RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 EVPLQ92817 2033 aa13.2□□□□□ -0.3
GARNL3-217ENST00000481875 DGKIO75912 1065 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 UPP2O95045 317 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 EXOSC10Q01780 885 aaKnown RBP13.19□□□□□ -0.3
GARNL3-217ENST00000481875 NAALADL2Q58DX5 795 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 IER5Q5VY09 327 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 PTCRAQ6ISU1 281 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-217ENST00000481875 PPP1R18Q6NYC8 613 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 DHX32Q7L7V1 743 aaKnown RBP13.19□□□□□ -0.3
GARNL3-217ENST00000481875 NIPA1Q7RTP0 329 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 NME8Q8N427 588 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 GLG1Q92896 1179 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 KHSRPQ92945 711 aaKnown RBP eCLIP13.19□□□□□ -0.3
GARNL3-217ENST00000481875 P2RX5Q93086 422 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 TBC1D32Q96NH3 1257 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 MXRA8Q9BRK3 442 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 TM6SF1Q9BZW5 370 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 RIC8AQ9NPQ8 531 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 RBM28Q9NW13 759 aaKnown RBP13.19□□□□□ -0.3
GARNL3-217ENST00000481875 SLC9A2Q9UBY0 812 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 FAM50BQ9Y247 325 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 PCDHA2Q9Y5H9 948 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 CYP46A1Q9Y6A2 500 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 WDR81Q562E7 1941 aa13.19□□□□□ -0.3
GARNL3-217ENST00000481875 WDFY4Q6ZS81 3184 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 ADGRA3Q8IWK6 1321 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 IGKV6D-21A0A0A0MT36 114 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 POTEB3A0JP26 581 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 MEIS1O00470 390 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 GHRP10912 638 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 ALADP13716 330 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 INSRRP14616 1297 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 MRPS6P82932 125 aaKnown RBP13.18□□□□□ -0.3
GARNL3-217ENST00000481875 FGD1P98174 961 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 CEP55Q53EZ4 464 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 APOA5Q6Q788 366 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 POTEBQ6S5H4 581 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 CMTR1Q8N1G2 835 aaKnown RBP13.18□□□□□ -0.3
GARNL3-217ENST00000481875 DNAJB3Q8WWF6 145 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 FAM122AQ96E09 287 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 ZSWIM6Q9HCJ5 1215 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 RAPGEFL1Q9UHV5 662 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 ZNF318Q5VUA4 2279 aa13.18□□□□□ -0.3
GARNL3-217ENST00000481875 IGSF9BQ9UPX0 1349 aa13.17□□□□□ -0.3
GARNL3-217ENST00000481875 SMIM35A0A1B0GVV1 85 aa13.17□□□□□ -0.3
GARNL3-217ENST00000481875 PRR33A8MZF0 331 aa13.17□□□□□ -0.3
GARNL3-217ENST00000481875 CPA1P15085 419 aa13.17□□□□□ -0.3
GARNL3-217ENST00000481875 LTBRP36941 435 aa13.17□□□□□ -0.3
GARNL3-217ENST00000481875 SREBF1P36956 1147 aa13.17□□□□□ -0.3
GARNL3-217ENST00000481875 CLK2P49760 499 aaKnown RBP13.17□□□□□ -0.3
GARNL3-217ENST00000481875 SP4Q02446 784 aa13.17□□□□□ -0.3
GARNL3-217ENST00000481875 AP3B2Q13367 1082 aa13.17□□□□□ -0.3
GARNL3-217ENST00000481875 UBE2SQ16763 222 aa13.17□□□□□ -0.3
GARNL3-217ENST00000481875 TCEAL5Q5H9L2 206 aa13.17□□□□□ -0.3
GARNL3-217ENST00000481875 RUFY3Q7L099 469 aa13.17□□□□□ -0.3
GARNL3-217ENST00000481875 RTN4RL1Q86UN2 441 aaPredicted RBP13.17□□□□□ -0.3
GARNL3-217ENST00000481875 CRYGNQ8WXF5 182 aa13.17□□□□□ -0.3
GARNL3-217ENST00000481875 AZI2Q9H6S1 392 aa13.17□□□□□ -0.3
GARNL3-217ENST00000481875 AGO3Q9H9G7 860 aaKnown RBP13.17□□□□□ -0.3
GARNL3-217ENST00000481875 HCN4Q9Y3Q4 1203 aa13.17□□□□□ -0.3
GARNL3-217ENST00000481875 CDY2AQ9Y6F7 541 aa13.17□□□□□ -0.3
GARNL3-217ENST00000481875 CNTNAP5Q8WYK1 1306 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 KIAA1671Q9BY89 1806 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 MMP1P03956 469 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 IL9P15248 144 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 RXRAP19793 462 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 RPS6KB1P23443 525 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 STAT5BP51692 787 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 ACTR2P61160 394 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 PLCB4Q15147 1175 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 WWC2Q6AWC2 1192 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 TYW1BQ6NUM6 668 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 HEATR3Q7Z4Q2 680 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 CMTR2Q8IYT2 770 aaKnown RBP13.16□□□□□ -0.3
GARNL3-217ENST00000481875 CYP2W1Q8TAV3 490 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 TCEANC2Q96MN5 208 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 SDF4Q9BRK5 362 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 LRRC2Q9BYS8 371 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 UPF3BQ9BZI7 483 aaKnown RBP13.16□□□□□ -0.3
GARNL3-217ENST00000481875 PDRG1Q9NUG6 133 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 BARHL2Q9NY43 387 aa13.16□□□□□ -0.3
GARNL3-217ENST00000481875 FNDC1Q4ZHG4 1894 aaPredicted RBP13.16□□□□□ -0.3
GARNL3-217ENST00000481875 RBAK-RBAKDNI3L0D1 243 aa13.15□□□□□ -0.3
GARNL3-217ENST00000481875 GRM6O15303 877 aa13.15□□□□□ -0.3
GARNL3-217ENST00000481875 CYP3A4P08684 503 aa13.15□□□□□ -0.3
GARNL3-217ENST00000481875 MARK3P27448 753 aa13.15□□□□□ -0.3
GARNL3-217ENST00000481875 CTNNB1P35222 781 aa13.15□□□□□ -0.3
GARNL3-217ENST00000481875 NEK4P51957 841 aa13.15□□□□□ -0.3
GARNL3-217ENST00000481875 ZP2Q05996 745 aa13.15□□□□□ -0.3
GARNL3-217ENST00000481875 CAMK1Q14012 370 aa13.15□□□□□ -0.3
GARNL3-217ENST00000481875 SMAD2Q15796 467 aaKnown RBP13.15□□□□□ -0.3
GARNL3-217ENST00000481875 MCTP2Q6DN12 878 aa13.15□□□□□ -0.3
GARNL3-217ENST00000481875 ABHD15Q6UXT9 468 aa13.15□□□□□ -0.3
GARNL3-217ENST00000481875 MICU3Q86XE3 530 aa13.15□□□□□ -0.3
GARNL3-217ENST00000481875 NPAS4Q8IUM7 802 aa13.15□□□□□ -0.3
GARNL3-217ENST00000481875 ADHFE1Q8IWW8 467 aa13.15□□□□□ -0.3
GARNL3-217ENST00000481875 FBXL16Q8N461 479 aa13.15□□□□□ -0.3
GARNL3-217ENST00000481875 LINC01599Q8WXQ3 324 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms