RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 SAMSN1Q9NSI8 373 aaKnown RBP7.41□□□□□ -1.22
LDB3-206ENST00000477489 SEL1LQ9UBV2 794 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 FBXO40Q9UH90 709 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 KIAA1024Q9UPX6 916 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 SLC27A5Q9Y2P5 690 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 GDAQ9Y2T3 454 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 UBIAD1Q9Y5Z9 338 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 CSADQ9Y600 493 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 UBE4BO95155 1302 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 GLTPD2A6NH11 291 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 LGALS16A8MUM7 142 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 B4DLN1 442 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 N4BP3O15049 544 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 ZSCAN12O43309 604 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 GAS7O60861 476 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 SPATA31C1P0DKV0 1188 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 SCP2P22307 547 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 HOXA13P31271 388 aaPredicted RBP7.4□□□□□ -1.22
LDB3-206ENST00000477489 ABCD1P33897 745 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 EPS15P42566 896 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 JAK3P52333 1124 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 COPB1P53618 953 aaKnown RBP7.4□□□□□ -1.22
LDB3-206ENST00000477489 HIRAP54198 1017 aaPredicted RBP7.4□□□□□ -1.22
LDB3-206ENST00000477489 SLC12A3P55017 1021 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 CCZ1BP86790 482 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 CCZ1P86791 482 aaPredicted RBP7.4□□□□□ -1.22
LDB3-206ENST00000477489 PPP2R3AQ06190 1150 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 PABPC4Q13310 644 aaKnown RBP eCLIP7.4□□□□□ -1.22
LDB3-206ENST00000477489 ALCAMQ13740 583 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 MCM6Q14566 821 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 ZYXQ15942 572 aaKnown RBP7.4□□□□□ -1.22
LDB3-206ENST00000477489 NFIL3Q16649 462 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 BMT2Q1RMZ1 405 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 EDRF1Q3B7T1 1238 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 FAM26FQ5R3K3 315 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 TRAF7Q6Q0C0 670 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 RNF207Q6ZRF8 634 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 TRIM67Q6ZTA4 783 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 STXBP4Q6ZWJ1 553 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 NLRX1Q86UT6 975 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 CATSPER3Q86XQ3 398 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 ERO1BQ86YB8 467 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 TRMT44Q8IYL2 757 aaKnown RBP7.4□□□□□ -1.22
LDB3-206ENST00000477489 ANKRD13AQ8IZ07 590 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 MYOCDQ8IZQ8 938 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 CSGALNACT2Q8N6G5 542 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 KIAA0895Q8NCT3 520 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 SYTL5Q8TDW5 730 aaPredicted RBP7.4□□□□□ -1.22
LDB3-206ENST00000477489 LRRC15Q8TF66 581 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 STAMQ92783 540 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 CCDC102AQ96A19 550 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 DNAJC19Q96DA6 116 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 NAP1L5Q96NT1 182 aaPredicted RBP7.4□□□□□ -1.22
LDB3-206ENST00000477489 TRERF1Q96PN7 1200 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 IWS1Q96ST2 819 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 P2RX7Q99572 595 aaKnown RBP7.4□□□□□ -1.22
LDB3-206ENST00000477489 ZNF577Q9BSK1 485 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 EDEM3Q9BZQ6 932 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 OLFML3Q9NRN5 406 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 FBXO28Q9NVF7 368 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 TCEAL9Q9UHQ7 104 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 NRBP1Q9UHY1 535 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 ODF2LQ9ULJ1 636 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 COL4A3BPQ9Y5P4 624 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 ZHX2Q9Y6X8 837 aa7.4□□□□□ -1.22
LDB3-206ENST00000477489 COL11A1P12107 1806 aaPredicted RBP7.4□□□□□ -1.23
LDB3-206ENST00000477489 PFASO15067 1338 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 ASTN2O75129 1339 aaPredicted RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 NFASCO94856 1347 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 SPDYE5A6NIY4 337 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 POTECB2RU33 542 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 IPO5O00410 1097 aaKnown RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 EIF3DO15371 548 aaKnown RBP eCLIP7.39□□□□□ -1.23
LDB3-206ENST00000477489 MED24O75448 989 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 USP2O75604 605 aaPredicted RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 KRT18P05783 430 aaKnown RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 P4HBP07237 508 aaKnown RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 MAPTP10636 758 aaKnown RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 ALAS1P13196 640 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 CD46P15529 392 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 CYP11B2P19099 503 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 CASP1P29466 404 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 CCND2P30279 289 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 MARSP56192 900 aaKnown RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 SNAP25P60880 206 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 SNRPFP62306 86 aaKnown RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 RPS6P62753 249 aaKnown RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 FKBP3Q00688 224 aaKnown RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 KRT76Q01546 638 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 STK4Q13043 487 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 COASYQ13057 564 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 ARID5BQ14865 1188 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 KRT31Q15323 416 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 PLA2G2CQ5R387 149 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 FKBP15Q5T1M5 1219 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 NCAPH2Q6IBW4 605 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 ARMCX5Q6P1M9 558 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 ZNF598Q86UK7 904 aaKnown RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 CCDC84Q86UT8 332 aaPredicted RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 PNMA8AQ86V59 439 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms