RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 TCRBV5S4A2TA0A5A2 114 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 ASB14A6NK59 587 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 M0R2N6 131 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 EML1O00423 815 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 PRKAB2O43741 272 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 MBD4O95243 580 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 RABGGTBP53611 331 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 OAZ1P54368 228 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 BEX3Q00994 111 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 TNP2Q05952 138 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 ICE2Q659A1 982 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 CXCL17Q6UXB2 119 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 CCDC144CPQ8IYA2 1237 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 CLASRPQ8N2M8 674 aaKnown RBP7.94□□□□□ -1.14
HDAC3-209ENST00000486618 GALNT6Q8NCL4 622 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 NAP1L4Q99733 375 aaKnown RBP7.94□□□□□ -1.14
HDAC3-209ENST00000486618 NOC4LQ9BVI4 516 aaKnown RBP7.94□□□□□ -1.14
HDAC3-209ENST00000486618 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.94□□□□□ -1.142e-6■■□□□ 12.7
HDAC3-209ENST00000486618 TSPAN10Q9H1Z9 355 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-209ENST00000486618 EPHX3Q9H6B9 360 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 NYAP2Q9P242 653 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 ZNF232Q9UNY5 417 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 RIPK3Q9Y572 518 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 MTCH2Q9Y6C9 303 aa7.94□□□□□ -1.14
HDAC3-209ENST00000486618 CYP2D7A0A087X1C5 515 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 CCDC189A1A4V9 331 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 SERTM1A2A2V5 107 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 CFAP69A5D8W1 941 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 SFI1A8K8P3 1242 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 KIF28PB7ZC32 967 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 F5H6K3 240 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 KHNYNO15037 678 aaKnown RBP7.93□□□□□ -1.14
HDAC3-209ENST00000486618 CTAGE5O15320 804 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 ADCY6O43306 1168 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 SUPT20HL2P0C7V6 817 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 FAM157BP0CG42 384 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 ACTN1P12814 892 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 CD33P20138 364 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 ADD2P35612 726 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 KLRC3Q07444 240 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 HSP90AA2PQ14568 343 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-209ENST00000486618 FSCN1Q16658 493 aaKnown RBP7.93□□□□□ -1.14
HDAC3-209ENST00000486618 RNF187Q5TA31 235 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-209ENST00000486618 SLCO4C1Q6ZQN7 724 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 PCGF5Q86SE9 256 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 NPAS4Q8IUM7 802 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 TSEN2Q8NCE0 465 aaKnown RBP7.93□□□□□ -1.14
HDAC3-209ENST00000486618 MKNK2Q9HBH9 465 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 RAVER2Q9HCJ3 691 aaKnown RBP7.93□□□□□ -1.14
HDAC3-209ENST00000486618 IL1RAPL2Q9NP60 686 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 FEM1BQ9UK73 627 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 EXOC6BQ9Y2D4 811 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 Q9Y3F1 56 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 UMODL1Q5DID0 1318 aa7.93□□□□□ -1.14
HDAC3-209ENST00000486618 CHD9Q3L8U1 2897 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 DYNC1LI2O43237 492 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-209ENST00000486618 B4GALT4O60513 344 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 NDUFB10O96000 172 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 CA3P07451 260 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 IFIT2P09913 472 aaKnown RBP7.92□□□□□ -1.14
HDAC3-209ENST00000486618 MYOGP15173 224 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 PSMA6P60900 246 aaKnown RBP7.92□□□□□ -1.14
HDAC3-209ENST00000486618 SAMD5Q5TGI4 173 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 IQSEC1Q6DN90 963 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 ZSCAN25Q6NSZ9 544 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 CTR9Q6PD62 1173 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 TLK2Q86UE8 772 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 ITPRIPQ8IWB1 547 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 BEND7Q8N7W2 519 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-209ENST00000486618 PDILTQ8N807 584 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 PHOSPHO2Q8TCD6 241 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 RHPN1Q8TCX5 695 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 EDARADDQ8WWZ3 215 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 KIF1BPQ96EK5 621 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 SLC9A7Q96T83 725 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 NUP88Q99567 741 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-209ENST00000486618 KATNBL1Q9H079 304 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 TRPV6Q9H1D0 765 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 WNT8AQ9H1J5 351 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 ACAD9Q9H845 621 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 SLC38A10Q9HBR0 1119 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 ZNF287Q9HBT7 754 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 PAG1Q9NWQ8 432 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 ARPP21Q9UBL0 812 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-209ENST00000486618 DNMT3AQ9Y6K1 912 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-209ENST00000486618 SLC4A4Q9Y6R1 1079 aa7.92□□□□□ -1.14
HDAC3-209ENST00000486618 MYH4Q9Y623 1939 aa7.91□□□□□ -1.14
HDAC3-209ENST00000486618 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-209ENST00000486618 RFXAPO00287 272 aa7.91□□□□□ -1.14
HDAC3-209ENST00000486618 EFSO43281 561 aa7.91□□□□□ -1.14
HDAC3-209ENST00000486618 RRP9O43818 475 aaKnown RBP7.91□□□□□ -1.14
HDAC3-209ENST00000486618 ARAFP10398 606 aa7.91□□□□□ -1.14
HDAC3-209ENST00000486618 RASA1P20936 1047 aa7.91□□□□□ -1.14
HDAC3-209ENST00000486618 SCP2P22307 547 aa7.91□□□□□ -1.14
HDAC3-209ENST00000486618 MAN1A1P33908 653 aa7.91□□□□□ -1.14
HDAC3-209ENST00000486618 RFC2P35250 354 aa7.91□□□□□ -1.14
HDAC3-209ENST00000486618 SNRPNP63162 240 aaKnown RBP7.91□□□□□ -1.14
HDAC3-209ENST00000486618 CNTN2Q02246 1040 aa7.91□□□□□ -1.14
HDAC3-209ENST00000486618 TTLL4Q14679 1199 aa7.91□□□□□ -1.14
HDAC3-209ENST00000486618 UBE3CQ15386 1083 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms