□□□□ 0.62
NPHP4-209ENST00000489180 BEND6Q5SZJ8 279 aaPredicted RBP18.94■□□□□ 0.62
NPHP4-209ENST00000489180 PITPNM3Q9BZ71 974 aa18.94■□□□□ 0.62
NPHP4-209ENST00000489180 USP17L5A8MUK1 530 aa18.94■□□□□ 0.62
NPHP4-209ENST00000489180 APOEP02649 317 aa18.94■□□□□ 0.62
NPHP4-209ENST00000489180 EIF2AK2P19525 551 aaKnown RBP18.94■□□□□ 0.62
NPHP4-209ENST00000489180 PEX3P56589 373 aa18.94■□□□□ 0.62
NPHP4-209ENST00000489180 UNC13DQ70J99 1090 aa18.94■□□□□ 0.62
NPHP4-209ENST00000489180 CENPUQ71F23 418 aa18.94■□□□□ 0.62
NPHP4-209ENST00000489180 ABTB1Q969K4 478 aaPredicted RBP18.94■□□□□ 0.62
NPHP4-209ENST00000489180 TTC17Q96AE7 1141 aa18.94■□□□□ 0.62
NPHP4-209ENST00000489180 HP1BP3Q5SSJ5 553 aaPredicted RBP18.94■□□□□ 0.62
NPHP4-209ENST00000489180 CEP72Q9P209 647 aa18.94■□□□□ 0.62
NPHP4-209ENST00000489180 ZDHHC9Q9Y397 364 aa18.94■□□□□ 0.62
NPHP4-209ENST00000489180 SULF1Q8IWU6 871 aa18.94■□□□□ 0.62
NPHP4-209ENST00000489180 MAPK13O15264 365 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 FOXN1O15353 648 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 SETSIPP0DME0 302 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 CDC27P30260 824 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 ART3Q13508 389 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 FAM196AQ6ZSG2 479 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 SRGAP2CP0DJJ0 459 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 ZNF18P17022 549 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 ZNF394Q53GI3 561 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 RSBN1LQ6PCB5 846 aaPredicted RBP18.93■□□□□ 0.62
NPHP4-209ENST00000489180 RYBPQ8N488 228 aaPredicted RBP18.93■□□□□ 0.62
NPHP4-209ENST00000489180 PACSIN2Q9UNF0 486 aaPredicted RBP18.93■□□□□ 0.62
NPHP4-209ENST00000489180 GOLGA8MH3BSY2 632 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 CYP2E1P05181 493 aaPredicted RBP18.93■□□□□ 0.62
NPHP4-209ENST00000489180 ZNF211Q13398 564 aaPredicted RBP18.93■□□□□ 0.62
NPHP4-209ENST00000489180 SFR1Q86XK3 245 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 PASD1Q8IV76 773 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 SAMD9Q5K651 1589 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 PRR36Q9H6K5 1346 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 GOLGA8QA0A0J9YX86 632 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 GOLGA8OA6NCC3 632 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 E9PMD0 336 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 GOLGA8NF8WBI6 632 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 TADA3O75528 432 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 CHMP6Q96FZ7 201 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 SRP68Q9UHB9 627 aaKnown RBP18.93■□□□□ 0.62
NPHP4-209ENST00000489180 PNMA2Q9UL42 364 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 H7C1W4 665 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 MAGOHP61326 146 aaKnown RBP18.93■□□□□ 0.62
NPHP4-209ENST00000489180 PPP4R3CPQ6ZMV5 832 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 MORC4Q8TE76 937 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 MSTO1Q9BUK6 570 aa18.93■□□□□ 0.62
NPHP4-209ENST00000489180 ROBO2Q9HCK4 1378 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 ZBED1O96006 694 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 IQCB1Q15051 598 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 HLFQ16534 295 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 CNKSR1Q969H4 720 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 FAM81BQ96LP2 452 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 THEGQ9P2T0 379 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 ANAPC7Q9UJX3 599 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 IQANK1A0A1B0GTG1 560 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 LPXNO60711 386 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 SKIP12755 728 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 PSMA2P25787 234 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 MARK3P27448 753 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 RHOT2Q8IXI1 618 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 SH3GLB2Q9NR46 395 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 ANGPTL2Q9UKU9 493 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 GSTA4O15217 222 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.92■□□□□ 0.62
NPHP4-209ENST00000489180 TADA2BQ86TJ2 420 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 DCPSQ96C86 337 aaKnown RBP18.92■□□□□ 0.62
NPHP4-209ENST00000489180 BPIFA3Q9BQP9 254 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 TMEM260Q9NX78 707 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 ARHGEF5Q12774 1597 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 IGKV5-2P06315 115 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 DPP9Q86TI2 863 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 PDIK1LQ8N165 341 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 FAF2Q96CS3 445 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 TUBB6Q9BUF5 446 aa18.92■□□□□ 0.62
NPHP4-209ENST00000489180 MAGEA9P43362 315 aa18.91■□□□□ 0.62
NPHP4-209ENST00000489180 PP2D1A8MPX8 630 aa18.91■□□□□ 0.62
NPHP4-209ENST00000489180 CCDC188H7C350 402 aa18.91■□□□□ 0.62
NPHP4-209ENST00000489180 NKX1-1Q15270 411 aaPredicted RBP18.91■□□□□ 0.62
NPHP4-209ENST00000489180 GLE1Q53GS7 698 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms