RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 RBM43Q6ZSC3 357 aaKnown RBP14.66□□□□□ -0.06
CHD3-210ENST00000479080 TNS4Q8IZW8 715 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 IQUBQ8NA54 791 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 KLHDC9Q8NEP7 349 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 SH2D3AQ9BRG2 576 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 ZSWIM4Q9H7M6 989 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 ZNF302Q9NR11 478 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 STK17AQ9UEE5 414 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 CCDC39Q9UFE4 941 aa14.66□□□□□ -0.06
CHD3-210ENST00000479080 WDR81Q562E7 1941 aa14.65□□□□□ -0.06
CHD3-210ENST00000479080 MYMKA6NI61 221 aa14.65□□□□□ -0.06
CHD3-210ENST00000479080 ZBTB42B2RXF5 422 aa14.65□□□□□ -0.06
CHD3-210ENST00000479080 NOP56O00567 594 aaKnown RBP14.65□□□□□ -0.06
CHD3-210ENST00000479080 BACH1O14867 736 aa14.65□□□□□ -0.06
CHD3-210ENST00000479080 EYA4O95677 639 aa14.65□□□□□ -0.06
CHD3-210ENST00000479080 PLA2G4BP0C869 781 aa14.65□□□□□ -0.06
CHD3-210ENST00000479080 STAT5BP51692 787 aa14.65□□□□□ -0.06
CHD3-210ENST00000479080 NPEPPSP55786 919 aa14.65□□□□□ -0.06
CHD3-210ENST00000479080 PLCB4Q15147 1175 aa14.65□□□□□ -0.06
CHD3-210ENST00000479080 CAMK4Q16566 473 aa14.65□□□□□ -0.06
CHD3-210ENST00000479080 ARSHQ5FYA8 562 aa14.65□□□□□ -0.06
CHD3-210ENST00000479080 FBXO46Q6PJ61 603 aaPredicted RBP14.65□□□□□ -0.06
CHD3-210ENST00000479080 PPP1R13LQ8WUF5 828 aa14.65□□□□□ -0.06
CHD3-210ENST00000479080 LARP4BQ92615 738 aaKnown RBP14.65□□□□□ -0.06
CHD3-210ENST00000479080 RUSC1Q9BVN2 902 aa14.65□□□□□ -0.06
CHD3-210ENST00000479080 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.65□□□□□ -0.06
CHD3-210ENST00000479080 NT5C3AQ9H0P0 336 aa14.65□□□□□ -0.06
CHD3-210ENST00000479080 TCEAL9Q9UHQ7 104 aa14.65□□□□□ -0.06
CHD3-210ENST00000479080 STK24Q9Y6E0 443 aa14.65□□□□□ -0.06
CHD3-210ENST00000479080 BRCA2P51587 3418 aa14.64□□□□□ -0.07
CHD3-210ENST00000479080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.64□□□□□ -0.07
CHD3-210ENST00000479080 NPHP3-ACAD11A0A0J9YXS1 232 aa14.64□□□□□ -0.07
CHD3-210ENST00000479080 F2P00734 622 aa14.64□□□□□ -0.07
CHD3-210ENST00000479080 OATP04181 439 aa14.64□□□□□ -0.07
CHD3-210ENST00000479080 CYP11B2P19099 503 aa14.64□□□□□ -0.07
CHD3-210ENST00000479080 MARK3P27448 753 aa14.64□□□□□ -0.07
CHD3-210ENST00000479080 RARRES1P49788 294 aa14.64□□□□□ -0.07
CHD3-210ENST00000479080 PNOCQ13519 176 aa14.64□□□□□ -0.07
CHD3-210ENST00000479080 CUL4BQ13620 913 aa14.64□□□□□ -0.07
CHD3-210ENST00000479080 TARBP2Q15633 366 aaKnown RBP14.64□□□□□ -0.07
CHD3-210ENST00000479080 FSCN1Q16658 493 aaKnown RBP14.64□□□□□ -0.07
CHD3-210ENST00000479080 PLPPR4Q7Z2D5 763 aa14.64□□□□□ -0.07
CHD3-210ENST00000479080 SYT2Q8N9I0 419 aaPredicted RBP14.64□□□□□ -0.07
CHD3-210ENST00000479080 CNNM3Q8NE01 707 aa14.64□□□□□ -0.07
CHD3-210ENST00000479080 RASSF8Q8NHQ8 419 aa14.64□□□□□ -0.07
CHD3-210ENST00000479080 CDK5RAP3Q96JB5 506 aa14.64□□□□□ -0.07
CHD3-210ENST00000479080 BHMT2Q9H2M3 363 aa14.64□□□□□ -0.07
CHD3-210ENST00000479080 RNPEPQ9H4A4 650 aa14.64□□□□□ -0.07
CHD3-210ENST00000479080 PAK6Q9NQU5 681 aaPredicted RBP14.64□□□□□ -0.07
CHD3-210ENST00000479080 USP25Q9UHP3 1055 aa14.64□□□□□ -0.07
CHD3-210ENST00000479080 HAS3O00219 553 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 KLRC4O43908 158 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 KINO60870 393 aaKnown RBP14.63□□□□□ -0.07
CHD3-210ENST00000479080 PPFIA4O75335 1185 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 RARBP10826 455 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 CST5P28325 142 aaPredicted RBP14.63□□□□□ -0.07
CHD3-210ENST00000479080 YWHABP31946 246 aaKnown RBP14.63□□□□□ -0.07
CHD3-210ENST00000479080 AFMP43652 599 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 PURAQ00577 322 aaKnown RBP14.63□□□□□ -0.07
CHD3-210ENST00000479080 DPYDQ12882 1025 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 MAPK7Q13164 816 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 HIC1Q14526 733 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 DHX8Q14562 1220 aaKnown RBP14.63□□□□□ -0.07
CHD3-210ENST00000479080 SKOR2Q2VWA4 1001 aaPredicted RBP14.63□□□□□ -0.07
CHD3-210ENST00000479080 SLC9C1Q4G0N8 1177 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 CCDC183Q5T5S1 534 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 TRMT1LQ7Z2T5 733 aaKnown RBP14.63□□□□□ -0.07
CHD3-210ENST00000479080 ELOA2Q8IYF1 753 aaPredicted RBP14.63□□□□□ -0.07
CHD3-210ENST00000479080 ATP6V0A1Q93050 837 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 ARMC5Q96C12 935 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 DNAJC19Q96DA6 116 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 ZNF333Q96JL9 665 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 NACC1Q96RE7 527 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 NUP62CLQ9H1M0 184 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 BLZF1Q9H2G9 400 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 CUEDC2Q9H467 287 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 HMX1Q9NP08 348 aaPredicted RBP14.63□□□□□ -0.07
CHD3-210ENST00000479080 XPNPEP3Q9NQH7 507 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 DBR1Q9UK59 544 aaKnown RBP14.63□□□□□ -0.07
CHD3-210ENST00000479080 DNM3Q9UQ16 869 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 ARID2Q68CP9 1835 aa14.63□□□□□ -0.07
CHD3-210ENST00000479080 GTPBP6O43824 516 aaPredicted RBP14.62□□□□□ -0.07
CHD3-210ENST00000479080 MYCP01106 439 aaPredicted RBP14.62□□□□□ -0.07
CHD3-210ENST00000479080 C6orf222P0C671 652 aaPredicted RBP14.62□□□□□ -0.07
CHD3-210ENST00000479080 CCL5P13501 91 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 CACNB1Q02641 598 aaPredicted RBP14.62□□□□□ -0.07
CHD3-210ENST00000479080 POSTNQ15063 836 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 LRRC41Q15345 812 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 DGKDQ16760 1214 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 XKR3Q5GH77 459 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 FAM160B1Q5W0V3 765 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 RINT1Q6NUQ1 792 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 C1orf186Q6ZWK4 172 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 GPBP1Q86WP2 473 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 DAW1Q8N136 415 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 KCTD17Q8N5Z5 321 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 SPATA20Q8TB22 786 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 ATP8B4Q8TF62 1192 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 ZBTB10Q96DT7 871 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 PYM1Q9BRP8 204 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms