RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 MED14OSP0DP75 135 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 PTX3P26022 381 aaPredicted RBP4.63□□□□□ -1.67
UBE2F-221ENST00000480828 SERPINB3P29508 390 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 RAP1GAPP47736 663 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 PCBP3P57721 371 aaKnown RBP4.63□□□□□ -1.67
UBE2F-221ENST00000480828 RPL11P62913 178 aaKnown RBP4.63□□□□□ -1.67
UBE2F-221ENST00000480828 RBM10P98175 930 aaKnown RBP4.63□□□□□ -1.67
UBE2F-221ENST00000480828 TEKQ02763 1124 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 EGR3Q06889 387 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 ARHGAP44Q17R89 818 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 KRTAP19-4Q3LI73 84 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 RGL3Q3MIN7 710 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 LONRF3Q496Y0 759 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 IFIT1BQ5T764 474 aaKnown RBP4.63□□□□□ -1.67
UBE2F-221ENST00000480828 CPZQ66K79 652 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 CYB5RLQ6IPT4 315 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 B3GNT9Q6UX72 402 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 ARHGAP36Q6ZRI8 547 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 MORC1Q86VD1 984 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 FBXO15Q8NCQ5 510 aaPredicted RBP4.63□□□□□ -1.67
UBE2F-221ENST00000480828 LINC00116Q8NCU8 138 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 PARD3BQ8TEW8 1205 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 LMBR1Q8WVP7 490 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 CCDC120Q96HB5 630 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 PPP1R16BQ96T49 567 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 G6PC3Q9BUM1 346 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 TRIT1Q9H3H1 467 aaKnown RBP4.63□□□□□ -1.67
UBE2F-221ENST00000480828 ZMAT4Q9H898 229 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 PPCSQ9HAB8 311 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 CD320Q9NPF0 282 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 DUSP13Q9UII6 198 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 ZNF652Q9Y2D9 606 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 SPO11Q9Y5K1 396 aa4.63□□□□□ -1.67
UBE2F-221ENST00000480828 TIMM13Q9Y5L4 95 aaPredicted RBP4.63□□□□□ -1.67
UBE2F-221ENST00000480828 SSU72P8A0A1W2PR75 194 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 WTIPA6NIX2 430 aaPredicted RBP4.62□□□□□ -1.67
UBE2F-221ENST00000480828 A6NNZ2 444 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 NOTOA8MTQ0 251 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 NKRFO15226 690 aaKnown RBP eCLIP4.62□□□□□ -1.67
UBE2F-221ENST00000480828 PMM2O15305 246 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 SH3BP5O60239 455 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 KDM1AO60341 852 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 MYL3P08590 195 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 GNAT1P11488 350 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 FPR2P25090 351 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 LSP1P33241 339 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 KIF11P52732 1056 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 PHC1P78364 1004 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 KRT85P78386 507 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 SAFBQ15424 915 aaKnown RBP eCLIP4.62□□□□□ -1.67
UBE2F-221ENST00000480828 ZNF174Q15697 407 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 RRP12Q5JTH9 1297 aaKnown RBP4.62□□□□□ -1.67
UBE2F-221ENST00000480828 ESRP1Q6NXG1 681 aaKnown RBP4.62□□□□□ -1.67
UBE2F-221ENST00000480828 CATIPQ7Z7H3 387 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 TEX2Q8IWB9 1127 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 NAT16Q8N8M0 369 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 PDZD8Q8NEN9 1154 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 VPS37AQ8NEZ2 397 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 SLC35G2Q8TBE7 412 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 PANK1Q8TE04 598 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 FBXO41Q8TF61 875 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 MYLIPQ8WY64 445 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 JADE3Q92613 823 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 SHISA4Q96DD7 197 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 SLC2A13Q96QE2 648 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 TAAR9Q96RI9 348 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 STRBPQ96SI9 672 aaKnown RBP4.62□□□□□ -1.67
UBE2F-221ENST00000480828 NUP88Q99567 741 aaPredicted RBP4.62□□□□□ -1.67
UBE2F-221ENST00000480828 ZDHHC5Q9C0B5 715 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 PCIF1Q9H4Z3 704 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 C19orf44Q9H6X5 657 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 NMRK2Q9NPI5 230 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 MAN1C1Q9NR34 630 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 DNM3Q9UQ16 869 aa4.62□□□□□ -1.67
UBE2F-221ENST00000480828 TRBV23OR9-2A0A075B6M9 112 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 TMEM82A0PJX8 343 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 ANO9A1A5B4 782 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 MAN2B1O00754 1011 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 SCDO00767 359 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 TMEM253P0C7T8 217 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 OSMP13725 252 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 RAC2P15153 192 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 HSPA6P17066 643 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 TRAPPC10P48553 1259 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 FXR1P51114 621 aaKnown RBP eCLIP4.61□□□□□ -1.67
UBE2F-221ENST00000480828 USP14P54578 494 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 SRSF2Q01130 221 aaKnown RBP4.61□□□□□ -1.67
UBE2F-221ENST00000480828 MORC3Q14149 939 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 RALBP1Q15311 655 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 SEC23AQ15436 765 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 NR0B2Q15466 257 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 GRAMD1BQ3KR37 738 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 GPR158Q5T848 1215 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 HHIPL2Q6UWX4 724 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 CEP68Q76N32 757 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 SKAP1Q86WV1 359 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 NOSTRINQ8IVI9 506 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 LRRC56Q8IYG6 542 aaPredicted RBP4.61□□□□□ -1.67
UBE2F-221ENST00000480828 ZNF610Q8N9Z0 462 aa4.61□□□□□ -1.67
UBE2F-221ENST00000480828 SH3RF2Q8TEC5 729 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms