RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 NPEPPSL1A6NEC2 478 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 HIP1RO75146 1068 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 HERVK_113P62684 666 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 PPP2CBP62714 309 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 PPP2CAP67775 309 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 IL13RA1P78552 427 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 IRF9Q00978 393 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 ZNF460Q14592 562 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 SURF1Q15526 300 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 ZNF827Q17R98 1081 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 SPATS1Q496A3 300 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 LRSAM1Q6UWE0 723 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 WDR48Q8TAF3 677 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 GBP4Q96PP9 640 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 KCNH7Q9NS40 1196 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 GALNT8Q9NY28 637 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 PPP4R1LQ9P1A2 415 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 BTBD7Q9P203 1132 aa7.12□□□□□ -1.27
PTPN4-212ENST00000488896 PRAMEF22A3QJZ6 481 aa7.11□□□□□ -1.27
PTPN4-212ENST00000488896 FOXP2O15409 715 aa7.11□□□□□ -1.27
PTPN4-212ENST00000488896 DNAJC8O75937 253 aaPredicted RBP7.11□□□□□ -1.27
PTPN4-212ENST00000488896 GLRX3O76003 335 aaKnown RBP7.11□□□□□ -1.27
PTPN4-212ENST00000488896 ZNF888P0CJ79 500 aaPredicted RBP7.11□□□□□ -1.27
PTPN4-212ENST00000488896 CSF2RBP32927 897 aa7.11□□□□□ -1.27
PTPN4-212ENST00000488896 IGFALSP35858 605 aa7.11□□□□□ -1.27
PTPN4-212ENST00000488896 RRADP55042 308 aa7.11□□□□□ -1.27
PTPN4-212ENST00000488896 EFEMP1Q12805 493 aa7.11□□□□□ -1.27
PTPN4-212ENST00000488896 FNDC3BQ53EP0 1204 aaKnown RBP7.11□□□□□ -1.27
PTPN4-212ENST00000488896 ZCCHC8Q6NZY4 707 aaKnown RBP7.11□□□□□ -1.27
PTPN4-212ENST00000488896 ASB15Q8WXK1 588 aa7.11□□□□□ -1.27
PTPN4-212ENST00000488896 SMPD4Q9NXE4 827 aa7.11□□□□□ -1.27
PTPN4-212ENST00000488896 NPTXRO95502 500 aa7.1□□□□□ -1.27
PTPN4-212ENST00000488896 SDSP20132 328 aa7.1□□□□□ -1.27
PTPN4-212ENST00000488896 PIK3R6Q5UE93 754 aa7.1□□□□□ -1.27
PTPN4-212ENST00000488896 CHST13Q8NET6 341 aa7.1□□□□□ -1.27
PTPN4-212ENST00000488896 AJUBAQ96IF1 538 aa7.1□□□□□ -1.27
PTPN4-212ENST00000488896 RNPC3Q96LT9 517 aaKnown RBP7.1□□□□□ -1.27
PTPN4-212ENST00000488896 AMNQ9BXJ7 453 aa7.1□□□□□ -1.27
PTPN4-212ENST00000488896 ST6GALNAC2Q9UJ37 374 aa7.1□□□□□ -1.27
PTPN4-212ENST00000488896 CDC42EP3Q9UKI2 254 aa7.1□□□□□ -1.27
PTPN4-212ENST00000488896 B3GALT1Q9Y5Z6 326 aa7.1□□□□□ -1.27
PTPN4-212ENST00000488896 RASSF10A6NK89 507 aa7.09□□□□□ -1.27
PTPN4-212ENST00000488896 B4E1Z4 1266 aa7.09□□□□□ -1.27
PTPN4-212ENST00000488896 MPIG6BO95866 241 aa7.09□□□□□ -1.27
PTPN4-212ENST00000488896 ASLP04424 464 aa7.09□□□□□ -1.27
PTPN4-212ENST00000488896 POLD1P28340 1107 aa7.09□□□□□ -1.27
PTPN4-212ENST00000488896 ECE1P42892 770 aa7.09□□□□□ -1.27
PTPN4-212ENST00000488896 KCNQ1P51787 676 aa7.09□□□□□ -1.27
PTPN4-212ENST00000488896 PABPC4Q13310 644 aaKnown RBP eCLIP7.09□□□□□ -1.27
PTPN4-212ENST00000488896 USP10Q14694 798 aaKnown RBP7.09□□□□□ -1.27
PTPN4-212ENST00000488896 OTOP2Q7RTS6 562 aa7.09□□□□□ -1.27
PTPN4-212ENST00000488896 IFNL2Q8IZJ0 200 aa7.09□□□□□ -1.27
PTPN4-212ENST00000488896 C8orf49Q96NF6 230 aa7.09□□□□□ -1.27
PTPN4-212ENST00000488896 TMEM260Q9NX78 707 aa7.09□□□□□ -1.27
PTPN4-212ENST00000488896 ADRB1P08588 477 aa7.08□□□□□ -1.28
PTPN4-212ENST00000488896 JMJD7P0C870 316 aa7.08□□□□□ -1.28
PTPN4-212ENST00000488896 MAGEA10P43363 369 aaPredicted RBP7.08□□□□□ -1.28
PTPN4-212ENST00000488896 EPHB4P54760 987 aa7.08□□□□□ -1.28
PTPN4-212ENST00000488896 KRTAP10-2P60368 255 aa7.08□□□□□ -1.28
PTPN4-212ENST00000488896 NFKB2Q00653 900 aa7.08□□□□□ -1.28
PTPN4-212ENST00000488896 CD83Q01151 205 aa7.08□□□□□ -1.28
PTPN4-212ENST00000488896 TOP3AQ13472 1001 aaPredicted RBP7.08□□□□□ -1.28
PTPN4-212ENST00000488896 NOLC1Q14978 699 aaKnown RBP eCLIP7.08□□□□□ -1.28
PTPN4-212ENST00000488896 CATSPEREQ5SY80 951 aa7.08□□□□□ -1.28
PTPN4-212ENST00000488896 DLG3Q92796 817 aa7.08□□□□□ -1.28
PTPN4-212ENST00000488896 LRRC37BQ96QE4 947 aa7.08□□□□□ -1.28
PTPN4-212ENST00000488896 BOCQ9BWV1 1114 aa7.08□□□□□ -1.28
PTPN4-212ENST00000488896 CARD11Q9BXL7 1154 aa7.08□□□□□ -1.28
PTPN4-212ENST00000488896 KATNBL1Q9H079 304 aa7.08□□□□□ -1.28
PTPN4-212ENST00000488896 CNOT11Q9UKZ1 510 aaKnown RBP7.08□□□□□ -1.28
PTPN4-212ENST00000488896 CD2APQ9Y5K6 639 aa7.08□□□□□ -1.28
PTPN4-212ENST00000488896 PTPDC1A2A3K4 754 aa7.07□□□□□ -1.28
PTPN4-212ENST00000488896 CNOT4O95628 575 aaKnown RBP7.07□□□□□ -1.28
PTPN4-212ENST00000488896 HMGCRP04035 888 aa7.07□□□□□ -1.28
PTPN4-212ENST00000488896 ZBTB48P10074 688 aaPredicted RBP7.07□□□□□ -1.28
PTPN4-212ENST00000488896 KIF11P52732 1056 aa7.07□□□□□ -1.28
PTPN4-212ENST00000488896 ZNF568Q3ZCX4 644 aa7.07□□□□□ -1.28
PTPN4-212ENST00000488896 CIR1Q86X95 450 aaPredicted RBP7.07□□□□□ -1.28
PTPN4-212ENST00000488896 REXO1L1PQ8IX06 675 aa7.07□□□□□ -1.28
PTPN4-212ENST00000488896 CHST14Q8NCH0 376 aa7.07□□□□□ -1.28
PTPN4-212ENST00000488896 GNRHR2Q96P88 292 aa7.07□□□□□ -1.28
PTPN4-212ENST00000488896 GPR20Q99678 358 aa7.07□□□□□ -1.28
PTPN4-212ENST00000488896 SSBP3Q9BWW4 388 aaPredicted RBP7.07□□□□□ -1.28
PTPN4-212ENST00000488896 BTBD2Q9BX70 525 aa7.07□□□□□ -1.28
PTPN4-212ENST00000488896 CABP5Q9NP86 173 aa7.07□□□□□ -1.28
PTPN4-212ENST00000488896 GPR42O15529 346 aa7.06□□□□□ -1.28
PTPN4-212ENST00000488896 FLT3P36888 993 aa7.06□□□□□ -1.28
PTPN4-212ENST00000488896 RANGAP1P46060 587 aaPredicted RBP7.06□□□□□ -1.28
PTPN4-212ENST00000488896 MECP2P51608 486 aaKnown RBP7.06□□□□□ -1.28
PTPN4-212ENST00000488896 ARHGAP44Q17R89 818 aa7.06□□□□□ -1.28
PTPN4-212ENST00000488896 CFAP100Q494V2 611 aa7.06□□□□□ -1.28
PTPN4-212ENST00000488896 SLFN13Q68D06 897 aa7.06□□□□□ -1.28
PTPN4-212ENST00000488896 UBE2R2Q712K3 238 aaPredicted RBP7.06□□□□□ -1.28
PTPN4-212ENST00000488896 HOMER1Q86YM7 354 aa7.06□□□□□ -1.28
PTPN4-212ENST00000488896 WNK4Q96J92 1243 aa7.06□□□□□ -1.28
PTPN4-212ENST00000488896 SAMD11Q96NU1 681 aa7.06□□□□□ -1.28
PTPN4-212ENST00000488896 LMF1Q96S06 567 aa7.06□□□□□ -1.28
PTPN4-212ENST00000488896 KIAA1683Q9H0B3 1180 aa7.06□□□□□ -1.28
PTPN4-212ENST00000488896 OR10A5Q9H207 317 aa7.06□□□□□ -1.28
PTPN4-212ENST00000488896 FANCLQ9NW38 375 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms