RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 MYH9P35579 1960 aaKnown RBP11.33□□□□□ -0.6
USP39-215ENST00000481409 GSTTP1A0A1W2PQM5 241 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 BACH1O14867 736 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 GAS2O43903 313 aaKnown RBP11.32□□□□□ -0.6
USP39-215ENST00000481409 DUSP11O75319 330 aaKnown RBP11.32□□□□□ -0.6
USP39-215ENST00000481409 RHOBTB3O94955 611 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 ATXN8OSP0DMR3 200 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 CYBAP13498 195 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 SCP2P22307 547 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 GUCY2CP25092 1073 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 YWHABP31946 246 aaKnown RBP11.32□□□□□ -0.6
USP39-215ENST00000481409 ABCD1P33897 745 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 TCF7P36402 384 aaPredicted RBP11.32□□□□□ -0.6
USP39-215ENST00000481409 ADCYAP1R1P41586 468 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 AFMP43652 599 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 CPT1AP50416 773 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 STAT5BP51692 787 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 ARHGAP1Q07960 439 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 CTTNQ14247 550 aaKnown RBP11.32□□□□□ -0.6
USP39-215ENST00000481409 MCM6Q14566 821 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 ECM1Q16610 540 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 DGKDQ16760 1214 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 COBLL1Q53SF7 1204 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 SWSAP1Q6NVH7 229 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 UNC13DQ70J99 1090 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 CCDC65Q8IXS2 484 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 MLKLQ8NB16 471 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 SLC17A8Q8NDX2 589 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 RAET1EQ8TD07 263 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 BBXQ8WY36 941 aaPredicted RBP11.32□□□□□ -0.6
USP39-215ENST00000481409 CCDC43Q96MW1 224 aaKnown RBP11.32□□□□□ -0.6
USP39-215ENST00000481409 MTRQ99707 1265 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 FUCA2Q9BTY2 467 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 NIFKQ9BYG3 293 aaKnown RBP11.32□□□□□ -0.6
USP39-215ENST00000481409 SPC25Q9HBM1 224 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 PDGFCQ9NRA1 345 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 GABBR1Q9UBS5 961 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 SEL1LQ9UBV2 794 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 ZNF215Q9UL58 517 aaPredicted RBP11.32□□□□□ -0.6
USP39-215ENST00000481409 GABRQQ9UN88 632 aa11.32□□□□□ -0.6
USP39-215ENST00000481409 ARHGEF35A5YM69 484 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 A6NJR5 290 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 E9PMD0 336 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 SEPT4O43236 478 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 ADCY3O60266 1144 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 DGAT1O75907 488 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 KIF20AO95235 890 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 OATP04181 439 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 RPN1P04843 607 aaKnown RBP11.31□□□□□ -0.6
USP39-215ENST00000481409 SMPD1P17405 629 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 GAP43P17677 238 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 CYP11B2P19099 503 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 CYP2C19P33261 490 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 RARRES1P49788 294 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 NLRP12P59046 1061 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 TYRO3Q06418 890 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 PNOCQ13519 176 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 CCL14Q16627 93 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 HSDL1Q3SXM5 330 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 KCNK18Q7Z418 384 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 CCDC60Q8IWA6 550 aaPredicted RBP11.31□□□□□ -0.6
USP39-215ENST00000481409 CKAP2LQ8IYA6 745 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 DNAJC5GQ8N7S2 189 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 BANK1Q8NDB2 785 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 OR6J1Q8NGC5 347 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 TRIB2Q92519 343 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 DDX12PQ92771 950 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 PLIN2Q99541 437 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 JPH2Q9BR39 696 aaPredicted RBP11.31□□□□□ -0.6
USP39-215ENST00000481409 AP5M1Q9H0R1 490 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 GZF1Q9H116 711 aaPredicted RBP11.31□□□□□ -0.6
USP39-215ENST00000481409 BHMT2Q9H2M3 363 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 TSPY26PQ9H489 355 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 C17orf75Q9HAS0 396 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 ERAP1Q9NZ08 941 aa11.31□□□□□ -0.6
USP39-215ENST00000481409 DOCK5Q9H7D0 1870 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 FRMD3A2A2Y4 597 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 MYMKA6NI61 221 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 HAX1O00165 279 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 ZEB2O60315 1214 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 HBP1O60381 514 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 MAPTP10636 758 aaKnown RBP11.3□□□□□ -0.6
USP39-215ENST00000481409 RFC5P40937 340 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 ASIC1P78348 528 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 PRKCEQ02156 737 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 CUL4BQ13620 913 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 MORC3Q14149 939 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 MAP3K21Q5TCX8 1036 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 ZNF658Q5TYW1 1059 aaPredicted RBP11.3□□□□□ -0.6
USP39-215ENST00000481409 RINT1Q6NUQ1 792 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 C1orf186Q6ZWK4 172 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 TLK2Q86UE8 772 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 GPBP1Q86WP2 473 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 MCPH1Q8NEM0 835 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 UIMC1Q96RL1 719 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 BPIFA3Q9BQP9 254 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 KATNAL1Q9BW62 490 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 EXOC1Q9NV70 894 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 COL4A3BPQ9Y5P4 624 aa11.3□□□□□ -0.6
USP39-215ENST00000481409 COL1A2P08123 1366 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms