RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 SPECC1Q5M775 1068 aa11.28□□□□□ -0.6
PTPN7-213ENST00000486116 TAF2Q6P1X5 1199 aa11.28□□□□□ -0.6
PTPN7-213ENST00000486116 POTEGQ6S5H5 508 aa11.28□□□□□ -0.6
PTPN7-213ENST00000486116 MCF2L2Q86YR7 1114 aa11.28□□□□□ -0.6
PTPN7-213ENST00000486116 MAML2Q8IZL2 1156 aaPredicted RBP11.28□□□□□ -0.6
PTPN7-213ENST00000486116 DNAJB3Q8WWF6 145 aa11.28□□□□□ -0.6
PTPN7-213ENST00000486116 MRPS27Q92552 414 aaKnown RBP11.28□□□□□ -0.6
PTPN7-213ENST00000486116 ZFP91Q96JP5 570 aaPredicted RBP11.28□□□□□ -0.6
PTPN7-213ENST00000486116 SEC62Q99442 399 aaKnown RBP11.28□□□□□ -0.6
PTPN7-213ENST00000486116 USP26Q9BXU7 913 aa11.28□□□□□ -0.6
PTPN7-213ENST00000486116 FTHL17Q9BXU8 183 aa11.28□□□□□ -0.6
PTPN7-213ENST00000486116 CWH43Q9H720 699 aa11.28□□□□□ -0.6
PTPN7-213ENST00000486116 DBR1Q9UK59 544 aaKnown RBP11.28□□□□□ -0.6
PTPN7-213ENST00000486116 GCN1Q92616 2671 aaKnown RBP11.28□□□□□ -0.6
PTPN7-213ENST00000486116 COL4A3Q01955 1670 aa11.27□□□□□ -0.6
PTPN7-213ENST00000486116 TBKBP1A7MCY6 615 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 STK25O00506 426 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 OPLAHO14841 1288 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 KINO60870 393 aaKnown RBP11.27□□□□□ -0.61
PTPN7-213ENST00000486116 DCNP07585 359 aaKnown RBP11.27□□□□□ -0.61
PTPN7-213ENST00000486116 CFHP08603 1231 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 GOLGA8HP0CJ92 632 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 TGFB3P10600 412 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 IBSPP21815 317 aaPredicted RBP11.27□□□□□ -0.61
PTPN7-213ENST00000486116 TGM1P22735 817 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 MRPS6P82932 125 aaKnown RBP11.27□□□□□ -0.61
PTPN7-213ENST00000486116 PLCB3Q01970 1234 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 LMNB2Q03252 620 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 PPM1JQ5JR12 505 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 C1orf210Q8IVY1 113 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 GPR161Q8N6U8 529 aaKnown RBP11.27□□□□□ -0.61
PTPN7-213ENST00000486116 GPR20Q99678 358 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 UBA5Q9GZZ9 404 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 TMX1Q9H3N1 280 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 TBC1D17Q9HA65 648 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 KCNK12Q9HB15 430 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 NGRNQ9NPE2 291 aaKnown RBP11.27□□□□□ -0.61
PTPN7-213ENST00000486116 TYW1Q9NV66 732 aaKnown RBP11.27□□□□□ -0.61
PTPN7-213ENST00000486116 LRFN2Q9ULH4 789 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 PADI3Q9ULW8 664 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 NRCAMQ92823 1304 aa11.27□□□□□ -0.61
PTPN7-213ENST00000486116 NOP56O00567 594 aaKnown RBP11.26□□□□□ -0.61
PTPN7-213ENST00000486116 ORC4O43929 436 aa11.26□□□□□ -0.61
PTPN7-213ENST00000486116 CLASP2O75122 1294 aaKnown RBP11.26□□□□□ -0.61
PTPN7-213ENST00000486116 CFBP00751 764 aa11.26□□□□□ -0.61
PTPN7-213ENST00000486116 SARSP49591 514 aaKnown RBP11.26□□□□□ -0.61
PTPN7-213ENST00000486116 HSD17B4P51659 736 aa11.26□□□□□ -0.61
PTPN7-213ENST00000486116 PGM5Q15124 567 aa11.26□□□□□ -0.61
PTPN7-213ENST00000486116 MARCH8Q5T0T0 291 aa11.26□□□□□ -0.61
PTPN7-213ENST00000486116 FAM102BQ5T8I3 360 aa11.26□□□□□ -0.61
PTPN7-213ENST00000486116 UTP14CQ5TAP6 766 aaKnown RBP11.26□□□□□ -0.61
PTPN7-213ENST00000486116 RSPH3Q86UC2 560 aa11.26□□□□□ -0.61
PTPN7-213ENST00000486116 VSIG10LQ86VR7 867 aa11.26□□□□□ -0.61
PTPN7-213ENST00000486116 FTSJ3Q8IY81 847 aaKnown RBP11.26□□□□□ -0.61
PTPN7-213ENST00000486116 WNT16Q9UBV4 365 aa11.26□□□□□ -0.61
PTPN7-213ENST00000486116 ZNF215Q9UL58 517 aaPredicted RBP11.26□□□□□ -0.61
PTPN7-213ENST00000486116 CA14Q9ULX7 337 aa11.26□□□□□ -0.61
PTPN7-213ENST00000486116 MYH15Q9Y2K3 1946 aa11.26□□□□□ -0.61
PTPN7-213ENST00000486116 RALGAPA1Q6GYQ0 2036 aa11.26□□□□□ -0.61
PTPN7-213ENST00000486116 CNOT1A5YKK6 2376 aaKnown RBP11.25□□□□□ -0.61
PTPN7-213ENST00000486116 MBLAC1A4D2B0 266 aaPredicted RBP11.25□□□□□ -0.61
PTPN7-213ENST00000486116 ZNF316A6NFI3 1004 aaPredicted RBP11.25□□□□□ -0.61
PTPN7-213ENST00000486116 C2orf71A6NGG8 1288 aa11.25□□□□□ -0.61
PTPN7-213ENST00000486116 MGEA5O60502 916 aa11.25□□□□□ -0.61
PTPN7-213ENST00000486116 RAB11FIP3O75154 756 aa11.25□□□□□ -0.61
PTPN7-213ENST00000486116 ZFYP08048 801 aaPredicted RBP11.25□□□□□ -0.61
PTPN7-213ENST00000486116 FGRP09769 529 aa11.25□□□□□ -0.61
PTPN7-213ENST00000486116 GLULP15104 373 aa11.25□□□□□ -0.61
PTPN7-213ENST00000486116 LAG3P18627 525 aa11.25□□□□□ -0.61
PTPN7-213ENST00000486116 GHRHRQ02643 423 aa11.25□□□□□ -0.61
PTPN7-213ENST00000486116 ATAT1Q5SQI0 421 aa11.25□□□□□ -0.61
PTPN7-213ENST00000486116 XRRA1Q6P2D8 792 aa11.25□□□□□ -0.61
PTPN7-213ENST00000486116 METTL7BQ6UX53 244 aa11.25□□□□□ -0.61
PTPN7-213ENST00000486116 SIRT2Q8IXJ6 389 aa11.25□□□□□ -0.61
PTPN7-213ENST00000486116 ACSF2Q96CM8 615 aaPredicted RBP11.25□□□□□ -0.61
PTPN7-213ENST00000486116 ZBTB10Q96DT7 871 aa11.25□□□□□ -0.61
PTPN7-213ENST00000486116 PARD6AQ9NPB6 346 aa11.25□□□□□ -0.61
PTPN7-213ENST00000486116 TCP11L1Q9NUJ3 509 aa11.25□□□□□ -0.61
PTPN7-213ENST00000486116 TUBE1Q9UJT0 475 aa11.25□□□□□ -0.61
PTPN7-213ENST00000486116 SQORQ9Y6N5 450 aa11.25□□□□□ -0.61
PTPN7-213ENST00000486116 SPTLC1O15269 473 aa11.24□□□□□ -0.61
PTPN7-213ENST00000486116 RFX1P22670 979 aa11.24□□□□□ -0.61
PTPN7-213ENST00000486116 PDE4AP27815 886 aa11.24□□□□□ -0.61
PTPN7-213ENST00000486116 PBX3P40426 434 aa11.24□□□□□ -0.61
PTPN7-213ENST00000486116 DMWDQ09019 674 aa11.24□□□□□ -0.61
PTPN7-213ENST00000486116 PPFIA1Q13136 1202 aa11.24□□□□□ -0.61
PTPN7-213ENST00000486116 PAK2Q13177 524 aa11.24□□□□□ -0.61
PTPN7-213ENST00000486116 SEMA3FQ13275 785 aa11.24□□□□□ -0.61
PTPN7-213ENST00000486116 QRICH1Q2TAL8 776 aa11.24□□□□□ -0.61
PTPN7-213ENST00000486116 STOX1Q6ZVD7 989 aa11.24□□□□□ -0.61
PTPN7-213ENST00000486116 CYFIP1Q7L576 1253 aa11.24□□□□□ -0.61
PTPN7-213ENST00000486116 TMC7Q7Z402 723 aa11.24□□□□□ -0.61
PTPN7-213ENST00000486116 ADGRF4Q8IZF3 695 aa11.24□□□□□ -0.61
PTPN7-213ENST00000486116 MRPL43Q8N983 215 aaKnown RBP11.24□□□□□ -0.61
PTPN7-213ENST00000486116 RSAD2Q8WXG1 361 aa11.24□□□□□ -0.61
PTPN7-213ENST00000486116 PUF60Q9UHX1 559 aaKnown RBP11.24□□□□□ -0.61
PTPN7-213ENST00000486116 ANAPC4Q9UJX5 808 aa11.24□□□□□ -0.61
PTPN7-213ENST00000486116 USP18Q9UMW8 372 aa11.24□□□□□ -0.61
PTPN7-213ENST00000486116 MRPL11Q9Y3B7 192 aaKnown RBP11.24□□□□□ -0.61
PTPN7-213ENST00000486116 PCDHB7Q9Y5E2 793 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms