RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 SCLYQ96I15 445 aa19.29■□□□□ 0.68
SHROOM1-205ENST00000488072 EIF2AK1Q9BQI3 630 aaKnown RBP19.29■□□□□ 0.68
SHROOM1-205ENST00000488072 NOC4LQ9BVI4 516 aaKnown RBP19.29■□□□□ 0.68
SHROOM1-205ENST00000488072 TSHZ2Q9NRE2 1034 aa19.29■□□□□ 0.68
SHROOM1-205ENST00000488072 KIAA0355O15063 1070 aa19.28■□□□□ 0.68
SHROOM1-205ENST00000488072 MED24O75448 989 aa19.28■□□□□ 0.68
SHROOM1-205ENST00000488072 F13A1P00488 732 aa19.28■□□□□ 0.68
SHROOM1-205ENST00000488072 SFNP31947 248 aa19.28■□□□□ 0.68
SHROOM1-205ENST00000488072 EPHB4P54760 987 aa19.28■□□□□ 0.68
SHROOM1-205ENST00000488072 PTPN11Q06124 597 aaPredicted RBP19.28■□□□□ 0.68
SHROOM1-205ENST00000488072 TRIM71Q2Q1W2 868 aaKnown RBP19.28■□□□□ 0.68
SHROOM1-205ENST00000488072 PLA2G4FQ68DD2 849 aa19.28■□□□□ 0.68
SHROOM1-205ENST00000488072 WNT8AQ9H1J5 351 aa19.28■□□□□ 0.68
SHROOM1-205ENST00000488072 NR2E3Q9Y5X4 410 aa19.28■□□□□ 0.68
SHROOM1-205ENST00000488072 PDE4DIPQ5VU43 2346 aa19.27■□□□□ 0.68
SHROOM1-205ENST00000488072 TLR3O15455 904 aaKnown RBP19.27■□□□□ 0.68
SHROOM1-205ENST00000488072 SLITRK3O94933 977 aa19.27■□□□□ 0.68
SHROOM1-205ENST00000488072 MAGEA10P43363 369 aaPredicted RBP19.27■□□□□ 0.68
SHROOM1-205ENST00000488072 ATP2C1P98194 919 aaPredicted RBP19.27■□□□□ 0.68
SHROOM1-205ENST00000488072 PTPAQ15257 358 aa19.27■□□□□ 0.68
SHROOM1-205ENST00000488072 TPH2Q8IWU9 490 aa19.27■□□□□ 0.68
SHROOM1-205ENST00000488072 VWCEQ96DN2 955 aa19.27■□□□□ 0.68
SHROOM1-205ENST00000488072 LXNQ9BS40 222 aa19.27■□□□□ 0.68
SHROOM1-205ENST00000488072 NOD1Q9Y239 953 aa19.27■□□□□ 0.68
SHROOM1-205ENST00000488072 MROH7Q68CQ1 1323 aa19.26■□□□□ 0.67
SHROOM1-205ENST00000488072 DDX11L8A8MPP1 907 aa19.26■□□□□ 0.67
SHROOM1-205ENST00000488072 OATP04181 439 aa19.26■□□□□ 0.67
SHROOM1-205ENST00000488072 SPATA31C1P0DKV0 1188 aa19.26■□□□□ 0.67
SHROOM1-205ENST00000488072 RAG1P15918 1043 aa19.26■□□□□ 0.67
SHROOM1-205ENST00000488072 MARCKSP29966 332 aaPredicted RBP19.26■□□□□ 0.67
SHROOM1-205ENST00000488072 NPEPPSP55786 919 aa19.26■□□□□ 0.67
SHROOM1-205ENST00000488072 ANO5Q75V66 913 aa19.26■□□□□ 0.67
SHROOM1-205ENST00000488072 HSD17B14Q9BPX1 270 aa19.26■□□□□ 0.67
SHROOM1-205ENST00000488072 HIPK3Q9H422 1215 aa19.26■□□□□ 0.67
SHROOM1-205ENST00000488072 BMP2KQ9NSY1 1161 aaPredicted RBP19.26■□□□□ 0.67
SHROOM1-205ENST00000488072 TRIP12Q14669 1992 aaPredicted RBP19.25■□□□□ 0.67
SHROOM1-205ENST00000488072 VWA3AA6NCI4 1184 aa19.25■□□□□ 0.67
SHROOM1-205ENST00000488072 BRD1O95696 1058 aa19.25■□□□□ 0.67
SHROOM1-205ENST00000488072 TIMP1P01033 207 aa19.25■□□□□ 0.67
SHROOM1-205ENST00000488072 CTSHP09668 335 aa19.25■□□□□ 0.67
SHROOM1-205ENST00000488072 ACRP10323 421 aa19.25■□□□□ 0.67
SHROOM1-205ENST00000488072 TMEM62Q0P6H9 643 aa19.25■□□□□ 0.67
SHROOM1-205ENST00000488072 ORC2Q13416 577 aaPredicted RBP19.25■□□□□ 0.67
SHROOM1-205ENST00000488072 GPNMBQ14956 572 aa19.25■□□□□ 0.67
SHROOM1-205ENST00000488072 MTERF2Q49AM1 385 aa19.25■□□□□ 0.67
SHROOM1-205ENST00000488072 TRAF7Q6Q0C0 670 aa19.25■□□□□ 0.67
SHROOM1-205ENST00000488072 SERINC5Q86VE9 423 aa19.25■□□□□ 0.67
SHROOM1-205ENST00000488072 RDM1Q8NG50 284 aa19.25■□□□□ 0.67
SHROOM1-205ENST00000488072 CEP89Q96ST8 783 aa19.25■□□□□ 0.67
SHROOM1-205ENST00000488072 FAM49AQ9H0Q0 323 aaPredicted RBP19.25■□□□□ 0.67
SHROOM1-205ENST00000488072 SEPT9Q9UHD8 586 aaPredicted RBP19.25■□□□□ 0.67
SHROOM1-205ENST00000488072 HBP1O60381 514 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 P4HBP07237 508 aaKnown RBP19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 CSF2RAP15509 400 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 KLRC1P26715 233 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 DDIT3P35638 169 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 QARSP47897 775 aaKnown RBP19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 FXR2P51116 673 aaKnown RBP eCLIP19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 PSMC5P62195 406 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 TCTN1Q2MV58 587 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 SPECC1Q5M775 1068 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 ZNF618Q5T7W0 954 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 POTEGQ6S5H5 508 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 MTHFD1LQ6UB35 978 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 CATSPER3Q86XQ3 398 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 PIGOQ8TEQ8 1089 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 DNAJB3Q8WWF6 145 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 ZNF668Q96K58 619 aaPredicted RBP19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 CLIC6Q96NY7 704 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 PPP1R16BQ96T49 567 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 PLIN2Q99541 437 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 MMTAG2Q9BU76 263 aaKnown RBP19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 TUBE1Q9UJT0 475 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 CEP290O15078 2479 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 NRCAMQ92823 1304 aa19.24■□□□□ 0.67
SHROOM1-205ENST00000488072 MBLAC1A4D2B0 266 aaPredicted RBP19.23■□□□□ 0.67
SHROOM1-205ENST00000488072 THPOP40225 353 aa19.23■□□□□ 0.67
SHROOM1-205ENST00000488072 PTK7Q13308 1070 aa19.23■□□□□ 0.67
SHROOM1-205ENST00000488072 DRP2Q13474 957 aa19.23■□□□□ 0.67
SHROOM1-205ENST00000488072 MBTPS1Q14703 1052 aa19.23■□□□□ 0.67
SHROOM1-205ENST00000488072 CHRDL2Q6WN34 429 aa19.23■□□□□ 0.67
SHROOM1-205ENST00000488072 DTHD1Q6ZMT9 781 aa19.23■□□□□ 0.67
SHROOM1-205ENST00000488072 USP49Q70CQ1 688 aa19.23■□□□□ 0.67
SHROOM1-205ENST00000488072 C16orf59Q7L2K0 433 aa19.23■□□□□ 0.67
SHROOM1-205ENST00000488072 LRRC71Q8N4P6 559 aa19.23■□□□□ 0.67
SHROOM1-205ENST00000488072 IGSF22Q8N9C0 903 aa19.23■□□□□ 0.67
SHROOM1-205ENST00000488072 LRRC15Q8TF66 581 aa19.23■□□□□ 0.67
SHROOM1-205ENST00000488072 BBXQ8WY36 941 aaPredicted RBP19.23■□□□□ 0.67
SHROOM1-205ENST00000488072 ZSCAN16Q9H4T2 348 aaPredicted RBP19.23■□□□□ 0.67
SHROOM1-205ENST00000488072 LRWD1Q9UFC0 647 aa19.23■□□□□ 0.67
SHROOM1-205ENST00000488072 PRKAG2Q9UGJ0 569 aa19.23■□□□□ 0.67
SHROOM1-205ENST00000488072 C22orf31O95567 290 aa19.22■□□□□ 0.67
SHROOM1-205ENST00000488072 CKBP12277 381 aa19.22■□□□□ 0.67
SHROOM1-205ENST00000488072 SLC26A2P50443 739 aa19.22■□□□□ 0.67
SHROOM1-205ENST00000488072 DNM1Q05193 864 aaKnown RBP19.22■□□□□ 0.67
SHROOM1-205ENST00000488072 MKRN4PQ13434 485 aaPredicted RBP19.22■□□□□ 0.67
SHROOM1-205ENST00000488072 TARBP2Q15633 366 aaKnown RBP19.22■□□□□ 0.67
SHROOM1-205ENST00000488072 SEZ6LQ9BYH1 1024 aa19.22■□□□□ 0.67
SHROOM1-205ENST00000488072 RBM19Q9Y4C8 960 aaKnown RBP19.22■□□□□ 0.67
SHROOM1-205ENST00000488072 RRN3P2A6NIE6 340 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms