RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 JAKMIP1Q96N16 626 aaKnown RBP15.64■□□□□ 0.09
SCAF4-206ENST00000485790 PLVAPQ9BX97 442 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 NSUN3Q9H649 340 aaKnown RBP15.64■□□□□ 0.09
SCAF4-206ENST00000485790 FAM217BQ9NTX9 383 aaPredicted RBP15.64■□□□□ 0.09
SCAF4-206ENST00000485790 TMEM260Q9NX78 707 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 LRFN2Q9ULH4 789 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 PADI3Q9ULW8 664 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 C5orf67F2Z3F1 127 aa15.63■□□□□ 0.09
SCAF4-206ENST00000485790 IPO5O00410 1097 aaKnown RBP15.63■□□□□ 0.09
SCAF4-206ENST00000485790 CD52P31358 61 aa15.63■□□□□ 0.09
SCAF4-206ENST00000485790 CLK2P49760 499 aaKnown RBP15.63■□□□□ 0.09
SCAF4-206ENST00000485790 APOBRQ0VD83 1088 aa15.63■□□□□ 0.09
SCAF4-206ENST00000485790 SWSAP1Q6NVH7 229 aa15.63■□□□□ 0.09
SCAF4-206ENST00000485790 PDXDC2PQ6P474 469 aa15.63■□□□□ 0.09
SCAF4-206ENST00000485790 ABHD15Q6UXT9 468 aa15.63■□□□□ 0.09
SCAF4-206ENST00000485790 REXO1Q8N1G1 1221 aaKnown RBP15.63■□□□□ 0.09
SCAF4-206ENST00000485790 ATP8B4Q8TF62 1192 aa15.63■□□□□ 0.09
SCAF4-206ENST00000485790 BRF1Q92994 677 aa15.63■□□□□ 0.09
SCAF4-206ENST00000485790 PPP2R3CQ969Q6 453 aa15.63■□□□□ 0.09
SCAF4-206ENST00000485790 ZNF577Q9BSK1 485 aa15.63■□□□□ 0.09
SCAF4-206ENST00000485790 ZMYND12Q9H0C1 365 aa15.63■□□□□ 0.09
SCAF4-206ENST00000485790 ZNF302Q9NR11 478 aa15.63■□□□□ 0.09
SCAF4-206ENST00000485790 PRRC2BQ5JSZ5 2229 aaKnown RBP15.62■□□□□ 0.09
SCAF4-206ENST00000485790 IGKV6D-21A0A0A0MT36 114 aa15.62■□□□□ 0.09
SCAF4-206ENST00000485790 ESYT2A0FGR8 921 aa15.62■□□□□ 0.09
SCAF4-206ENST00000485790 DDX39AO00148 427 aaKnown RBP15.62■□□□□ 0.09
SCAF4-206ENST00000485790 DGKIO75912 1065 aa15.62■□□□□ 0.09
SCAF4-206ENST00000485790 PSAPP07602 524 aa15.62■□□□□ 0.09
SCAF4-206ENST00000485790 HSPA4P34932 840 aa15.62■□□□□ 0.09
SCAF4-206ENST00000485790 SETQ01105 290 aaPredicted RBP15.62■□□□□ 0.09
SCAF4-206ENST00000485790 TMEM62Q0P6H9 643 aa15.62■□□□□ 0.09
SCAF4-206ENST00000485790 NFX1Q12986 1120 aaKnown RBP15.62■□□□□ 0.09
SCAF4-206ENST00000485790 NAALADL2Q58DX5 795 aa15.62■□□□□ 0.09
SCAF4-206ENST00000485790 PTCRAQ6ISU1 281 aaPredicted RBP15.62■□□□□ 0.09
SCAF4-206ENST00000485790 NPAS4Q8IUM7 802 aa15.62■□□□□ 0.09
SCAF4-206ENST00000485790 FBXL16Q8N461 479 aa15.62■□□□□ 0.09
SCAF4-206ENST00000485790 KCNB2Q92953 911 aa15.62■□□□□ 0.09
SCAF4-206ENST00000485790 PABPC5Q96DU9 382 aaKnown RBP15.62■□□□□ 0.09
SCAF4-206ENST00000485790 AGO3Q9H9G7 860 aaKnown RBP15.62■□□□□ 0.09
SCAF4-206ENST00000485790 PCDHB7Q9Y5E2 793 aa15.62■□□□□ 0.09
SCAF4-206ENST00000485790 TET1Q8NFU7 2136 aa15.62■□□□□ 0.09
SCAF4-206ENST00000485790 MYH6P13533 1939 aa15.62■□□□□ 0.09
SCAF4-206ENST00000485790 XIRP2A4UGR9 3374 aa15.62■□□□□ 0.09
SCAF4-206ENST00000485790 TRIP12Q14669 1992 aaPredicted RBP15.62■□□□□ 0.09
SCAF4-206ENST00000485790 FAM86B1E9PN63 330 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 GPR182O15218 404 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 FAM86B2P0C5J1 330 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 TCEAL5Q5H9L2 206 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 ZNF746Q6NUN9 644 aaPredicted RBP15.61■□□□□ 0.09
SCAF4-206ENST00000485790 SKAP1Q86WV1 359 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 SMAP1Q8IYB5 467 aaPredicted RBP15.61■□□□□ 0.09
SCAF4-206ENST00000485790 GJD3Q8N144 294 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 ZNF710Q8N1W2 664 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 CCDC148Q8NFR7 591 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 TRAPPC12Q8WVT3 735 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 CLP1Q92989 425 aaKnown RBP15.61■□□□□ 0.09
SCAF4-206ENST00000485790 ZNF689Q96CS4 500 aaPredicted RBP15.61■□□□□ 0.09
SCAF4-206ENST00000485790 NRBP2Q9NSY0 501 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 CEP131Q9UPN4 1083 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 GINS2Q9Y248 185 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 SAMM50Q9Y512 469 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 PCDHA10Q9Y5I2 948 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 SNX14Q9Y5W7 946 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 ADGRA3Q8IWK6 1321 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 KDM3AQ9Y4C1 1321 aa15.61■□□□□ 0.09
SCAF4-206ENST00000485790 DENND3A2RUS2 1198 aa15.6■□□□□ 0.09
SCAF4-206ENST00000485790 GRXCR2A6NFK2 248 aa15.6■□□□□ 0.09
SCAF4-206ENST00000485790 MAGEB2O15479 319 aa15.6■□□□□ 0.09
SCAF4-206ENST00000485790 RPS6KA5O75582 802 aa15.6■□□□□ 0.09
SCAF4-206ENST00000485790 CCNE2O96020 404 aa15.6■□□□□ 0.09
SCAF4-206ENST00000485790 RPS6KB1P23443 525 aa15.6■□□□□ 0.09
SCAF4-206ENST00000485790 TMOD1P28289 359 aa15.6■□□□□ 0.09
SCAF4-206ENST00000485790 SSTR3P32745 418 aaPredicted RBP15.6■□□□□ 0.09
SCAF4-206ENST00000485790 PRR16Q569H4 304 aa15.6■□□□□ 0.09
SCAF4-206ENST00000485790 TMEM31Q5JXX7 168 aa15.6■□□□□ 0.09
SCAF4-206ENST00000485790 RTN4RL1Q86UN2 441 aaPredicted RBP15.6■□□□□ 0.09
SCAF4-206ENST00000485790 TRIM22Q8IYM9 498 aa15.6■□□□□ 0.09
SCAF4-206ENST00000485790 CMTR2Q8IYT2 770 aaKnown RBP15.6■□□□□ 0.09
SCAF4-206ENST00000485790 KIAA0319LQ8IZA0 1049 aa15.6■□□□□ 0.09
SCAF4-206ENST00000485790 METTL13Q8N6R0 699 aa15.6■□□□□ 0.09
SCAF4-206ENST00000485790 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.6■□□□□ 0.09
SCAF4-206ENST00000485790 NEK9Q8TD19 979 aa15.6■□□□□ 0.09
SCAF4-206ENST00000485790 BBXQ8WY36 941 aaPredicted RBP15.6■□□□□ 0.09
SCAF4-206ENST00000485790 ZBTB10Q96DT7 871 aa15.6■□□□□ 0.09
SCAF4-206ENST00000485790 IGSF9BQ9UPX0 1349 aa15.6■□□□□ 0.09
SCAF4-206ENST00000485790 COL1A2P08123 1366 aa15.6■□□□□ 0.09
SCAF4-206ENST00000485790 MYH7BA7E2Y1 1941 aa15.59■□□□□ 0.09
SCAF4-206ENST00000485790 DHX15O43143 795 aaKnown RBP15.59■□□□□ 0.09
SCAF4-206ENST00000485790 ALADP13716 330 aa15.59■□□□□ 0.09
SCAF4-206ENST00000485790 CPA1P15085 419 aa15.59■□□□□ 0.09
SCAF4-206ENST00000485790 USP11P51784 963 aa15.59■□□□□ 0.09
SCAF4-206ENST00000485790 CRYBB1P53674 252 aaPredicted RBP15.59■□□□□ 0.09
SCAF4-206ENST00000485790 FAM178BQ8IXR5 827 aa15.59■□□□□ 0.09
SCAF4-206ENST00000485790 P2RX5Q93086 422 aa15.59■□□□□ 0.09
SCAF4-206ENST00000485790 SLC26A6Q9BXS9 759 aa15.59■□□□□ 0.09
SCAF4-206ENST00000485790 RNF26Q9BY78 433 aaPredicted RBP15.59■□□□□ 0.09
SCAF4-206ENST00000485790 C22orf23Q9BZE7 217 aa15.59■□□□□ 0.09
SCAF4-206ENST00000485790 EPHX3Q9H6B9 360 aa15.59■□□□□ 0.09
SCAF4-206ENST00000485790 SH3GLB2Q9NR46 395 aa15.59■□□□□ 0.09
SCAF4-206ENST00000485790 AAASQ9NRG9 546 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms