RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 VPS53Q5VIR6 699 aa11.36□□□□□ -0.59
SND1-213ENST00000486037 CASC1Q6TDU7 716 aa11.36□□□□□ -0.59
SND1-213ENST00000486037 TSHZ1Q6ZSZ6 1077 aa11.36□□□□□ -0.59
SND1-213ENST00000486037 IFNLR1Q8IU57 520 aaPredicted RBP11.36□□□□□ -0.59
SND1-213ENST00000486037 C12orf76Q8N812 135 aaPredicted RBP11.36□□□□□ -0.59
SND1-213ENST00000486037 RASGRP4Q8TDF6 673 aa11.36□□□□□ -0.59
SND1-213ENST00000486037 GPR20Q99678 358 aa11.36□□□□□ -0.59
SND1-213ENST00000486037 TMEM260Q9NX78 707 aa11.36□□□□□ -0.59
SND1-213ENST00000486037 FRYQ5TBA9 3013 aa11.36□□□□□ -0.59
SND1-213ENST00000486037 FANCMQ8IYD8 2048 aa11.36□□□□□ -0.59
SND1-213ENST00000486037 CCDC171Q6TFL3 1326 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 SPEGQ15772 3267 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 CFBP00751 764 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 FGRP09769 529 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 HSD17B4P51659 736 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 UBE3AQ05086 875 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 NMIQ13287 307 aaPredicted RBP11.35□□□□□ -0.59
SND1-213ENST00000486037 PGM5Q15124 567 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 QRICH1Q2TAL8 776 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 RRP12Q5JTH9 1297 aaKnown RBP11.35□□□□□ -0.59
SND1-213ENST00000486037 VSIG10LQ86VR7 867 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 ADGRF4Q8IZF3 695 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 ZDHHC14Q8IZN3 488 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 SIX5Q8N196 739 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 COLGALT1Q8NBJ5 622 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 DNAJB3Q8WWF6 145 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 RUBCNQ92622 972 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 TBC1D32Q96NH3 1257 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 ADAM7Q9H2U9 754 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 TMX1Q9H3N1 280 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 AAASQ9NRG9 546 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 DIAPH3Q9NSV4 1193 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 LOXHD1Q8IVV2 1947 aa11.35□□□□□ -0.59
SND1-213ENST00000486037 SGSM2O43147 1006 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 NARSO43776 548 aaKnown RBP11.34□□□□□ -0.59
SND1-213ENST00000486037 MGEA5O60502 916 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 ZFYP08048 801 aaPredicted RBP11.34□□□□□ -0.59
SND1-213ENST00000486037 HSPD1P10809 573 aaKnown RBP11.34□□□□□ -0.59
SND1-213ENST00000486037 GNAT1P11488 350 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 SCG2P13521 617 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 HOXB8P17481 243 aaPredicted RBP11.34□□□□□ -0.59
SND1-213ENST00000486037 HOXA13P31271 388 aaPredicted RBP11.34□□□□□ -0.59
SND1-213ENST00000486037 ZMYM1Q5SVZ6 1142 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 MARCH8Q5T0T0 291 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 SPOUT1Q5T280 376 aaKnown RBP11.34□□□□□ -0.59
SND1-213ENST00000486037 FAM102BQ5T8I3 360 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 CWC27Q6UX04 472 aaKnown RBP11.34□□□□□ -0.59
SND1-213ENST00000486037 CYFIP1Q7L576 1253 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 MCF2L2Q86YR7 1114 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 THNSL1Q8IYQ7 743 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 TDRD5Q8NAT2 981 aaKnown RBP11.34□□□□□ -0.59
SND1-213ENST00000486037 SUMF1Q8NBK3 374 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 FAM227BQ96M60 508 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 TCF25Q9BQ70 676 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 SEMA4AQ9H3S1 761 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 CWH43Q9H720 699 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 TOMM22Q9NS69 142 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 TCP11L1Q9NUJ3 509 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 TYW1Q9NV66 732 aaKnown RBP11.34□□□□□ -0.59
SND1-213ENST00000486037 ANAPC4Q9UJX5 808 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 HCFC2Q9Y5Z7 792 aa11.34□□□□□ -0.59
SND1-213ENST00000486037 PKD1L2Q7Z442 2459 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 A0A0D9SFI3 127 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 DCDC2BA2VCK2 349 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 KRBA1A5PL33 1030 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 TBKBP1A7MCY6 615 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 HIP1O00291 1037 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 PPP1R11O60927 126 aaPredicted RBP11.33□□□□□ -0.6
SND1-213ENST00000486037 SRGAP2BP0DMP2 458 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 PBX3P40426 434 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 SP4Q02446 784 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 TMEM62Q0P6H9 643 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 RARS2Q5T160 578 aaKnown RBP11.33□□□□□ -0.6
SND1-213ENST00000486037 KCNV1Q6PIU1 500 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 RTP3Q9BQQ7 232 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 USP26Q9BXU7 913 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 C22orf23Q9BZE7 217 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 UPF2Q9HAU5 1272 aaKnown RBP11.33□□□□□ -0.6
SND1-213ENST00000486037 PADI3Q9ULW8 664 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 PCDHB12Q9Y5F1 795 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 DENND4AQ7Z401 1863 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 KAT6AQ92794 2004 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 MYH6P13533 1939 aa11.33□□□□□ -0.6
SND1-213ENST00000486037 CACNA1IQ9P0X4 2223 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 FSD2A1L4K1 749 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 POTEMA6NI47 508 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 NOP56O00567 594 aaKnown RBP11.32□□□□□ -0.6
SND1-213ENST00000486037 EIF5BO60841 1220 aaKnown RBP11.32□□□□□ -0.6
SND1-213ENST00000486037 SP9P0CG40 484 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 STAG3L1P0CL83 205 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 TGFB3P10600 412 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 MRPS6P82932 125 aaKnown RBP11.32□□□□□ -0.6
SND1-213ENST00000486037 MRPS9P82933 396 aaKnown RBP11.32□□□□□ -0.6
SND1-213ENST00000486037 GHRHRQ02643 423 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 TMEM266Q2M3C6 531 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 POTEGQ6S5H5 508 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 STOX1Q6ZVD7 989 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 MRPS27Q92552 414 aaKnown RBP11.32□□□□□ -0.6
SND1-213ENST00000486037 CASP10Q92851 521 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 NECTIN4Q96NY8 510 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms