RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 GINS2Q9Y248 185 aa19.98■□□□□ 0.79
COL6A1-204ENST00000486023 PCDHA10Q9Y5I2 948 aa19.98■□□□□ 0.79
COL6A1-204ENST00000486023 CDY2AQ9Y6F7 541 aa19.98■□□□□ 0.79
COL6A1-204ENST00000486023 CHD9Q3L8U1 2897 aa19.98■□□□□ 0.79
COL6A1-204ENST00000486023 TANC1Q9C0D5 1861 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 IGKV6D-21A0A0A0MT36 114 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 MBLAC1A4D2B0 266 aaPredicted RBP19.97■□□□□ 0.79
COL6A1-204ENST00000486023 HBP1O60381 514 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 ARHGEF15O94989 841 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 KLRC1P26715 233 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 SLC26A2P50443 739 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 NPY5RQ15761 445 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 FAM26DQ5JW98 314 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 LRCH2Q5VUJ6 765 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 MTHFD1LQ6UB35 978 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 KRT25Q7Z3Z0 450 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 OXER1Q8TDS5 423 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 ATP8B4Q8TF62 1192 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 WASF1Q92558 559 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 PHF20Q9BVI0 1012 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 DISC1Q9NRI5 854 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 STK36Q9NRP7 1315 aa19.97■□□□□ 0.79
COL6A1-204ENST00000486023 M0QZ92 97 aa19.96■□□□□ 0.79
COL6A1-204ENST00000486023 M0R2N6 131 aa19.96■□□□□ 0.79
COL6A1-204ENST00000486023 ATP4AP20648 1035 aa19.96■□□□□ 0.79
COL6A1-204ENST00000486023 IBSPP21815 317 aaPredicted RBP19.96■□□□□ 0.79
COL6A1-204ENST00000486023 MRPS6P82932 125 aaKnown RBP19.96■□□□□ 0.79
COL6A1-204ENST00000486023 TAP1Q03518 808 aa19.96■□□□□ 0.79
COL6A1-204ENST00000486023 ADGRE1Q14246 886 aa19.96■□□□□ 0.79
COL6A1-204ENST00000486023 IER5Q5VY09 327 aa19.96■□□□□ 0.79
COL6A1-204ENST00000486023 PIK3AP1Q6ZUJ8 805 aa19.96■□□□□ 0.79
COL6A1-204ENST00000486023 SPRED2Q7Z698 418 aa19.96■□□□□ 0.79
COL6A1-204ENST00000486023 SMAP1Q8IYB5 467 aaPredicted RBP19.96■□□□□ 0.79
COL6A1-204ENST00000486023 DAGLBQ8NCG7 672 aa19.96■□□□□ 0.79
COL6A1-204ENST00000486023 GTF3C6Q969F1 213 aa19.96■□□□□ 0.79
COL6A1-204ENST00000486023 RAD9AQ99638 391 aa19.96■□□□□ 0.79
COL6A1-204ENST00000486023 TEKT3Q9BXF9 490 aa19.96■□□□□ 0.79
COL6A1-204ENST00000486023 PCDHA2Q9Y5H9 948 aa19.96■□□□□ 0.79
COL6A1-204ENST00000486023 WDR64B1ANS9 1081 aa19.95■□□□□ 0.78
COL6A1-204ENST00000486023 MARCH6O60337 910 aa19.95■□□□□ 0.78
COL6A1-204ENST00000486023 JAK2O60674 1132 aa19.95■□□□□ 0.78
COL6A1-204ENST00000486023 GJB5O95377 273 aa19.95■□□□□ 0.78
COL6A1-204ENST00000486023 FDPSP14324 419 aaKnown RBP19.95■□□□□ 0.78
COL6A1-204ENST00000486023 LPIN1Q14693 890 aa19.95■□□□□ 0.78
COL6A1-204ENST00000486023 C8orf34Q49A92 452 aa19.95■□□□□ 0.78
COL6A1-204ENST00000486023 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.95■□□□□ 0.78
COL6A1-204ENST00000486023 METTL13Q8N6R0 699 aa19.95■□□□□ 0.78
COL6A1-204ENST00000486023 SLC5A5Q92911 643 aa19.95■□□□□ 0.78
COL6A1-204ENST00000486023 PPP1R16BQ96T49 567 aa19.95■□□□□ 0.78
COL6A1-204ENST00000486023 UNC45AQ9H3U1 944 aa19.95■□□□□ 0.78
COL6A1-204ENST00000486023 DDX25Q9UHL0 483 aaKnown RBP19.95■□□□□ 0.78
COL6A1-204ENST00000486023 MGAT3Q09327 533 aa19.94■□□□□ 0.78
COL6A1-204ENST00000486023 Q4G0T1 1027 aa19.94■□□□□ 0.78
COL6A1-204ENST00000486023 ZNF484Q5JVG2 852 aa19.94■□□□□ 0.78
COL6A1-204ENST00000486023 RPAINQ86UA6 219 aa19.94■□□□□ 0.78
COL6A1-204ENST00000486023 RIT2Q99578 217 aa19.94■□□□□ 0.78
COL6A1-204ENST00000486023 MAFBQ9Y5Q3 323 aaPredicted RBP19.94■□□□□ 0.78
COL6A1-204ENST00000486023 CCNT1O60563 726 aaKnown RBP19.93■□□□□ 0.78
COL6A1-204ENST00000486023 CD52P31358 61 aa19.93■□□□□ 0.78
COL6A1-204ENST00000486023 KRT2P35908 639 aa19.93■□□□□ 0.78
COL6A1-204ENST00000486023 TRIM29Q14134 588 aa19.93■□□□□ 0.78
COL6A1-204ENST00000486023 FBXO47Q5MNV8 452 aa19.93■□□□□ 0.78
COL6A1-204ENST00000486023 MIER3Q7Z3K6 550 aa19.93■□□□□ 0.78
COL6A1-204ENST00000486023 USP38Q8NB14 1042 aa19.93■□□□□ 0.78
COL6A1-204ENST00000486023 NSUN7Q8NE18 718 aaKnown RBP19.93■□□□□ 0.78
COL6A1-204ENST00000486023 BBXQ8WY36 941 aaPredicted RBP19.93■□□□□ 0.78
COL6A1-204ENST00000486023 APBB2Q92870 758 aa19.93■□□□□ 0.78
COL6A1-204ENST00000486023 IL17RAQ96F46 866 aa19.93■□□□□ 0.78
COL6A1-204ENST00000486023 BRMS1Q9HCU9 246 aa19.93■□□□□ 0.78
COL6A1-204ENST00000486023 TRPV2Q9Y5S1 764 aa19.93■□□□□ 0.78
COL6A1-204ENST00000486023 A0A0C4DFX4 3053 aa19.93■□□□□ 0.78
COL6A1-204ENST00000486023 EYSQ5T1H1 3165 aa19.92■□□□□ 0.78
COL6A1-204ENST00000486023 CYP3A7-CYP3A51PA0A087WV96 503 aa19.92■□□□□ 0.78
COL6A1-204ENST00000486023 SMIM35A0A1B0GVV1 85 aa19.92■□□□□ 0.78
COL6A1-204ENST00000486023 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.92■□□□□ 0.78
COL6A1-204ENST00000486023 EPOPA6NHQ4 379 aa19.92■□□□□ 0.78
COL6A1-204ENST00000486023 SLC37A4O43826 429 aa19.92■□□□□ 0.78
COL6A1-204ENST00000486023 CYP3A7P24462 503 aa19.92■□□□□ 0.78
COL6A1-204ENST00000486023 NR5A1Q13285 461 aa19.92■□□□□ 0.78
COL6A1-204ENST00000486023 NEK8Q86SG6 692 aa19.92■□□□□ 0.78
COL6A1-204ENST00000486023 CCDC83Q8IWF9 413 aa19.92■□□□□ 0.78
COL6A1-204ENST00000486023 FAM177A1Q8N128 213 aaPredicted RBP19.92■□□□□ 0.78
COL6A1-204ENST00000486023 YME1L1Q96TA2 773 aa19.92■□□□□ 0.78
COL6A1-204ENST00000486023 CELF4Q9BZC1 486 aaKnown RBP19.92■□□□□ 0.78
COL6A1-204ENST00000486023 AGO3Q9H9G7 860 aaKnown RBP19.92■□□□□ 0.78
COL6A1-204ENST00000486023 NRBP2Q9NSY0 501 aa19.92■□□□□ 0.78
COL6A1-204ENST00000486023 LIMCH1Q9UPQ0 1083 aa19.92■□□□□ 0.78
COL6A1-204ENST00000486023 INSL6Q9Y581 213 aa19.92■□□□□ 0.78
COL6A1-204ENST00000486023 FAM205CA6NFA0 338 aa19.91■□□□□ 0.78
COL6A1-204ENST00000486023 PSMD10O75832 226 aa19.91■□□□□ 0.78
COL6A1-204ENST00000486023 JAK3P52333 1124 aa19.91■□□□□ 0.78
COL6A1-204ENST00000486023 GUCY1B3Q02153 619 aa19.91■□□□□ 0.78
COL6A1-204ENST00000486023 NFX1Q12986 1120 aaKnown RBP19.91■□□□□ 0.78
COL6A1-204ENST00000486023 UGCGQ16739 394 aa19.91■□□□□ 0.78
COL6A1-204ENST00000486023 TMEM266Q2M3C6 531 aa19.91■□□□□ 0.78
COL6A1-204ENST00000486023 EARS2Q5JPH6 523 aaKnown RBP19.91■□□□□ 0.78
COL6A1-204ENST00000486023 TSHZ1Q6ZSZ6 1077 aa19.91■□□□□ 0.78
COL6A1-204ENST00000486023 KIAA0319LQ8IZA0 1049 aa19.91■□□□□ 0.78
COL6A1-204ENST00000486023 NME8Q8N427 588 aa19.91■□□□□ 0.78
COL6A1-204ENST00000486023 TOP1MTQ969P6 601 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms