RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 CALM2P0DP24 149 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 CALM3P0DP25 149 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 ZKSCAN1P17029 563 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-213ENST00000480102 ADORA2AP29274 412 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 GNAQP50148 359 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 EVCP57679 992 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 HYAL2Q12891 473 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 ZNF211Q13398 564 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-213ENST00000480102 KCTD2Q14681 263 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 SLC4A8Q2Y0W8 1093 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 FAM83BQ5T0W9 1011 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 TMCO4Q5TGY1 634 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 MB21D2Q8IYB1 491 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-213ENST00000480102 ENAHQ8N8S7 591 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-213ENST00000480102 DNERQ8NFT8 737 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 IGDCC4Q8TDY8 1250 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 UBAC1Q9BSL1 405 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 AGXT2Q9BYV1 514 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 GZF1Q9H116 711 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-213ENST00000480102 IL25Q9H293 177 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 EGFL7Q9UHF1 273 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 Q9Y3F1 56 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 PHIPQ8WWQ0 1821 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 NEDD4P46934 1319 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 ZNF236Q9UL36 1845 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 ERICH2A1L162 156 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 ASB14A6NK59 587 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 CCDC85CA6NKD9 419 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 TMEM232C9JQI7 657 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 E7EWF7 191 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 hCG_1984214I3L0E3 225 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 SEPT4O43236 478 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 COL6A1P12109 1028 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 CYBAP13498 195 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 CCL5P13501 91 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 SELPP16109 830 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 EDNRBP24530 442 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 CST5P28325 142 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-213ENST00000480102 KIF5BP33176 963 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 MCM5P33992 734 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 GATA4P43694 442 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 ANAPC15P60006 121 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 C8orf34Q49A92 452 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 FAM47AQ5JRC9 791 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 IFIT1BQ5T764 474 aaKnown RBP5.7□□□□□ -1.5
PTCD3-213ENST00000480102 SYDE2Q5VT97 1194 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 RALYLQ86SE5 291 aaKnown RBP5.7□□□□□ -1.5
PTCD3-213ENST00000480102 MCF2L2Q86YR7 1114 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 SPICE1Q8N0Z3 855 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 ZNF713Q8N859 430 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-213ENST00000480102 FAM133AQ8N9E0 248 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 U2AF1L4Q8WU68 220 aaKnown RBP5.7□□□□□ -1.5
PTCD3-213ENST00000480102 TRIB2Q92519 343 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 MAML3Q96JK9 1138 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 SPACA7Q96KW9 195 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 TINF2Q9BSI4 451 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 SPZ1Q9BXG8 430 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 TM6SF1Q9BZW5 370 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 ABHD16BQ9H3Z7 469 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 RIOX1Q9H6W3 641 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 ACAD9Q9H845 621 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 KAT14Q9H8E8 782 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 ANO2Q9NQ90 1003 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 FBXO28Q9NVF7 368 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 GABRQQ9UN88 632 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 POLIQ9UNA4 740 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 RBM8AQ9Y5S9 174 aaKnown RBP5.7□□□□□ -1.5
PTCD3-213ENST00000480102 A0A0G2JMZ2 1700 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 TNKSO95271 1327 aa5.7□□□□□ -1.5
PTCD3-213ENST00000480102 NID2Q14112 1375 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 NAV1Q8NEY1 1877 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 A6NHS1 94 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 B4DLN1 442 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 C9orf172C9J069 976 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 DNM1LO00429 736 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 SLC27A2O14975 620 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 ZBTB5O15062 677 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 FZD6O60353 706 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 COBLO75128 1261 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 MCCP23508 829 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 PSMA5P28066 241 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 HSPA4P34932 840 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 SERPINB4P48594 390 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 MRPL12P52815 198 aaKnown RBP5.69□□□□□ -1.5
PTCD3-213ENST00000480102 IRX6P78412 446 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-213ENST00000480102 ATP11AP98196 1134 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 EXOSC10Q01780 885 aaKnown RBP5.69□□□□□ -1.5
PTCD3-213ENST00000480102 ATP2B2Q01814 1243 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 PTH1RQ03431 593 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 CACNB2Q08289 660 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-213ENST00000480102 ZYXQ15942 572 aaKnown RBP5.69□□□□□ -1.5
PTCD3-213ENST00000480102 CCDC96Q2M329 555 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 SNRNP48Q6IEG0 339 aaKnown RBP5.69□□□□□ -1.5
PTCD3-213ENST00000480102 GDF6Q6KF10 455 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-213ENST00000480102 DPP9Q86TI2 863 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 CLEC10AQ8IUN9 316 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 LRRC47Q8N1G4 583 aaKnown RBP5.69□□□□□ -1.5
PTCD3-213ENST00000480102 ARRDC4Q8NCT1 418 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 TTC16Q8NEE8 873 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 SHISA4Q96DD7 197 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms