RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 YME1L1Q96TA2 773 aa17.06■□□□□ 0.32
PRKN-207ENST00000479615 COL25A1Q9BXS0 654 aaPredicted RBP17.06■□□□□ 0.32
PRKN-207ENST00000479615 SLKQ9H2G2 1235 aaPredicted RBP17.06■□□□□ 0.32
PRKN-207ENST00000479615 RNF216Q9NWF9 866 aaPredicted RBP17.06■□□□□ 0.32
PRKN-207ENST00000479615 MAFBQ9Y5Q3 323 aaPredicted RBP17.06■□□□□ 0.32
PRKN-207ENST00000479615 MYO9BQ13459 2157 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 KDM3AQ9Y4C1 1321 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 LINC01553A4QN01 128 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 WDR64B1ANS9 1081 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 DDX39AO00148 427 aaKnown RBP17.05■□□□□ 0.32
PRKN-207ENST00000479615 GHRP10912 638 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 SFNP31947 248 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 MRPS5P82675 430 aaKnown RBP17.05■□□□□ 0.32
PRKN-207ENST00000479615 LPIN1Q14693 890 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 FBXO47Q5MNV8 452 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 SWSAP1Q6NVH7 229 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 MOXD1Q6UVY6 613 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 CKAP2LQ8IYA6 745 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 BLIDQ8IZY5 108 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 WASF1Q92558 559 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 IL17RAQ96F46 866 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 CERS4Q9HA82 394 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 TRPV2Q9Y5S1 764 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 CDY2AQ9Y6F7 541 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 CHD9Q3L8U1 2897 aa17.05■□□□□ 0.32
PRKN-207ENST00000479615 KAT6AQ92794 2004 aa17.04■□□□□ 0.32
PRKN-207ENST00000479615 CYP3A7-CYP3A51PA0A087WV96 503 aa17.04■□□□□ 0.32
PRKN-207ENST00000479615 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.04■□□□□ 0.32
PRKN-207ENST00000479615 LCHNA4D1U4 455 aa17.04■□□□□ 0.32
PRKN-207ENST00000479615 MAGEB2O15479 319 aa17.04■□□□□ 0.32
PRKN-207ENST00000479615 CYP3A7P24462 503 aa17.04■□□□□ 0.32
PRKN-207ENST00000479615 KLRC1P26715 233 aa17.04■□□□□ 0.32
PRKN-207ENST00000479615 GRB10Q13322 594 aa17.04■□□□□ 0.32
PRKN-207ENST00000479615 CCDC85BQ15834 202 aaPredicted RBP17.04■□□□□ 0.32
PRKN-207ENST00000479615 Q4G0T1 1027 aa17.04■□□□□ 0.32
PRKN-207ENST00000479615 FAM117BQ6P1L5 589 aa17.04■□□□□ 0.32
PRKN-207ENST00000479615 TMCO2Q7Z6W1 182 aaPredicted RBP17.04■□□□□ 0.32
PRKN-207ENST00000479615 CCDC60Q8IWA6 550 aaPredicted RBP17.04■□□□□ 0.32
PRKN-207ENST00000479615 RDM1Q8NG50 284 aa17.04■□□□□ 0.32
PRKN-207ENST00000479615 TBCKQ8TEA7 893 aa17.04■□□□□ 0.32
PRKN-207ENST00000479615 CELF4Q9BZC1 486 aaKnown RBP17.04■□□□□ 0.32
PRKN-207ENST00000479615 FAM49AQ9H0Q0 323 aaPredicted RBP17.04■□□□□ 0.32
PRKN-207ENST00000479615 COG5Q9UP83 839 aa17.04■□□□□ 0.32
PRKN-207ENST00000479615 RWDD3Q9Y3V2 267 aa17.04■□□□□ 0.32
PRKN-207ENST00000479615 SAMM50Q9Y512 469 aa17.04■□□□□ 0.32
PRKN-207ENST00000479615 STK36Q9NRP7 1315 aa17.03■□□□□ 0.32
PRKN-207ENST00000479615 PFKFB2O60825 505 aa17.03■□□□□ 0.32
PRKN-207ENST00000479615 JAK3P52333 1124 aa17.03■□□□□ 0.32
PRKN-207ENST00000479615 STK3Q13188 491 aa17.03■□□□□ 0.32
PRKN-207ENST00000479615 KRT25Q7Z3Z0 450 aa17.03■□□□□ 0.32
PRKN-207ENST00000479615 IL27Q8NEV9 243 aa17.03■□□□□ 0.32
PRKN-207ENST00000479615 RASGRP4Q8TDF6 673 aa17.03■□□□□ 0.32
PRKN-207ENST00000479615 LENG9Q96B70 501 aa17.03■□□□□ 0.32
PRKN-207ENST00000479615 ASB2Q96Q27 587 aa17.03■□□□□ 0.32
PRKN-207ENST00000479615 NAP1L4Q99733 375 aaKnown RBP17.03■□□□□ 0.32
PRKN-207ENST00000479615 SUGCTQ9HAC7 445 aa17.03■□□□□ 0.32
PRKN-207ENST00000479615 NRBP2Q9NSY0 501 aa17.03■□□□□ 0.32
PRKN-207ENST00000479615 GBF1Q92538 1859 aa17.03■□□□□ 0.32
PRKN-207ENST00000479615 DOCK5Q9H7D0 1870 aa17.03■□□□□ 0.32
PRKN-207ENST00000479615 IGSF9BQ9UPX0 1349 aa17.02■□□□□ 0.32
PRKN-207ENST00000479615 EPOPA6NHQ4 379 aa17.02■□□□□ 0.32
PRKN-207ENST00000479615 M0R2N6 131 aa17.02■□□□□ 0.32
PRKN-207ENST00000479615 RFXAPO00287 272 aa17.02■□□□□ 0.32
PRKN-207ENST00000479615 ENPP3O14638 875 aa17.02■□□□□ 0.32
PRKN-207ENST00000479615 GAS7O60861 476 aa17.02■□□□□ 0.32
PRKN-207ENST00000479615 PPFIA3O75145 1194 aa17.02■□□□□ 0.32
PRKN-207ENST00000479615 ARHGEF15O94989 841 aa17.02■□□□□ 0.32
PRKN-207ENST00000479615 SCRN1Q12765 414 aa17.02■□□□□ 0.32
PRKN-207ENST00000479615 NONOQ15233 471 aaKnown RBP eCLIP17.02■□□□□ 0.32
PRKN-207ENST00000479615 PTPROQ16827 1216 aa17.02■□□□□ 0.32
PRKN-207ENST00000479615 MICALL1Q8N3F8 863 aa17.02■□□□□ 0.32
PRKN-207ENST00000479615 FBXO22Q8NEZ5 403 aa17.02■□□□□ 0.32
PRKN-207ENST00000479615 SLC5A5Q92911 643 aa17.02■□□□□ 0.32
PRKN-207ENST00000479615 TEKT3Q9BXF9 490 aa17.02■□□□□ 0.32
PRKN-207ENST00000479615 DISC1Q9NRI5 854 aa17.02■□□□□ 0.32
PRKN-207ENST00000479615 MSH4O15457 936 aa17.01■□□□□ 0.31
PRKN-207ENST00000479615 LPXNO60711 386 aa17.01■□□□□ 0.31
PRKN-207ENST00000479615 UPP2O95045 317 aa17.01■□□□□ 0.31
PRKN-207ENST00000479615 TMOD1P28289 359 aa17.01■□□□□ 0.31
PRKN-207ENST00000479615 PAK2Q13177 524 aa17.01■□□□□ 0.31
PRKN-207ENST00000479615 SKIV2LQ15477 1246 aaKnown RBP17.01■□□□□ 0.31
PRKN-207ENST00000479615 LRCH2Q5VUJ6 765 aa17.01■□□□□ 0.31
PRKN-207ENST00000479615 FIBCD1Q8N539 461 aa17.01■□□□□ 0.31
PRKN-207ENST00000479615 GABBR1Q9UBS5 961 aa17.01■□□□□ 0.31
PRKN-207ENST00000479615 UNC80Q8N2C7 3258 aa17.01■□□□□ 0.31
PRKN-207ENST00000479615 CUL9Q8IWT3 2517 aa17.01■□□□□ 0.31
PRKN-207ENST00000479615 COL4A6Q14031 1691 aa17.01■□□□□ 0.31
PRKN-207ENST00000479615 CCDC194A0A1B0GVG4 234 aa17■□□□□ 0.31
PRKN-207ENST00000479615 ADAMTS3O15072 1205 aa17■□□□□ 0.31
PRKN-207ENST00000479615 RB1P06400 928 aa17■□□□□ 0.31
PRKN-207ENST00000479615 STAG3L1P0CL83 205 aa17■□□□□ 0.31
PRKN-207ENST00000479615 GCFC2P16383 781 aaKnown RBP17■□□□□ 0.31
PRKN-207ENST00000479615 ATP4AP20648 1035 aa17■□□□□ 0.31
PRKN-207ENST00000479615 CDC42EP1Q00587 391 aa17■□□□□ 0.31
PRKN-207ENST00000479615 KIAA0319LQ8IZA0 1049 aa17■□□□□ 0.31
PRKN-207ENST00000479615 TRAPPC12Q8WVT3 735 aa17■□□□□ 0.31
PRKN-207ENST00000479615 MBOAT7Q96N66 472 aa17■□□□□ 0.31
PRKN-207ENST00000479615 LARP6Q9BRS8 491 aaKnown RBP17■□□□□ 0.31
PRKN-207ENST00000479615 PHF20Q9BVI0 1012 aa17■□□□□ 0.31
PRKN-207ENST00000479615 OSBPL7Q9BZF2 842 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms