RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 BEND6Q5SZJ8 279 aaPredicted RBP9.98□□□□□ -0.81
CALD1-220ENST00000482470 ZNF746Q6NUN9 644 aaPredicted RBP9.98□□□□□ -0.81
CALD1-220ENST00000482470 DPH6Q7L8W6 267 aa9.98□□□□□ -0.81
CALD1-220ENST00000482470 NLRX1Q86UT6 975 aa9.98□□□□□ -0.81
CALD1-220ENST00000482470 MICALL1Q8N3F8 863 aa9.98□□□□□ -0.81
CALD1-220ENST00000482470 FAM20AQ96MK3 541 aa9.98□□□□□ -0.81
CALD1-220ENST00000482470 CEP63Q96MT8 703 aa9.98□□□□□ -0.81
CALD1-220ENST00000482470 MED4Q9NPJ6 270 aa9.98□□□□□ -0.81
CALD1-220ENST00000482470 NYAP2Q9P242 653 aa9.98□□□□□ -0.81
CALD1-220ENST00000482470 A0A087X0T9 212 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 H3BQF6 201 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 PSMD14O00487 310 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 FAM228BP0C875 321 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 SMARCA1P28370 1054 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 GCLMP48507 274 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 VPS41P49754 854 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 MYL7Q01449 175 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 GLYCTKQ8IVS8 523 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 BCAS4Q8TDM0 211 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 HAS1Q92839 578 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 FAM163AQ96GL9 167 aaPredicted RBP9.97□□□□□ -0.81
CALD1-220ENST00000482470 MTMR9Q96QG7 549 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 FNBP1Q96RU3 617 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 SELENOSQ9BQE4 189 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 PACSIN1Q9BY11 444 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 DNAJC12Q9UKB3 198 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 BAZ2AQ9UIF9 1905 aaKnown RBP9.97□□□□□ -0.81
CALD1-220ENST00000482470 ANO9A1A5B4 782 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 IPO5O00410 1097 aaKnown RBP9.97□□□□□ -0.81
CALD1-220ENST00000482470 MSH4O15457 936 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 PEX3P56589 373 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 ORC2Q13416 577 aaPredicted RBP9.97□□□□□ -0.81
CALD1-220ENST00000482470 SCFD1Q8WVM8 642 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 STIM2Q9P246 746 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 CHORDC1Q9UHD1 332 aaPredicted RBP9.97□□□□□ -0.81
CALD1-220ENST00000482470 REXO2Q9Y3B8 237 aaKnown RBP9.97□□□□□ -0.81
CALD1-220ENST00000482470 PPP1R11O60927 126 aaPredicted RBP9.97□□□□□ -0.81
CALD1-220ENST00000482470 ZBED4O75132 1171 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 POTEJP0CG39 1038 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 TTLL6Q8N841 843 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 ZNF507Q8TCN5 953 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 RUSC1Q9BVN2 902 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 FGFBP2Q9BYJ0 223 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 PPANQ9NQ55 473 aaKnown RBP9.97□□□□□ -0.81
CALD1-220ENST00000482470 PICK1Q9NRD5 415 aa9.97□□□□□ -0.81
CALD1-220ENST00000482470 DMGDHQ9UI17 866 aaKnown RBP9.97□□□□□ -0.81
CALD1-220ENST00000482470 UTP11Q9Y3A2 253 aaKnown RBP9.97□□□□□ -0.81
CALD1-220ENST00000482470 NKRFO15226 690 aaKnown RBP eCLIP9.96□□□□□ -0.81
CALD1-220ENST00000482470 UCHL3P15374 230 aa9.96□□□□□ -0.81
CALD1-220ENST00000482470 TNNI1P19237 187 aa9.96□□□□□ -0.81
CALD1-220ENST00000482470 CTNNA1P35221 906 aaKnown RBP9.96□□□□□ -0.81
CALD1-220ENST00000482470 ACTN2P35609 894 aa9.96□□□□□ -0.81
CALD1-220ENST00000482470 KCNA1Q09470 495 aa9.96□□□□□ -0.81
CALD1-220ENST00000482470 PPFIA1Q13136 1202 aa9.96□□□□□ -0.81
CALD1-220ENST00000482470 ZNF211Q13398 564 aaPredicted RBP9.96□□□□□ -0.81
CALD1-220ENST00000482470 PPP1R7Q15435 360 aa9.96□□□□□ -0.81
CALD1-220ENST00000482470 PRAMEF18Q5VWM3 479 aa9.96□□□□□ -0.81
CALD1-220ENST00000482470 TRAPPC11Q7Z392 1133 aa9.96□□□□□ -0.81
CALD1-220ENST00000482470 LDHDQ86WU2 507 aa9.96□□□□□ -0.81
CALD1-220ENST00000482470 SCLT1Q96NL6 688 aa9.96□□□□□ -0.81
CALD1-220ENST00000482470 LXNQ9BS40 222 aa9.96□□□□□ -0.81
CALD1-220ENST00000482470 DDX47Q9H0S4 455 aaKnown RBP9.96□□□□□ -0.81
CALD1-220ENST00000482470 RBM12Q9NTZ6 932 aaKnown RBP9.96□□□□□ -0.81
CALD1-220ENST00000482470 USTQ9Y2C2 406 aa9.96□□□□□ -0.81
CALD1-220ENST00000482470 ATF5Q9Y2D1 282 aaPredicted RBP9.96□□□□□ -0.81
CALD1-220ENST00000482470 LRRIQ3A6PVS8 624 aaPredicted RBP9.96□□□□□ -0.82
CALD1-220ENST00000482470 FAM86B1E9PN63 330 aa9.96□□□□□ -0.82
CALD1-220ENST00000482470 FAM86B2P0C5J1 330 aa9.96□□□□□ -0.82
CALD1-220ENST00000482470 CCT5P48643 541 aa9.96□□□□□ -0.82
CALD1-220ENST00000482470 GTF2A1P52655 376 aaPredicted RBP9.96□□□□□ -0.82
CALD1-220ENST00000482470 KRT71Q3SY84 523 aa9.96□□□□□ -0.82
CALD1-220ENST00000482470 MCTP2Q6DN12 878 aa9.96□□□□□ -0.82
CALD1-220ENST00000482470 EXOC4Q96A65 974 aa9.96□□□□□ -0.82
CALD1-220ENST00000482470 WDR11Q9BZH6 1224 aa9.96□□□□□ -0.82
CALD1-220ENST00000482470 STK24Q9Y6E0 443 aa9.96□□□□□ -0.82
CALD1-220ENST00000482470 PTK2Q05397 1052 aa9.96□□□□□ -0.82
CALD1-220ENST00000482470 CEP55Q53EZ4 464 aa9.96□□□□□ -0.82
CALD1-220ENST00000482470 PADI6Q6TGC4 694 aa9.96□□□□□ -0.82
CALD1-220ENST00000482470 CCDC105Q8IYK2 499 aa9.96□□□□□ -0.82
CALD1-220ENST00000482470 HDAC7Q8WUI4 952 aa9.96□□□□□ -0.82
CALD1-220ENST00000482470 AGBL1Q96MI9 1066 aa9.96□□□□□ -0.82
CALD1-220ENST00000482470 TYW1Q9NV66 732 aaKnown RBP9.96□□□□□ -0.82
CALD1-220ENST00000482470 GAKO14976 1311 aa9.96□□□□□ -0.82
CALD1-220ENST00000482470 SPATA31A6Q5VVP1 1343 aa9.96□□□□□ -0.82
CALD1-220ENST00000482470 GAP43P17677 238 aa9.95□□□□□ -0.82
CALD1-220ENST00000482470 RPA1P27694 616 aa9.95□□□□□ -0.82
CALD1-220ENST00000482470 CASP5P51878 434 aa9.95□□□□□ -0.82
CALD1-220ENST00000482470 MKRN4PQ13434 485 aaPredicted RBP9.95□□□□□ -0.82
CALD1-220ENST00000482470 DRAP1Q14919 205 aaPredicted RBP9.95□□□□□ -0.82
CALD1-220ENST00000482470 MIIPQ5JXC2 388 aa9.95□□□□□ -0.82
CALD1-220ENST00000482470 LRRC15Q8TF66 581 aa9.95□□□□□ -0.82
CALD1-220ENST00000482470 POMGNT1Q8WZA1 660 aa9.95□□□□□ -0.82
CALD1-220ENST00000482470 MTMR8Q96EF0 704 aa9.95□□□□□ -0.82
CALD1-220ENST00000482470 CCDC114Q96M63 670 aa9.95□□□□□ -0.82
CALD1-220ENST00000482470 ZDHHC15Q96MV8 337 aa9.95□□□□□ -0.82
CALD1-220ENST00000482470 TAOK3Q9H2K8 898 aa9.95□□□□□ -0.82
CALD1-220ENST00000482470 IKZF4Q9H2S9 585 aa9.95□□□□□ -0.82
CALD1-220ENST00000482470 L1RE1Q9UN81 338 aa9.95□□□□□ -0.82
CALD1-220ENST00000482470 PDE2AO00408 941 aaPredicted RBP9.95□□□□□ -0.82
CALD1-220ENST00000482470 SLC16A4O15374 487 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms