RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 POTEBQ6S5H4 581 aa23.19■■□□□ 1.3
CHRD-215ENST00000485883 CRIPAKQ8N1N5 446 aa23.19■■□□□ 1.3
CHRD-215ENST00000485883 UIMC1Q96RL1 719 aa23.19■■□□□ 1.3
CHRD-215ENST00000485883 C11orf84Q9BUA3 381 aaPredicted RBP23.19■■□□□ 1.3
CHRD-215ENST00000485883 PADI3Q9ULW8 664 aa23.19■■□□□ 1.3
CHRD-215ENST00000485883 ATG2AQ2TAZ0 1938 aa23.18■■□□□ 1.3
CHRD-215ENST00000485883 GOLGA8AA7E2F4 631 aa23.18■■□□□ 1.3
CHRD-215ENST00000485883 GOLGA8BA8MQT2 603 aa23.18■■□□□ 1.3
CHRD-215ENST00000485883 MEIS1O00470 390 aa23.18■■□□□ 1.3
CHRD-215ENST00000485883 ADAMTS3O15072 1205 aa23.18■■□□□ 1.3
CHRD-215ENST00000485883 ATG7O95352 703 aa23.18■■□□□ 1.3
CHRD-215ENST00000485883 FOSP01100 380 aaPredicted RBP23.18■■□□□ 1.3
CHRD-215ENST00000485883 GTF2F1P35269 517 aaKnown RBP eCLIP23.18■■□□□ 1.3
CHRD-215ENST00000485883 SREBF1P36956 1147 aa23.18■■□□□ 1.3
CHRD-215ENST00000485883 CLK2P49760 499 aaKnown RBP23.18■■□□□ 1.3
CHRD-215ENST00000485883 DLX2Q07687 328 aaPredicted RBP23.18■■□□□ 1.3
CHRD-215ENST00000485883 HYAL1Q12794 435 aa23.18■■□□□ 1.3
CHRD-215ENST00000485883 PUS10Q3MIT2 529 aaKnown RBP23.18■■□□□ 1.3
CHRD-215ENST00000485883 PPP1R18Q6NYC8 613 aa23.18■■□□□ 1.3
CHRD-215ENST00000485883 CELF4Q9BZC1 486 aaKnown RBP23.18■■□□□ 1.3
CHRD-215ENST00000485883 ALG13Q9NP73 1137 aaKnown RBP23.18■■□□□ 1.3
CHRD-215ENST00000485883 BARHL2Q9NY43 387 aa23.18■■□□□ 1.3
CHRD-215ENST00000485883 MRPL42Q9Y6G3 142 aaKnown RBP23.18■■□□□ 1.3
CHRD-215ENST00000485883 IGSF9BQ9UPX0 1349 aa23.17■■□□□ 1.3
CHRD-215ENST00000485883 KLF18A0A0U1RQI7 1052 aa23.17■■□□□ 1.3
CHRD-215ENST00000485883 GATMP50440 423 aa23.17■■□□□ 1.3
CHRD-215ENST00000485883 CAMK1Q14012 370 aa23.17■■□□□ 1.3
CHRD-215ENST00000485883 TMEM266Q2M3C6 531 aa23.17■■□□□ 1.3
CHRD-215ENST00000485883 MTHFD1LQ6UB35 978 aa23.17■■□□□ 1.3
CHRD-215ENST00000485883 LMAN2LQ9H0V9 348 aa23.17■■□□□ 1.3
CHRD-215ENST00000485883 TMX1Q9H3N1 280 aa23.17■■□□□ 1.3
CHRD-215ENST00000485883 RWDD3Q9Y3V2 267 aa23.17■■□□□ 1.3
CHRD-215ENST00000485883 IGKV6D-21A0A0A0MT36 114 aa23.16■■□□□ 1.3
CHRD-215ENST00000485883 FAM86B1E9PN63 330 aa23.16■■□□□ 1.3
CHRD-215ENST00000485883 M0QZ92 97 aa23.16■■□□□ 1.3
CHRD-215ENST00000485883 RPLP2P05387 115 aaKnown RBP23.16■■□□□ 1.3
CHRD-215ENST00000485883 FAM86B2P0C5J1 330 aa23.16■■□□□ 1.3
CHRD-215ENST00000485883 CPA1P15085 419 aa23.16■■□□□ 1.3
CHRD-215ENST00000485883 CTC1Q2NKJ3 1217 aa23.16■■□□□ 1.3
CHRD-215ENST00000485883 TSGA10IPQ3SY00 556 aa23.16■■□□□ 1.3
CHRD-215ENST00000485883 PAN2Q504Q3 1202 aaKnown RBP23.16■■□□□ 1.3
CHRD-215ENST00000485883 JAKMIP3Q5VZ66 844 aa23.16■■□□□ 1.3
CHRD-215ENST00000485883 PLAGL2Q9UPG8 496 aa23.16■■□□□ 1.3
CHRD-215ENST00000485883 SQORQ9Y6N5 450 aa23.16■■□□□ 1.3
CHRD-215ENST00000485883 SMIM35A0A1B0GVV1 85 aa23.15■■□□□ 1.3
CHRD-215ENST00000485883 DNAJB1P25685 340 aa23.15■■□□□ 1.3
CHRD-215ENST00000485883 KLRC1P26715 233 aa23.15■■□□□ 1.3
CHRD-215ENST00000485883 ADD1P35611 737 aaKnown RBP23.15■■□□□ 1.3
CHRD-215ENST00000485883 ZNF76P36508 570 aa23.15■■□□□ 1.3
CHRD-215ENST00000485883 PAK2Q13177 524 aa23.15■■□□□ 1.3
CHRD-215ENST00000485883 AP3B2Q13367 1082 aa23.15■■□□□ 1.3
CHRD-215ENST00000485883 CLUL1Q15846 466 aa23.15■■□□□ 1.3
CHRD-215ENST00000485883 ERICH6BQ5W0A0 696 aa23.15■■□□□ 1.3
CHRD-215ENST00000485883 ABHD15Q6UXT9 468 aa23.15■■□□□ 1.3
CHRD-215ENST00000485883 NPAS4Q8IUM7 802 aa23.15■■□□□ 1.3
CHRD-215ENST00000485883 CCDC60Q8IWA6 550 aaPredicted RBP23.15■■□□□ 1.3
CHRD-215ENST00000485883 TNPO1Q92973 898 aaKnown RBP23.15■■□□□ 1.3
CHRD-215ENST00000485883 FTHL17Q9BXU8 183 aa23.15■■□□□ 1.3
CHRD-215ENST00000485883 CDHR5Q9HBB8 845 aa23.15■■□□□ 1.3
CHRD-215ENST00000485883 NAP1L2Q9ULW6 460 aaPredicted RBP23.15■■□□□ 1.3
CHRD-215ENST00000485883 GINS2Q9Y248 185 aa23.15■■□□□ 1.3
CHRD-215ENST00000485883 HCN4Q9Y3Q4 1203 aa23.15■■□□□ 1.3
CHRD-215ENST00000485883 C5orf42Q9H799 3197 aa23.14■■□□□ 1.3
CHRD-215ENST00000485883 LINC01565O15544 149 aa23.14■■□□□ 1.29
CHRD-215ENST00000485883 DHX15O43143 795 aaKnown RBP23.14■■□□□ 1.29
CHRD-215ENST00000485883 MMP1P03956 469 aa23.14■■□□□ 1.29
CHRD-215ENST00000485883 IBSPP21815 317 aaPredicted RBP23.14■■□□□ 1.29
CHRD-215ENST00000485883 KRT76Q01546 638 aa23.14■■□□□ 1.29
CHRD-215ENST00000485883 ZP2Q05996 745 aa23.14■■□□□ 1.29
CHRD-215ENST00000485883 CMTR2Q8IYT2 770 aaKnown RBP23.14■■□□□ 1.29
CHRD-215ENST00000485883 PLVAPQ9BX97 442 aa23.14■■□□□ 1.29
CHRD-215ENST00000485883 IGFLR1Q9H665 355 aa23.14■■□□□ 1.29
CHRD-215ENST00000485883 KDM3AQ9Y4C1 1321 aa23.13■■□□□ 1.29
CHRD-215ENST00000485883 hCG_1984214I3L0E3 225 aa23.13■■□□□ 1.29
CHRD-215ENST00000485883 BACH1O14867 736 aa23.13■■□□□ 1.29
CHRD-215ENST00000485883 MGEA5O60502 916 aa23.13■■□□□ 1.29
CHRD-215ENST00000485883 TBX10O75333 385 aa23.13■■□□□ 1.29
CHRD-215ENST00000485883 ITGB1P05556 798 aa23.13■■□□□ 1.29
CHRD-215ENST00000485883 SCG2P13521 617 aa23.13■■□□□ 1.29
CHRD-215ENST00000485883 ATP4AP20648 1035 aa23.13■■□□□ 1.29
CHRD-215ENST00000485883 NFX1Q12986 1120 aaKnown RBP23.13■■□□□ 1.29
CHRD-215ENST00000485883 NIPA1Q7RTP0 329 aa23.13■■□□□ 1.29
CHRD-215ENST00000485883 PLA2G4DQ86XP0 818 aa23.13■■□□□ 1.29
CHRD-215ENST00000485883 TEX2Q8IWB9 1127 aa23.13■■□□□ 1.29
CHRD-215ENST00000485883 NME8Q8N427 588 aa23.13■■□□□ 1.29
CHRD-215ENST00000485883 ZNF713Q8N859 430 aaPredicted RBP23.13■■□□□ 1.29
CHRD-215ENST00000485883 TMEM40Q8WWA1 233 aa23.13■■□□□ 1.29
CHRD-215ENST00000485883 CRYGNQ8WXF5 182 aa23.13■■□□□ 1.29
CHRD-215ENST00000485883 PPP4R2Q9NY27 417 aa23.13■■□□□ 1.29
CHRD-215ENST00000485883 LOXHD1Q8IVV2 1947 aa23.13■■□□□ 1.29
CHRD-215ENST00000485883 IGLV3-22A0A075B6J6 115 aa23.12■■□□□ 1.29
CHRD-215ENST00000485883 NCK2O43639 380 aa23.12■■□□□ 1.29
CHRD-215ENST00000485883 HBP1O60381 514 aa23.12■■□□□ 1.29
CHRD-215ENST00000485883 IRS1P35568 1242 aa23.12■■□□□ 1.29
CHRD-215ENST00000485883 SLC26A2P50443 739 aa23.12■■□□□ 1.29
CHRD-215ENST00000485883 PFKFB3Q16875 520 aaPredicted RBP23.12■■□□□ 1.29
CHRD-215ENST00000485883 ADGRD2Q7Z7M1 963 aa23.12■■□□□ 1.29
CHRD-215ENST00000485883 KIAA0319LQ8IZA0 1049 aa23.12■■□□□ 1.29
CHRD-215ENST00000485883 KLHL23Q8NBE8 558 aa23.12■■□□□ 1.29
CHRD-215ENST00000485883 SPPL3Q8TCT6 385 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms