RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 IER5Q5VY09 327 aa19.07■□□□□ 0.64
TRIM13-208ENST00000478111 GJD3Q8N144 294 aa19.07■□□□□ 0.64
TRIM13-208ENST00000478111 CRYGNQ8WXF5 182 aa19.07■□□□□ 0.64
TRIM13-208ENST00000478111 SDF4Q9BRK5 362 aa19.07■□□□□ 0.64
TRIM13-208ENST00000478111 TRPC6Q9Y210 931 aa19.07■□□□□ 0.64
TRIM13-208ENST00000478111 POTEB3A0JP26 581 aa19.06■□□□□ 0.64
TRIM13-208ENST00000478111 hCG_1984214I3L0E3 225 aa19.06■□□□□ 0.64
TRIM13-208ENST00000478111 ADAMTS3O15072 1205 aa19.06■□□□□ 0.64
TRIM13-208ENST00000478111 CAMK1Q14012 370 aa19.06■□□□□ 0.64
TRIM13-208ENST00000478111 BTG3Q14201 252 aaPredicted RBP19.06■□□□□ 0.64
TRIM13-208ENST00000478111 CTC1Q2NKJ3 1217 aa19.06■□□□□ 0.64
TRIM13-208ENST00000478111 PUS10Q3MIT2 529 aaKnown RBP19.06■□□□□ 0.64
TRIM13-208ENST00000478111 TMEM31Q5JXX7 168 aa19.06■□□□□ 0.64
TRIM13-208ENST00000478111 POTEBQ6S5H4 581 aa19.06■□□□□ 0.64
TRIM13-208ENST00000478111 MTHFD1LQ6UB35 978 aa19.06■□□□□ 0.64
TRIM13-208ENST00000478111 ABHD15Q6UXT9 468 aa19.06■□□□□ 0.64
TRIM13-208ENST00000478111 ZNF713Q8N859 430 aaPredicted RBP19.06■□□□□ 0.64
TRIM13-208ENST00000478111 C11orf84Q9BUA3 381 aaPredicted RBP19.06■□□□□ 0.64
TRIM13-208ENST00000478111 CELF4Q9BZC1 486 aaKnown RBP19.06■□□□□ 0.64
TRIM13-208ENST00000478111 LMAN2LQ9H0V9 348 aa19.06■□□□□ 0.64
TRIM13-208ENST00000478111 PADI3Q9ULW8 664 aa19.06■□□□□ 0.64
TRIM13-208ENST00000478111 RWDD3Q9Y3V2 267 aa19.06■□□□□ 0.64
TRIM13-208ENST00000478111 TRPV2Q9Y5S1 764 aa19.06■□□□□ 0.64
TRIM13-208ENST00000478111 FNDC1Q4ZHG4 1894 aaPredicted RBP19.05■□□□□ 0.64
TRIM13-208ENST00000478111 IGSF9BQ9UPX0 1349 aa19.05■□□□□ 0.64
TRIM13-208ENST00000478111 KDM3AQ9Y4C1 1321 aa19.05■□□□□ 0.64
TRIM13-208ENST00000478111 KLF18A0A0U1RQI7 1052 aa19.05■□□□□ 0.64
TRIM13-208ENST00000478111 SMIM35A0A1B0GVV1 85 aa19.05■□□□□ 0.64
TRIM13-208ENST00000478111 GOLGA8AA7E2F4 631 aa19.05■□□□□ 0.64
TRIM13-208ENST00000478111 GOLGA8BA8MQT2 603 aa19.05■□□□□ 0.64
TRIM13-208ENST00000478111 FAM86B1E9PN63 330 aa19.05■□□□□ 0.64
TRIM13-208ENST00000478111 DHX15O43143 795 aaKnown RBP19.05■□□□□ 0.64
TRIM13-208ENST00000478111 FAM86B2P0C5J1 330 aa19.05■□□□□ 0.64
TRIM13-208ENST00000478111 ADD1P35611 737 aaKnown RBP19.05■□□□□ 0.64
TRIM13-208ENST00000478111 PLA2G5P39877 138 aa19.05■□□□□ 0.64
TRIM13-208ENST00000478111 AP3B2Q13367 1082 aa19.05■□□□□ 0.64
TRIM13-208ENST00000478111 NIPA1Q7RTP0 329 aa19.05■□□□□ 0.64
TRIM13-208ENST00000478111 TNPO1Q92973 898 aaKnown RBP19.05■□□□□ 0.64
TRIM13-208ENST00000478111 FTHL17Q9BXU8 183 aa19.05■□□□□ 0.64
TRIM13-208ENST00000478111 TMX1Q9H3N1 280 aa19.05■□□□□ 0.64
TRIM13-208ENST00000478111 MUC6Q6W4X9 2439 aa19.05■□□□□ 0.64
TRIM13-208ENST00000478111 IGLV3-22A0A075B6J6 115 aa19.04■□□□□ 0.64
TRIM13-208ENST00000478111 FAM86C2PA6NEL3 165 aa19.04■□□□□ 0.64
TRIM13-208ENST00000478111 RCAN1P53805 252 aa19.04■□□□□ 0.64
TRIM13-208ENST00000478111 HYAL1Q12794 435 aa19.04■□□□□ 0.64
TRIM13-208ENST00000478111 NME8Q8N427 588 aa19.04■□□□□ 0.64
TRIM13-208ENST00000478111 PLVAPQ9BX97 442 aa19.04■□□□□ 0.64
TRIM13-208ENST00000478111 GLT8D2Q9H1C3 349 aa19.04■□□□□ 0.64
TRIM13-208ENST00000478111 PLXNA4Q9HCM2 1894 aa19.04■□□□□ 0.64
TRIM13-208ENST00000478111 CLDND1Q9NY35 253 aa19.04■□□□□ 0.64
TRIM13-208ENST00000478111 MRPL42Q9Y6G3 142 aaKnown RBP19.04■□□□□ 0.64
TRIM13-208ENST00000478111 WDFY4Q6ZS81 3184 aa19.04■□□□□ 0.64
TRIM13-208ENST00000478111 CYP3A4P08684 503 aa19.03■□□□□ 0.64
TRIM13-208ENST00000478111 CPA1P15085 419 aa19.03■□□□□ 0.64
TRIM13-208ENST00000478111 ATP4AP20648 1035 aa19.03■□□□□ 0.64
TRIM13-208ENST00000478111 KLRC1P26715 233 aa19.03■□□□□ 0.64
TRIM13-208ENST00000478111 SLC26A2P50443 739 aa19.03■□□□□ 0.64
TRIM13-208ENST00000478111 DLX2Q07687 328 aaPredicted RBP19.03■□□□□ 0.64
TRIM13-208ENST00000478111 PFKFB3Q16875 520 aaPredicted RBP19.03■□□□□ 0.64
TRIM13-208ENST00000478111 JAKMIP3Q5VZ66 844 aa19.03■□□□□ 0.64
TRIM13-208ENST00000478111 NPAS4Q8IUM7 802 aa19.03■□□□□ 0.64
TRIM13-208ENST00000478111 CCDC60Q8IWA6 550 aaPredicted RBP19.03■□□□□ 0.64
TRIM13-208ENST00000478111 CMTR2Q8IYT2 770 aaKnown RBP19.03■□□□□ 0.64
TRIM13-208ENST00000478111 KCNB2Q92953 911 aa19.03■□□□□ 0.64
TRIM13-208ENST00000478111 CDHR5Q9HBB8 845 aa19.03■□□□□ 0.64
TRIM13-208ENST00000478111 ALG13Q9NP73 1137 aaKnown RBP19.03■□□□□ 0.64
TRIM13-208ENST00000478111 PLAGL2Q9UPG8 496 aa19.03■□□□□ 0.64
TRIM13-208ENST00000478111 ZBTB42B2RXF5 422 aa19.02■□□□□ 0.64
TRIM13-208ENST00000478111 DDX39AO00148 427 aaKnown RBP19.02■□□□□ 0.64
TRIM13-208ENST00000478111 NCK2O43639 380 aa19.02■□□□□ 0.64
TRIM13-208ENST00000478111 MMP1P03956 469 aa19.02■□□□□ 0.64
TRIM13-208ENST00000478111 DNAJB1P25685 340 aa19.02■□□□□ 0.64
TRIM13-208ENST00000478111 GTF2F1P35269 517 aaKnown RBP eCLIP19.02■□□□□ 0.644e-7■■□□□ 11.9
TRIM13-208ENST00000478111 KRT76Q01546 638 aa19.02■□□□□ 0.64
TRIM13-208ENST00000478111 PAK2Q13177 524 aa19.02■□□□□ 0.64
TRIM13-208ENST00000478111 KRT32Q14532 448 aa19.02■□□□□ 0.64
TRIM13-208ENST00000478111 EP400NLQ6ZTU2 488 aa19.02■□□□□ 0.64
TRIM13-208ENST00000478111 CENPQQ7L2Z9 268 aaPredicted RBP19.02■□□□□ 0.64
TRIM13-208ENST00000478111 PLA2G4DQ86XP0 818 aa19.02■□□□□ 0.64
TRIM13-208ENST00000478111 KIAA0319LQ8IZA0 1049 aa19.02■□□□□ 0.64
TRIM13-208ENST00000478111 ATP8B4Q8TF62 1192 aa19.02■□□□□ 0.64
TRIM13-208ENST00000478111 P2RX5Q93086 422 aa19.02■□□□□ 0.64
TRIM13-208ENST00000478111 C19orf67A6NJJ6 358 aa19.01■□□□□ 0.63
TRIM13-208ENST00000478111 M0QZ92 97 aa19.01■□□□□ 0.63
TRIM13-208ENST00000478111 HBP1O60381 514 aa19.01■□□□□ 0.63
TRIM13-208ENST00000478111 CDC45O75419 566 aa19.01■□□□□ 0.63
TRIM13-208ENST00000478111 SCG2P13521 617 aa19.01■□□□□ 0.63
TRIM13-208ENST00000478111 SSTR3P32745 418 aaPredicted RBP19.01■□□□□ 0.63
TRIM13-208ENST00000478111 ZNF76P36508 570 aa19.01■□□□□ 0.63
TRIM13-208ENST00000478111 GATMP50440 423 aa19.01■□□□□ 0.63
TRIM13-208ENST00000478111 ZP2Q05996 745 aa19.01■□□□□ 0.63
TRIM13-208ENST00000478111 APOBRQ0VD83 1088 aa19.01■□□□□ 0.63
TRIM13-208ENST00000478111 PKN1Q16512 942 aa19.01■□□□□ 0.63
TRIM13-208ENST00000478111 TMEM266Q2M3C6 531 aa19.01■□□□□ 0.63
TRIM13-208ENST00000478111 SPPL3Q8TCT6 385 aa19.01■□□□□ 0.63
TRIM13-208ENST00000478111 TMEM40Q8WWA1 233 aa19.01■□□□□ 0.63
TRIM13-208ENST00000478111 FAM122AQ96E09 287 aa19.01■□□□□ 0.63
TRIM13-208ENST00000478111 UIMC1Q96RL1 719 aa19.01■□□□□ 0.63
TRIM13-208ENST00000478111 ZMYND12Q9H0C1 365 aa19.01■□□□□ 0.63
TRIM13-208ENST00000478111 ARIH1Q9Y4X5 557 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms