RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 RPUSD2Q8IZ73 545 aaKnown RBP17.55■□□□□ 0.4
RPP40-206ENST00000483546 DHX38Q92620 1227 aaKnown RBP17.55■□□□□ 0.4
RPP40-206ENST00000483546 WNT8AQ9H1J5 351 aa17.55■□□□□ 0.4
RPP40-206ENST00000483546 COLQQ9Y215 455 aaPredicted RBP17.55■□□□□ 0.4
RPP40-206ENST00000483546 VPS37CA5D8V6 355 aaPredicted RBP17.54■□□□□ 0.4
RPP40-206ENST00000483546 OATP04181 439 aa17.54■□□□□ 0.4
RPP40-206ENST00000483546 P4HBP07237 508 aaKnown RBP17.54■□□□□ 0.4
RPP40-206ENST00000483546 IQCF3P0C7M6 154 aa17.54■□□□□ 0.4
RPP40-206ENST00000483546 CKBP12277 381 aa17.54■□□□□ 0.4
RPP40-206ENST00000483546 ATP4AP20648 1035 aa17.54■□□□□ 0.4
RPP40-206ENST00000483546 TXKP42681 527 aa17.54■□□□□ 0.4
RPP40-206ENST00000483546 QARSP47897 775 aaKnown RBP17.54■□□□□ 0.4
RPP40-206ENST00000483546 TOB1P50616 345 aaPredicted RBP17.54■□□□□ 0.4
RPP40-206ENST00000483546 PSMC5P62195 406 aa17.54■□□□□ 0.4
RPP40-206ENST00000483546 ZNF200P98182 395 aaPredicted RBP17.54■□□□□ 0.4
RPP40-206ENST00000483546 ZNF174Q15697 407 aa17.54■□□□□ 0.4
RPP40-206ENST00000483546 TRIM71Q2Q1W2 868 aaKnown RBP17.54■□□□□ 0.4
RPP40-206ENST00000483546 PSRC1Q6PGN9 363 aaPredicted RBP17.54■□□□□ 0.4
RPP40-206ENST00000483546 LRRC8DQ7L1W4 858 aa17.54■□□□□ 0.4
RPP40-206ENST00000483546 TDHQ8IZJ6 230 aa17.54■□□□□ 0.4
RPP40-206ENST00000483546 TMEM60Q9H2L4 133 aa17.54■□□□□ 0.4
RPP40-206ENST00000483546 IL23AQ9NPF7 189 aa17.54■□□□□ 0.4
RPP40-206ENST00000483546 UMODL1Q5DID0 1318 aa17.53■□□□□ 0.4
RPP40-206ENST00000483546 EML1O00423 815 aa17.53■□□□□ 0.4
RPP40-206ENST00000483546 CSF2RAP15509 400 aa17.53■□□□□ 0.4
RPP40-206ENST00000483546 PRPHP41219 470 aa17.53■□□□□ 0.4
RPP40-206ENST00000483546 PRKCEQ02156 737 aa17.53■□□□□ 0.4
RPP40-206ENST00000483546 TMEM266Q2M3C6 531 aa17.53■□□□□ 0.4
RPP40-206ENST00000483546 XKR3Q5GH77 459 aa17.53■□□□□ 0.4
RPP40-206ENST00000483546 MARCH8Q5T0T0 291 aa17.53■□□□□ 0.4
RPP40-206ENST00000483546 RAB34Q9BZG1 259 aa17.53■□□□□ 0.4
RPP40-206ENST00000483546 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.53■□□□□ 0.4
RPP40-206ENST00000483546 PPME1Q9Y570 386 aa17.53■□□□□ 0.4
RPP40-206ENST00000483546 PCDHA2Q9Y5H9 948 aa17.53■□□□□ 0.4
RPP40-206ENST00000483546 SCN5AQ14524 2016 aa17.52■□□□□ 0.4
RPP40-206ENST00000483546 EVPLQ92817 2033 aa17.52■□□□□ 0.4
RPP40-206ENST00000483546 SMIM35A0A1B0GVV1 85 aa17.52■□□□□ 0.4
RPP40-206ENST00000483546 MAGEB2O15479 319 aa17.52■□□□□ 0.4
RPP40-206ENST00000483546 ZNF862O60290 1169 aa17.52■□□□□ 0.4
RPP40-206ENST00000483546 BMP15O95972 392 aa17.52■□□□□ 0.4
RPP40-206ENST00000483546 THPOP40225 353 aa17.52■□□□□ 0.4
RPP40-206ENST00000483546 CCL23P55773 120 aa17.52■□□□□ 0.4
RPP40-206ENST00000483546 IGBP1P78318 339 aa17.52■□□□□ 0.4
RPP40-206ENST00000483546 NCAPH2Q6IBW4 605 aa17.52■□□□□ 0.4
RPP40-206ENST00000483546 C4orf19Q8IY42 314 aa17.52■□□□□ 0.4
RPP40-206ENST00000483546 NIFKQ9BYG3 293 aaKnown RBP17.52■□□□□ 0.4
RPP40-206ENST00000483546 PCDHB6Q9Y5E3 794 aa17.52■□□□□ 0.4
RPP40-206ENST00000483546 STK24Q9Y6E0 443 aa17.52■□□□□ 0.4
RPP40-206ENST00000483546 STX6O43752 255 aa17.51■□□□□ 0.39
RPP40-206ENST00000483546 FXR2P51116 673 aaKnown RBP eCLIP17.51■□□□□ 0.39
RPP40-206ENST00000483546 PTGDRQ13258 359 aa17.51■□□□□ 0.39
RPP40-206ENST00000483546 BECN1Q14457 450 aa17.51■□□□□ 0.39
RPP40-206ENST00000483546 UGCGQ16739 394 aa17.51■□□□□ 0.39
RPP40-206ENST00000483546 FAM26DQ5JW98 314 aa17.51■□□□□ 0.39
RPP40-206ENST00000483546 MTHFD1LQ6UB35 978 aa17.51■□□□□ 0.39
RPP40-206ENST00000483546 ZNF710Q8N1W2 664 aa17.51■□□□□ 0.39
RPP40-206ENST00000483546 NME8Q8N427 588 aa17.51■□□□□ 0.39
RPP40-206ENST00000483546 C4orf32Q8N8J7 132 aa17.51■□□□□ 0.39
RPP40-206ENST00000483546 ERMNQ8TAM6 284 aa17.51■□□□□ 0.39
RPP40-206ENST00000483546 MTIF3Q9H2K0 278 aaKnown RBP17.51■□□□□ 0.39
RPP40-206ENST00000483546 ZSCAN16Q9H4T2 348 aaPredicted RBP17.51■□□□□ 0.39
RPP40-206ENST00000483546 ZSWIM4Q9H7M6 989 aa17.51■□□□□ 0.39
RPP40-206ENST00000483546 RSPH10B2B2RC85 870 aa17.5■□□□□ 0.39
RPP40-206ENST00000483546 ZBTB42B2RXF5 422 aa17.5■□□□□ 0.39
RPP40-206ENST00000483546 LYPLA2O95372 231 aa17.5■□□□□ 0.39
RPP40-206ENST00000483546 RSPH10BP0C881 870 aa17.5■□□□□ 0.39
RPP40-206ENST00000483546 KLRC1P26715 233 aa17.5■□□□□ 0.39
RPP40-206ENST00000483546 PDIA5Q14554 519 aa17.5■□□□□ 0.39
RPP40-206ENST00000483546 ZNF618Q5T7W0 954 aa17.5■□□□□ 0.39
RPP40-206ENST00000483546 ARL6IP4Q66PJ3 421 aaKnown RBP17.5■□□□□ 0.39
RPP40-206ENST00000483546 FAM43BQ6ZT52 329 aaPredicted RBP17.5■□□□□ 0.39
RPP40-206ENST00000483546 EXOC8Q8IYI6 725 aa17.5■□□□□ 0.39
RPP40-206ENST00000483546 BANK1Q8NDB2 785 aa17.5■□□□□ 0.39
RPP40-206ENST00000483546 WNT8BQ93098 351 aa17.5■□□□□ 0.39
RPP40-206ENST00000483546 SCLYQ96I15 445 aa17.5■□□□□ 0.39
RPP40-206ENST00000483546 HSD17B14Q9BPX1 270 aa17.5■□□□□ 0.39
RPP40-206ENST00000483546 EIF2AK1Q9BQI3 630 aaKnown RBP17.5■□□□□ 0.39
RPP40-206ENST00000483546 LXNQ9BS40 222 aa17.5■□□□□ 0.39
RPP40-206ENST00000483546 FOXD4L1Q9NU39 408 aa17.5■□□□□ 0.39
RPP40-206ENST00000483546 MTMR6Q9Y217 621 aa17.5■□□□□ 0.39
RPP40-206ENST00000483546 TRIOBPQ9H2D6 2365 aa17.5■□□□□ 0.39
RPP40-206ENST00000483546 LOXHD1Q8IVV2 1947 aa17.49■□□□□ 0.39
RPP40-206ENST00000483546 C22orf31O95567 290 aa17.49■□□□□ 0.39
RPP40-206ENST00000483546 FGBP02675 491 aa17.49■□□□□ 0.39
RPP40-206ENST00000483546 CXCL10P02778 98 aa17.49■□□□□ 0.39
RPP40-206ENST00000483546 ACTN1P12814 892 aa17.49■□□□□ 0.39
RPP40-206ENST00000483546 MUTP22033 750 aa17.49■□□□□ 0.39
RPP40-206ENST00000483546 ATP2C1P98194 919 aaPredicted RBP17.49■□□□□ 0.39
RPP40-206ENST00000483546 NBR1Q14596 966 aa17.49■□□□□ 0.39
RPP40-206ENST00000483546 TARBP2Q15633 366 aaKnown RBP17.49■□□□□ 0.39
RPP40-206ENST00000483546 IER5Q5VY09 327 aa17.49■□□□□ 0.39
RPP40-206ENST00000483546 HAUS3Q68CZ6 603 aa17.49■□□□□ 0.39
RPP40-206ENST00000483546 TRAF7Q6Q0C0 670 aa17.49■□□□□ 0.39
RPP40-206ENST00000483546 OTUD6AQ7L8S5 288 aa17.49■□□□□ 0.39
RPP40-206ENST00000483546 TRAPPC12Q8WVT3 735 aa17.49■□□□□ 0.39
RPP40-206ENST00000483546 JPH2Q9BR39 696 aaPredicted RBP17.49■□□□□ 0.39
RPP40-206ENST00000483546 TUFT1Q9NNX1 390 aa17.49■□□□□ 0.39
RPP40-206ENST00000483546 SEPT9Q9UHD8 586 aaPredicted RBP17.49■□□□□ 0.39
RPP40-206ENST00000483546 ARID2Q68CP9 1835 aa17.49■□□□□ 0.39
RPP40-206ENST00000483546 MYH15Q9Y2K3 1946 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms