RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 TTLL11Q8NHH1 800 aa6.54□□□□□ -1.36
VPS45-207ENST00000477558 WDR90Q96KV7 1748 aa6.54□□□□□ -1.36
VPS45-207ENST00000477558 PSMD1Q99460 953 aa6.54□□□□□ -1.36
VPS45-207ENST00000477558 APBA2Q99767 749 aa6.54□□□□□ -1.36
VPS45-207ENST00000477558 DSCC1Q9BVC3 393 aa6.54□□□□□ -1.36
VPS45-207ENST00000477558 RTFDC1Q9BY42 306 aaPredicted RBP6.54□□□□□ -1.36
VPS45-207ENST00000477558 API5Q9BZZ5 524 aaKnown RBP6.54□□□□□ -1.36
VPS45-207ENST00000477558 USP44Q9H0E7 712 aa6.54□□□□□ -1.36
VPS45-207ENST00000477558 NOL6Q9H6R4 1146 aaKnown RBP6.54□□□□□ -1.36
VPS45-207ENST00000477558 NOB1Q9ULX3 412 aaKnown RBP6.54□□□□□ -1.36
VPS45-207ENST00000477558 ATP6V0A2Q9Y487 856 aa6.54□□□□□ -1.36
VPS45-207ENST00000477558 SCN9AQ15858 1988 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 ZNF609O15014 1411 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 H0Y8X5 98 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 NPHP1O15259 732 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 BBOX1O75936 387 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 NBPF7P0C2Y1 421 aaPredicted RBP6.53□□□□□ -1.36
VPS45-207ENST00000477558 ITGA4P13612 1032 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 FUT4P22083 530 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 CCT4P50991 539 aaKnown RBP6.53□□□□□ -1.36
VPS45-207ENST00000477558 GP2P55259 537 aaKnown RBP6.53□□□□□ -1.36
VPS45-207ENST00000477558 EGR3Q06889 387 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 CCDC93Q567U6 631 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 EPHA10Q5JZY3 1008 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 ANKRD44Q8N8A2 993 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 UBXN4Q92575 508 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 RPGRQ92834 1020 aaKnown RBP6.53□□□□□ -1.36
VPS45-207ENST00000477558 CELF1Q92879 486 aaKnown RBP6.53□□□□□ -1.36
VPS45-207ENST00000477558 ZNF622Q969S3 477 aaKnown RBP eCLIP6.53□□□□□ -1.362e-6■■□□□ 14.2
VPS45-207ENST00000477558 RBM17Q96I25 401 aaKnown RBP6.53□□□□□ -1.36
VPS45-207ENST00000477558 FOXP3Q9BZS1 431 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 PRR13Q9NZ81 148 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 LMCD1Q9NZU5 365 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 WHRNQ9P202 907 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 ADAMTS6Q9UKP5 1117 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 FHOD1Q9Y613 1164 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 ARAP2Q8WZ64 1704 aa6.53□□□□□ -1.36
VPS45-207ENST00000477558 CCDC85CA6NKD9 419 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 SUSD5O60279 629 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 PPM1BO75688 479 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 SERINC3Q13530 473 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 PLCL1Q15111 1095 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 CCDC152Q4G0S7 254 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 CRTC3Q6UUV7 619 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 OLFM4Q6UX06 510 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 ZPBP2Q6X784 338 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 SP8Q8IXZ3 490 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 ABI1Q8IZP0 508 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 SUCLG2Q96I99 432 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 ZDHHC15Q96MV8 337 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 GBP3Q9H0R5 595 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 TAOK3Q9H2K8 898 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 GREM2Q9H772 168 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 SIRPGQ9P1W8 387 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 TNNQ9UQP3 1299 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 SUGT1Q9Y2Z0 365 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 OAS3Q9Y6K5 1087 aaKnown RBP6.52□□□□□ -1.37
VPS45-207ENST00000477558 IRS2Q9Y4H2 1338 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 ADAMTSL1Q8N6G6 1762 aa6.52□□□□□ -1.37
VPS45-207ENST00000477558 IPO8O15397 1037 aaKnown RBP6.51□□□□□ -1.37
VPS45-207ENST00000477558 SYPP08247 313 aa6.51□□□□□ -1.37
VPS45-207ENST00000477558 TEKQ02763 1124 aa6.51□□□□□ -1.37
VPS45-207ENST00000477558 MTX1Q13505 466 aa6.51□□□□□ -1.37
VPS45-207ENST00000477558 SV2CQ496J9 727 aa6.51□□□□□ -1.37
VPS45-207ENST00000477558 RALGPS1Q5JS13 557 aa6.51□□□□□ -1.37
VPS45-207ENST00000477558 ZKSCAN2Q63HK3 967 aa6.51□□□□□ -1.37
VPS45-207ENST00000477558 DDX46Q7L014 1031 aaKnown RBP6.51□□□□□ -1.37
VPS45-207ENST00000477558 RTKN2Q8IZC4 609 aa6.51□□□□□ -1.37
VPS45-207ENST00000477558 PI4K2BQ8TCG2 481 aa6.51□□□□□ -1.37
VPS45-207ENST00000477558 PPP1R14AQ96A00 147 aa6.51□□□□□ -1.37
VPS45-207ENST00000477558 ADAMTS10Q9H324 1103 aa6.51□□□□□ -1.37
VPS45-207ENST00000477558 MBNL3Q9NUK0 354 aaKnown RBP6.51□□□□□ -1.37
VPS45-207ENST00000477558 TCFL5Q9UL49 500 aa6.51□□□□□ -1.37
VPS45-207ENST00000477558 DIS3Q9Y2L1 958 aaKnown RBP6.51□□□□□ -1.37
VPS45-207ENST00000477558 MSRB2Q9Y3D2 182 aa6.51□□□□□ -1.37
VPS45-207ENST00000477558 SCN4AP35499 1836 aa6.51□□□□□ -1.37
VPS45-207ENST00000477558 CEP350Q5VT06 3117 aa6.51□□□□□ -1.37
VPS45-207ENST00000477558 DNAJC25-GNG10A0A024R161 153 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 FAM221BA6H8Z2 402 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 FKTNO75072 461 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 GSNP06396 782 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 RNASE1P07998 156 aaKnown RBP6.5□□□□□ -1.37
VPS45-207ENST00000477558 VAV1P15498 845 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 TAL1P17542 331 aaPredicted RBP6.5□□□□□ -1.37
VPS45-207ENST00000477558 RFX5P48382 616 aaPredicted RBP6.5□□□□□ -1.37
VPS45-207ENST00000477558 RPS8P62241 208 aaKnown RBP6.5□□□□□ -1.37
VPS45-207ENST00000477558 SLC4A10Q6U841 1118 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 EEPD1Q7L9B9 569 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 ARHGEF39Q8N4T4 335 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 LRRN4CLQ8ND94 238 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 RCC1LQ96I51 464 aaKnown RBP6.5□□□□□ -1.37
VPS45-207ENST00000477558 MEIS3Q99687 375 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 MCMBPQ9BTE3 642 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 LNPKQ9C0E8 428 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 VPS33BQ9H267 617 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 SLAMF8Q9P0V8 285 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 CGGBP1Q9UFW8 167 aaPredicted RBP6.5□□□□□ -1.37
VPS45-207ENST00000477558 RCAN3Q9UKA8 241 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 AKT3Q9Y243 479 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 SSU72P8A0A1W2PR75 194 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms