RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 TOB2Q14106 344 aaPredicted RBP22.55■■□□□ 1.2
HPS4-213ENST00000483631 ERICH6BQ5W0A0 696 aa22.55■■□□□ 1.2
HPS4-213ENST00000483631 ZNF746Q6NUN9 644 aaPredicted RBP22.55■■□□□ 1.2
HPS4-213ENST00000483631 SMAP1Q8IYB5 467 aaPredicted RBP22.55■■□□□ 1.2
HPS4-213ENST00000483631 TRIM22Q8IYM9 498 aa22.55■■□□□ 1.2
HPS4-213ENST00000483631 ATP8B4Q8TF62 1192 aa22.55■■□□□ 1.2
HPS4-213ENST00000483631 YME1L1Q96TA2 773 aa22.55■■□□□ 1.2
HPS4-213ENST00000483631 SLC26A6Q9BXS9 759 aa22.55■■□□□ 1.2
HPS4-213ENST00000483631 CDY2AQ9Y6F7 541 aa22.55■■□□□ 1.2
HPS4-213ENST00000483631 NLRC5Q86WI3 1866 aa22.55■■□□□ 1.2
HPS4-213ENST00000483631 WDR81Q562E7 1941 aa22.55■■□□□ 1.2
HPS4-213ENST00000483631 KDM3AQ9Y4C1 1321 aa22.55■■□□□ 1.2
HPS4-213ENST00000483631 M0QZ92 97 aa22.54■■□□□ 1.2
HPS4-213ENST00000483631 IGBP1P78318 339 aa22.54■■□□□ 1.2
HPS4-213ENST00000483631 MIS18BP1Q6P0N0 1132 aa22.54■■□□□ 1.2
HPS4-213ENST00000483631 IL27Q8NEV9 243 aa22.54■■□□□ 1.2
HPS4-213ENST00000483631 GDPD5Q8WTR4 605 aa22.54■■□□□ 1.2
HPS4-213ENST00000483631 ZNF577Q9BSK1 485 aa22.54■■□□□ 1.2
HPS4-213ENST00000483631 FTHL17Q9BXU8 183 aa22.54■■□□□ 1.2
HPS4-213ENST00000483631 C22orf23Q9BZE7 217 aa22.54■■□□□ 1.2
HPS4-213ENST00000483631 BACH1O14867 736 aa22.53■■□□□ 1.2
HPS4-213ENST00000483631 USP11P51784 963 aa22.53■■□□□ 1.2
HPS4-213ENST00000483631 KRT76Q01546 638 aa22.53■■□□□ 1.2
HPS4-213ENST00000483631 SKIV2LQ15477 1246 aaKnown RBP22.53■■□□□ 1.2
HPS4-213ENST00000483631 FBXO22Q8NEZ5 403 aa22.53■■□□□ 1.2
HPS4-213ENST00000483631 ZNF302Q9NR11 478 aa22.53■■□□□ 1.2
HPS4-213ENST00000483631 TCEAL9Q9UHQ7 104 aa22.53■■□□□ 1.2
HPS4-213ENST00000483631 TRPV2Q9Y5S1 764 aa22.53■■□□□ 1.2
HPS4-213ENST00000483631 EVPLQ92817 2033 aa22.53■■□□□ 1.2
HPS4-213ENST00000483631 CCT2P78371 535 aaKnown RBP22.52■■□□□ 1.2
HPS4-213ENST00000483631 ZNF484Q5JVG2 852 aa22.52■■□□□ 1.2
HPS4-213ENST00000483631 KRT40Q6A162 431 aa22.52■■□□□ 1.2
HPS4-213ENST00000483631 CPLX2Q6PUV4 134 aaKnown RBP22.52■■□□□ 1.2
HPS4-213ENST00000483631 MTHFD1LQ6UB35 978 aa22.52■■□□□ 1.2
HPS4-213ENST00000483631 CCDC60Q8IWA6 550 aaPredicted RBP22.52■■□□□ 1.2
HPS4-213ENST00000483631 FAM49AQ9H0Q0 323 aaPredicted RBP22.52■■□□□ 1.2
HPS4-213ENST00000483631 MTUS1Q9ULD2 1270 aa22.52■■□□□ 1.2
HPS4-213ENST00000483631 IGSF9BQ9UPX0 1349 aa22.52■■□□□ 1.2
HPS4-213ENST00000483631 DDX39AO00148 427 aaKnown RBP22.51■■□□□ 1.19
HPS4-213ENST00000483631 TNFRSF10AO00220 468 aa22.51■■□□□ 1.19
HPS4-213ENST00000483631 ENPP3O14638 875 aa22.51■■□□□ 1.19
HPS4-213ENST00000483631 ADAMTS3O15072 1205 aa22.51■■□□□ 1.19
HPS4-213ENST00000483631 UPP2O95045 317 aa22.51■■□□□ 1.19
HPS4-213ENST00000483631 DEXIO95424 95 aa22.51■■□□□ 1.19
HPS4-213ENST00000483631 SSRP1Q08945 709 aaKnown RBP22.51■■□□□ 1.19
HPS4-213ENST00000483631 PDXDC2PQ6P474 469 aa22.51■■□□□ 1.19
HPS4-213ENST00000483631 ADAMTS19Q8TE59 1207 aa22.51■■□□□ 1.19
HPS4-213ENST00000483631 BBXQ8WY36 941 aaPredicted RBP22.51■■□□□ 1.19
HPS4-213ENST00000483631 HLA-CQ95604 372 aa22.51■■□□□ 1.19
HPS4-213ENST00000483631 IL17RAQ96F46 866 aa22.51■■□□□ 1.19
HPS4-213ENST00000483631 C17orf80Q9BSJ5 609 aa22.51■■□□□ 1.19
HPS4-213ENST00000483631 CELF4Q9BZC1 486 aaKnown RBP22.51■■□□□ 1.19
HPS4-213ENST00000483631 NCOA5Q9HCD5 579 aaKnown RBP22.51■■□□□ 1.19
HPS4-213ENST00000483631 VPS54Q9P1Q0 977 aa22.51■■□□□ 1.19
HPS4-213ENST00000483631 RWDD3Q9Y3V2 267 aa22.51■■□□□ 1.19
HPS4-213ENST00000483631 PCDHA10Q9Y5I2 948 aa22.51■■□□□ 1.19
HPS4-213ENST00000483631 MAFBQ9Y5Q3 323 aaPredicted RBP22.51■■□□□ 1.19
HPS4-213ENST00000483631 REV3LO60673 3130 aa22.51■■□□□ 1.19
HPS4-213ENST00000483631 CPLX1O14810 134 aa22.5■■□□□ 1.19
HPS4-213ENST00000483631 BMP1P13497 986 aa22.5■■□□□ 1.19
HPS4-213ENST00000483631 PTPROQ16827 1216 aa22.5■■□□□ 1.19
HPS4-213ENST00000483631 EPC2Q52LR7 807 aa22.5■■□□□ 1.19
HPS4-213ENST00000483631 PRR16Q569H4 304 aa22.5■■□□□ 1.19
HPS4-213ENST00000483631 GALNT17Q6IS24 598 aa22.5■■□□□ 1.19
HPS4-213ENST00000483631 LENG9Q96B70 501 aa22.5■■□□□ 1.19
HPS4-213ENST00000483631 RC3H2Q9HBD1 1191 aaKnown RBP22.5■■□□□ 1.19
HPS4-213ENST00000483631 H3BNC9 293 aa22.49■■□□□ 1.19
HPS4-213ENST00000483631 PSAPP07602 524 aa22.49■■□□□ 1.19
HPS4-213ENST00000483631 KLRC1P26715 233 aa22.49■■□□□ 1.19
HPS4-213ENST00000483631 NLRP5P59047 1200 aa22.49■■□□□ 1.19
HPS4-213ENST00000483631 SWSAP1Q6NVH7 229 aa22.49■■□□□ 1.19
HPS4-213ENST00000483631 TMEM192Q8IY95 271 aa22.49■■□□□ 1.19
HPS4-213ENST00000483631 RASGRP4Q8TDF6 673 aa22.49■■□□□ 1.19
HPS4-213ENST00000483631 TRAPPC12Q8WVT3 735 aa22.49■■□□□ 1.19
HPS4-213ENST00000483631 MRPL38Q96DV4 380 aaKnown RBP22.49■■□□□ 1.19
HPS4-213ENST00000483631 AGO3Q9H9G7 860 aaKnown RBP22.49■■□□□ 1.19
HPS4-213ENST00000483631 PPP4R2Q9NY27 417 aa22.49■■□□□ 1.19
HPS4-213ENST00000483631 CEP131Q9UPN4 1083 aa22.49■■□□□ 1.19
HPS4-213ENST00000483631 TCF20Q9UGU0 1960 aaKnown RBP22.49■■□□□ 1.19
HPS4-213ENST00000483631 C5orf67F2Z3F1 127 aa22.48■■□□□ 1.19
HPS4-213ENST00000483631 RB1P06400 928 aa22.48■■□□□ 1.19
HPS4-213ENST00000483631 CD52P31358 61 aa22.48■■□□□ 1.19
HPS4-213ENST00000483631 ODR4Q5SWX8 454 aa22.48■■□□□ 1.19
HPS4-213ENST00000483631 FIBCD1Q8N539 461 aa22.48■■□□□ 1.19
HPS4-213ENST00000483631 DAGLBQ8NCG7 672 aa22.48■■□□□ 1.19
HPS4-213ENST00000483631 FAM167AQ96KS9 214 aa22.48■■□□□ 1.19
HPS4-213ENST00000483631 UHRF1Q96T88 793 aaPredicted RBP22.48■■□□□ 1.19
HPS4-213ENST00000483631 RIT2Q99578 217 aa22.48■■□□□ 1.19
HPS4-213ENST00000483631 PDRG1Q9NUG6 133 aa22.48■■□□□ 1.19
HPS4-213ENST00000483631 PCDHA4Q9UN74 947 aa22.48■■□□□ 1.19
HPS4-213ENST00000483631 BDP1A6H8Y1 2624 aa22.48■■□□□ 1.19
HPS4-213ENST00000483631 ADGRA3Q8IWK6 1321 aa22.48■■□□□ 1.19
HPS4-213ENST00000483631 WDR64B1ANS9 1081 aa22.47■■□□□ 1.19
HPS4-213ENST00000483631 ZBTB42B2RXF5 422 aa22.47■■□□□ 1.19
HPS4-213ENST00000483631 ATP4AP20648 1035 aa22.47■■□□□ 1.19
HPS4-213ENST00000483631 ANAPC15P60006 121 aa22.47■■□□□ 1.19
HPS4-213ENST00000483631 TFF2Q03403 129 aa22.47■■□□□ 1.19
HPS4-213ENST00000483631 PAK2Q13177 524 aa22.47■■□□□ 1.19
HPS4-213ENST00000483631 TIGD5Q53EQ6 642 aa22.47■■□□□ 1.19
HPS4-213ENST00000483631 ZNF710Q8N1W2 664 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms