RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 IGLV3-22A0A075B6J6 115 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 M0QZ92 97 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 DHX15O43143 795 aaKnown RBP13.05□□□□□ -0.32
SCFD1-206ENST00000484733 HBP1O60381 514 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 BMPR1AP36894 532 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 MTHFD1LQ6UB35 978 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 Q6ZUG5 572 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 PLA2G4DQ86XP0 818 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 CELF4Q9BZC1 486 aaKnown RBP13.05□□□□□ -0.32
SCFD1-206ENST00000484733 NSUN3Q9H649 340 aaKnown RBP13.05□□□□□ -0.32
SCFD1-206ENST00000484733 AGO3Q9H9G7 860 aaKnown RBP13.05□□□□□ -0.32
SCFD1-206ENST00000484733 C6orf50Q9HD87 102 aa13.05□□□□□ -0.32
SCFD1-206ENST00000484733 DGKIO75912 1065 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 CCNE2O96020 404 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 COL9A1P20849 921 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 FGD1P98174 961 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 APOBRQ0VD83 1088 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 PKN1Q16512 942 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 ZNF484Q5JVG2 852 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 BLOC1S2Q6QNY1 142 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 RTN4RL1Q86UN2 441 aaPredicted RBP13.04□□□□□ -0.32
SCFD1-206ENST00000484733 BANK1Q8NDB2 785 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.04□□□□□ -0.32
SCFD1-206ENST00000484733 NEK9Q8TD19 979 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 ATP8B4Q8TF62 1192 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 LINC01599Q8WXQ3 324 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 PLVAPQ9BX97 442 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 IGSF9BQ9UPX0 1349 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 FAM86B1E9PN63 330 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 EPB41L2O43491 1005 aaKnown RBP13.04□□□□□ -0.32
SCFD1-206ENST00000484733 NCK2O43639 380 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 FAM86B2P0C5J1 330 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 CD52P31358 61 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 EVCP57679 992 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 SETQ01105 290 aaPredicted RBP13.04□□□□□ -0.32
SCFD1-206ENST00000484733 JAKMIP3Q5VZ66 844 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 MIS18BP1Q6P0N0 1132 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 NPAS4Q8IUM7 802 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 PABPC5Q96DU9 382 aaKnown RBP13.04□□□□□ -0.32
SCFD1-206ENST00000484733 JAKMIP1Q96N16 626 aaKnown RBP13.04□□□□□ -0.32
SCFD1-206ENST00000484733 C11orf84Q9BUA3 381 aaPredicted RBP13.04□□□□□ -0.32
SCFD1-206ENST00000484733 FAM49AQ9H0Q0 323 aaPredicted RBP13.04□□□□□ -0.32
SCFD1-206ENST00000484733 TBC1D22BQ9NU19 505 aa13.04□□□□□ -0.32
SCFD1-206ENST00000484733 REV3LO60673 3130 aa13.03□□□□□ -0.32
SCFD1-206ENST00000484733 RPS6KB1P23443 525 aa13.03□□□□□ -0.32
SCFD1-206ENST00000484733 GNA11P29992 359 aa13.03□□□□□ -0.32
SCFD1-206ENST00000484733 CIITAP33076 1130 aa13.03□□□□□ -0.32
SCFD1-206ENST00000484733 CTNNB1P35222 781 aa13.03□□□□□ -0.32
SCFD1-206ENST00000484733 NAALADL2Q58DX5 795 aa13.03□□□□□ -0.32
SCFD1-206ENST00000484733 CMTR2Q8IYT2 770 aaKnown RBP13.03□□□□□ -0.32
SCFD1-206ENST00000484733 TRAPPC12Q8WVT3 735 aa13.03□□□□□ -0.32
SCFD1-206ENST00000484733 BRF1Q92994 677 aa13.03□□□□□ -0.32
SCFD1-206ENST00000484733 ZBTB10Q96DT7 871 aa13.03□□□□□ -0.32
SCFD1-206ENST00000484733 ZNF302Q9NR11 478 aa13.03□□□□□ -0.32
SCFD1-206ENST00000484733 PADI3Q9ULW8 664 aa13.03□□□□□ -0.32
SCFD1-206ENST00000484733 VCANP13611 3396 aa13.02□□□□□ -0.32
SCFD1-206ENST00000484733 IPO5O00410 1097 aaKnown RBP13.02□□□□□ -0.32
SCFD1-206ENST00000484733 STAG3L1P0CL83 205 aa13.02□□□□□ -0.32
SCFD1-206ENST00000484733 CPA1P15085 419 aa13.02□□□□□ -0.32
SCFD1-206ENST00000484733 KLRC1P26715 233 aa13.02□□□□□ -0.32
SCFD1-206ENST00000484733 PSMA5P28066 241 aa13.02□□□□□ -0.32
SCFD1-206ENST00000484733 KRT76Q01546 638 aa13.02□□□□□ -0.32
SCFD1-206ENST00000484733 NTRK3Q16288 839 aa13.02□□□□□ -0.32
SCFD1-206ENST00000484733 TCEAL5Q5H9L2 206 aa13.02□□□□□ -0.32
SCFD1-206ENST00000484733 ZNF746Q6NUN9 644 aaPredicted RBP13.02□□□□□ -0.32
SCFD1-206ENST00000484733 P2RX5Q93086 422 aa13.02□□□□□ -0.32
SCFD1-206ENST00000484733 GRXCR2A6NFK2 248 aa13.02□□□□□ -0.33
SCFD1-206ENST00000484733 PAK2Q13177 524 aa13.02□□□□□ -0.33
SCFD1-206ENST00000484733 BTG3Q14201 252 aaPredicted RBP13.02□□□□□ -0.33
SCFD1-206ENST00000484733 ODR4Q5SWX8 454 aa13.02□□□□□ -0.33
SCFD1-206ENST00000484733 CCDC60Q8IWA6 550 aaPredicted RBP13.02□□□□□ -0.33
SCFD1-206ENST00000484733 FAM178BQ8IXR5 827 aa13.02□□□□□ -0.33
SCFD1-206ENST00000484733 SMAP1Q8IYB5 467 aaPredicted RBP13.02□□□□□ -0.33
SCFD1-206ENST00000484733 REXO1Q8N1G1 1221 aaKnown RBP13.02□□□□□ -0.33
SCFD1-206ENST00000484733 BICD2Q8TD16 824 aa13.02□□□□□ -0.33
SCFD1-206ENST00000484733 RNF26Q9BY78 433 aaPredicted RBP13.02□□□□□ -0.33
SCFD1-206ENST00000484733 RNF216Q9NWF9 866 aaPredicted RBP13.02□□□□□ -0.33
SCFD1-206ENST00000484733 NAP1L2Q9ULW6 460 aaPredicted RBP13.02□□□□□ -0.33
SCFD1-206ENST00000484733 MAFBQ9Y5Q3 323 aaPredicted RBP13.02□□□□□ -0.33
SCFD1-206ENST00000484733 LOXHD1Q8IVV2 1947 aa13.02□□□□□ -0.33
SCFD1-206ENST00000484733 ATG2AQ2TAZ0 1938 aa13.01□□□□□ -0.33
SCFD1-206ENST00000484733 BACH1O14867 736 aa13.01□□□□□ -0.33
SCFD1-206ENST00000484733 ATP4AP20648 1035 aa13.01□□□□□ -0.33
SCFD1-206ENST00000484733 KCNA5P22460 613 aa13.01□□□□□ -0.33
SCFD1-206ENST00000484733 KIAA0319LQ8IZA0 1049 aa13.01□□□□□ -0.33
SCFD1-206ENST00000484733 ZNF577Q9BSK1 485 aa13.01□□□□□ -0.33
SCFD1-206ENST00000484733 ERVK-5Q9HDB9 667 aa13.01□□□□□ -0.33
SCFD1-206ENST00000484733 SH3GLB2Q9NR46 395 aa13.01□□□□□ -0.33
SCFD1-206ENST00000484733 DDX39AO00148 427 aaKnown RBP13.01□□□□□ -0.33
SCFD1-206ENST00000484733 ADAMTS3O15072 1205 aa13.01□□□□□ -0.33
SCFD1-206ENST00000484733 REC8O95072 547 aa13.01□□□□□ -0.33
SCFD1-206ENST00000484733 MMP1P03956 469 aa13.01□□□□□ -0.33
SCFD1-206ENST00000484733 IFNAR1P17181 557 aa13.01□□□□□ -0.33
SCFD1-206ENST00000484733 PTCRAQ6ISU1 281 aaPredicted RBP13.01□□□□□ -0.33
SCFD1-206ENST00000484733 SWSAP1Q6NVH7 229 aa13.01□□□□□ -0.33
SCFD1-206ENST00000484733 PDXDC2PQ6P474 469 aa13.01□□□□□ -0.33
SCFD1-206ENST00000484733 CCDC148Q8NFR7 591 aa13.01□□□□□ -0.33
SCFD1-206ENST00000484733 BBXQ8WY36 941 aaPredicted RBP13.01□□□□□ -0.33
SCFD1-206ENST00000484733 TMX1Q9H3N1 280 aa13.01□□□□□ -0.33
SCFD1-206ENST00000484733 EPHX3Q9H6B9 360 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms