RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 ZMYND12Q9H0C1 365 aa23.78■■□□□ 1.4
LMBR1-217ENST00000485985 IGLV3-22A0A075B6J6 115 aa23.77■■□□□ 1.4
LMBR1-217ENST00000485985 PRPF3O43395 683 aaKnown RBP23.77■■□□□ 1.4
LMBR1-217ENST00000485985 CCNE2O96020 404 aa23.77■■□□□ 1.4
LMBR1-217ENST00000485985 IGBP1P78318 339 aa23.77■■□□□ 1.4
LMBR1-217ENST00000485985 PUS10Q3MIT2 529 aaKnown RBP23.77■■□□□ 1.4
LMBR1-217ENST00000485985 TTC3P53804 2025 aa23.77■■□□□ 1.4
LMBR1-217ENST00000485985 GHRP10912 638 aa23.76■■□□□ 1.39
LMBR1-217ENST00000485985 INSRRP14616 1297 aa23.76■■□□□ 1.39
LMBR1-217ENST00000485985 PSMA5P28066 241 aa23.76■■□□□ 1.39
LMBR1-217ENST00000485985 TOB2Q14106 344 aaPredicted RBP23.76■■□□□ 1.39
LMBR1-217ENST00000485985 TCEAL5Q5H9L2 206 aa23.76■■□□□ 1.39
LMBR1-217ENST00000485985 NIPA1Q7RTP0 329 aa23.76■■□□□ 1.39
LMBR1-217ENST00000485985 DNAJB3Q8WWF6 145 aa23.76■■□□□ 1.39
LMBR1-217ENST00000485985 AZI2Q9H6S1 392 aa23.76■■□□□ 1.39
LMBR1-217ENST00000485985 NCOA5Q9HCD5 579 aaKnown RBP23.76■■□□□ 1.39
LMBR1-217ENST00000485985 H3BQ06 376 aaPredicted RBP23.75■■□□□ 1.39
LMBR1-217ENST00000485985 DDX39AO00148 427 aaKnown RBP23.75■■□□□ 1.39
LMBR1-217ENST00000485985 PDIA3P30101 505 aaKnown RBP23.75■■□□□ 1.39
LMBR1-217ENST00000485985 SSTR3P32745 418 aaPredicted RBP23.75■■□□□ 1.39
LMBR1-217ENST00000485985 EVCP57679 992 aa23.75■■□□□ 1.39
LMBR1-217ENST00000485985 LPIN1Q14693 890 aa23.75■■□□□ 1.39
LMBR1-217ENST00000485985 PLCB4Q15147 1175 aa23.75■■□□□ 1.39
LMBR1-217ENST00000485985 REXO1Q8N1G1 1221 aaKnown RBP23.75■■□□□ 1.39
LMBR1-217ENST00000485985 TRAPPC12Q8WVT3 735 aa23.75■■□□□ 1.39
LMBR1-217ENST00000485985 PABPC5Q96DU9 382 aaKnown RBP23.75■■□□□ 1.39
LMBR1-217ENST00000485985 IL17RAQ96F46 866 aa23.75■■□□□ 1.39
LMBR1-217ENST00000485985 UIMC1Q96RL1 719 aa23.75■■□□□ 1.39
LMBR1-217ENST00000485985 NSUN3Q9H649 340 aaKnown RBP23.75■■□□□ 1.39
LMBR1-217ENST00000485985 TRPC6Q9Y210 931 aa23.75■■□□□ 1.39
LMBR1-217ENST00000485985 MYO7AQ13402 2215 aa23.74■■□□□ 1.39
LMBR1-217ENST00000485985 ATG7O95352 703 aa23.74■■□□□ 1.39
LMBR1-217ENST00000485985 CYP3A4P08684 503 aa23.74■■□□□ 1.39
LMBR1-217ENST00000485985 ZNF76P36508 570 aa23.74■■□□□ 1.39
LMBR1-217ENST00000485985 CCT2P78371 535 aaKnown RBP23.74■■□□□ 1.39
LMBR1-217ENST00000485985 COL19A1Q14993 1142 aa23.74■■□□□ 1.39
LMBR1-217ENST00000485985 RUFY3Q7L099 469 aa23.74■■□□□ 1.39
LMBR1-217ENST00000485985 PLPPR4Q7Z2D5 763 aa23.74■■□□□ 1.39
LMBR1-217ENST00000485985 PLA2G4DQ86XP0 818 aa23.74■■□□□ 1.39
LMBR1-217ENST00000485985 FIBCD1Q8N539 461 aa23.74■■□□□ 1.39
LMBR1-217ENST00000485985 RASGRP4Q8TDF6 673 aa23.74■■□□□ 1.39
LMBR1-217ENST00000485985 RNF26Q9BY78 433 aaPredicted RBP23.74■■□□□ 1.39
LMBR1-217ENST00000485985 FAM49AQ9H0Q0 323 aaPredicted RBP23.74■■□□□ 1.39
LMBR1-217ENST00000485985 ZSWIM6Q9HCJ5 1215 aa23.74■■□□□ 1.39
LMBR1-217ENST00000485985 C6orf50Q9HD87 102 aa23.74■■□□□ 1.39
LMBR1-217ENST00000485985 CDY2AQ9Y6F7 541 aa23.74■■□□□ 1.39
LMBR1-217ENST00000485985 IGKV6D-21A0A0A0MT36 114 aa23.73■■□□□ 1.39
LMBR1-217ENST00000485985 RRN3P2A6NIE6 340 aa23.73■■□□□ 1.39
LMBR1-217ENST00000485985 DHX15O43143 795 aaKnown RBP23.73■■□□□ 1.39
LMBR1-217ENST00000485985 EPB41L2O43491 1005 aaKnown RBP23.73■■□□□ 1.39
LMBR1-217ENST00000485985 IFNAR1P17181 557 aa23.73■■□□□ 1.39
LMBR1-217ENST00000485985 STAT5BP51692 787 aa23.73■■□□□ 1.39
LMBR1-217ENST00000485985 CCDC60Q8IWA6 550 aaPredicted RBP23.73■■□□□ 1.39
LMBR1-217ENST00000485985 CCDC12Q8WUD4 166 aaPredicted RBP23.73■■□□□ 1.39
LMBR1-217ENST00000485985 SLC26A6Q9BXS9 759 aa23.73■■□□□ 1.39
LMBR1-217ENST00000485985 MRPS6P82932 125 aaKnown RBP23.72■■□□□ 1.39
LMBR1-217ENST00000485985 FBXO47Q5MNV8 452 aa23.72■■□□□ 1.39
LMBR1-217ENST00000485985 ABHD15Q6UXT9 468 aa23.72■■□□□ 1.39
LMBR1-217ENST00000485985 EP400NLQ6ZTU2 488 aa23.72■■□□□ 1.39
LMBR1-217ENST00000485985 RSPH3Q86UC2 560 aa23.72■■□□□ 1.39
LMBR1-217ENST00000485985 VPS54Q9P1Q0 977 aa23.72■■□□□ 1.39
LMBR1-217ENST00000485985 PRR33A8MZF0 331 aa23.71■■□□□ 1.39
LMBR1-217ENST00000485985 C5orf67F2Z3F1 127 aa23.71■■□□□ 1.39
LMBR1-217ENST00000485985 IPO5O00410 1097 aaKnown RBP23.71■■□□□ 1.39
LMBR1-217ENST00000485985 RB1P06400 928 aa23.71■■□□□ 1.39
LMBR1-217ENST00000485985 ALADP13716 330 aa23.71■■□□□ 1.39
LMBR1-217ENST00000485985 CTNNB1P35222 781 aa23.71■■□□□ 1.39
LMBR1-217ENST00000485985 UPF3BQ9BZI7 483 aaKnown RBP23.71■■□□□ 1.39
LMBR1-217ENST00000485985 POTEB3A0JP26 581 aa23.7■■□□□ 1.38
LMBR1-217ENST00000485985 ENPP3O14638 875 aa23.7■■□□□ 1.38
LMBR1-217ENST00000485985 NEFLP07196 543 aa23.7■■□□□ 1.38
LMBR1-217ENST00000485985 LINC00271P0C7V0 271 aa23.7■■□□□ 1.38
LMBR1-217ENST00000485985 GNA11P29992 359 aa23.7■■□□□ 1.38
LMBR1-217ENST00000485985 BMPR1AP36894 532 aa23.7■■□□□ 1.38
LMBR1-217ENST00000485985 AKAP17AQ02040 695 aaKnown RBP23.7■■□□□ 1.38
LMBR1-217ENST00000485985 TMEM62Q0P6H9 643 aa23.7■■□□□ 1.38
LMBR1-217ENST00000485985 POTEBQ6S5H4 581 aa23.7■■□□□ 1.38
LMBR1-217ENST00000485985 TSHZ1Q6ZSZ6 1077 aa23.7■■□□□ 1.38
LMBR1-217ENST00000485985 CCDC148Q8NFR7 591 aa23.7■■□□□ 1.38
LMBR1-217ENST00000485985 LENG9Q96B70 501 aa23.7■■□□□ 1.38
LMBR1-217ENST00000485985 LARP6Q9BRS8 491 aaKnown RBP23.7■■□□□ 1.38
LMBR1-217ENST00000485985 AGO3Q9H9G7 860 aaKnown RBP23.7■■□□□ 1.38
LMBR1-217ENST00000485985 RC3H2Q9HBD1 1191 aaKnown RBP23.7■■□□□ 1.38
LMBR1-217ENST00000485985 CLDND1Q9NY35 253 aa23.7■■□□□ 1.38
LMBR1-217ENST00000485985 FAM50BQ9Y247 325 aa23.7■■□□□ 1.38
LMBR1-217ENST00000485985 MUC6Q6W4X9 2439 aa23.7■■□□□ 1.38
LMBR1-217ENST00000485985 ADGRA3Q8IWK6 1321 aa23.69■■□□□ 1.38
LMBR1-217ENST00000485985 BACH1O14867 736 aa23.69■■□□□ 1.38
LMBR1-217ENST00000485985 EDIL3O43854 480 aa23.69■■□□□ 1.38
LMBR1-217ENST00000485985 SLC26A2P50443 739 aa23.69■■□□□ 1.38
LMBR1-217ENST00000485985 SETQ01105 290 aaPredicted RBP23.69■■□□□ 1.38
LMBR1-217ENST00000485985 MCTP2Q6DN12 878 aa23.69■■□□□ 1.38
LMBR1-217ENST00000485985 LINC01599Q8WXQ3 324 aa23.69■■□□□ 1.38
LMBR1-217ENST00000485985 ZNF577Q9BSK1 485 aa23.69■■□□□ 1.38
LMBR1-217ENST00000485985 C11orf84Q9BUA3 381 aaPredicted RBP23.69■■□□□ 1.38
LMBR1-217ENST00000485985 RWDD3Q9Y3V2 267 aa23.69■■□□□ 1.38
LMBR1-217ENST00000485985 PCDHA2Q9Y5H9 948 aa23.69■■□□□ 1.38
LMBR1-217ENST00000485985 CYP46A1Q9Y6A2 500 aa23.69■■□□□ 1.38
LMBR1-217ENST00000485985 GRM6O15303 877 aa23.68■■□□□ 1.38
LMBR1-217ENST00000485985 NCK2O43639 380 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms