RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	SPO11	Q9Y5K1	396 aa		4.67	□□□□□ -1.66
TARDBP-208	ENST00000477447	PRAMEF22	A3QJZ6	481 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	NUAK1	O60285	661 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	ENO2	P09104	434 aa	Predicted RBP	4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	FNTB	P49356	437 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	HTRA3	P83110	453 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	TMPRSS15	P98073	1019 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	PTPRO	Q16827	1216 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	ATP13A4	Q4VNC1	1196 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	PRAMEF18	Q5VWM3	479 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	ESRP1	Q6NXG1	681 aa	Known RBP	4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	TTLL6	Q8N841	843 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	ZCRB1	Q8TBF4	217 aa	Known RBP	4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	IGDCC4	Q8TDY8	1250 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	GPATCH3	Q96I76	525 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	WRNIP1	Q96S55	665 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	EMC7	Q9NPA0	242 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	INCENP	Q9NQS7	918 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	UCKL1	Q9NWZ5	548 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	BTBD7	Q9P203	1132 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	ARHGAP20	Q9P2F6	1191 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	MCM8	Q9UJA3	840 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	ZFP69B	Q9UJL9	534 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	ASB1	Q9Y576	335 aa		4.66	□□□□□ -1.66
TARDBP-208	ENST00000477447	TGM5	O43548	720 aa		4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	ZEB2	O60315	1214 aa		4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	BRINP1	O60477	761 aa		4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	CYP17A1	P05093	508 aa		4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	NCL	P19338	710 aa	Known RBP	4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	POU3F3	P20264	500 aa	Predicted RBP	4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	AFF3	P51826	1226 aa	Known RBP	4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	AMPD3	Q01432	767 aa		4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	STAT4	Q14765	748 aa		4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	RTP5	Q14D33	572 aa		4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	LHFPL2	Q6ZUX7	228 aa		4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	CILP2	Q8IUL8	1156 aa		4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	LINC00482	Q8N8I6	264 aa		4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	TACO1	Q9BSH4	297 aa	Known RBP	4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	IRF2BPL	Q9H1B7	796 aa		4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	PCDH12	Q9NPG4	1184 aa		4.65	□□□□□ -1.67
TARDBP-208	ENST00000477447	FBXO21	O94952	628 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	EYA4	O95677	639 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	MPIG6B	O95866	241 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	IBSP	P21815	317 aa	Predicted RBP	4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	CDKN1C	P49918	316 aa	Predicted RBP	4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	EPHA7	Q15375	998 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	DDB1	Q16531	1140 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	VMAC	Q2NL98	169 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	VWA3B	Q502W6	1294 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	CIAPIN1	Q6FI81	312 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	TRMT10B	Q6PF06	316 aa	Known RBP	4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	LRSAM1	Q6UWE0	723 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	SAPCD2	Q86UD0	394 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	ADGRG2	Q8IZP9	1017 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	STPG3	Q8N7X2	389 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	WDR66	Q8TBY9	1149 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	RTF1	Q92541	710 aa	Known RBP	4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	SLC5A5	Q92911	643 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	E2F7	Q96AV8	911 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	DACT3	Q96B18	629 aa	Predicted RBP	4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	SCYL1	Q96KG9	808 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	KRTAP4-12	Q9BQ66	201 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	MS4A5	Q9H3V2	200 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	ZMAT4	Q9H898	229 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	SPATA6	Q9NWH7	488 aa	Predicted RBP	4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	ATP8A1	Q9Y2Q0	1164 aa		4.64	□□□□□ -1.67
TARDBP-208	ENST00000477447	hCG_2014768	A0A024R1R8	64 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447		A0A1B0GTL3	188 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	UBA6	A0AVT1	1052 aa	Predicted RBP	4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	GOLGA6L22	H0YM25	854 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	GPR39	O43194	453 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	CYP7B1	O75881	506 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	IL18BP	O95998	194 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	CD40	P25942	277 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	SMAD3	P84022	425 aa	Known RBP	4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	SLC6A3	Q01959	620 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	DLX2	Q07687	328 aa	Predicted RBP	4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	TERF2	Q15554	542 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	SMAD2	Q15796	467 aa	Known RBP	4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	BROX	Q5VW32	411 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	TCERG1L	Q5VWI1	586 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	PRAMEF9	Q5VWM5	478 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	TTLL7	Q6ZT98	887 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	NME9	Q86XW9	330 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	SPATS2	Q86XZ4	545 aa	Known RBP	4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	TMEM151B	Q8IW70	566 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	ZZZ3	Q8IYH5	903 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	C7orf31	Q8N865	590 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	WDR48	Q8TAF3	677 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	CALML6	Q8TD86	181 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	ZNF526	Q8TF50	670 aa	Predicted RBP	4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	C16orf92	Q96LL3	132 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	FOXB1	Q99853	325 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	AMN	Q9BXJ7	453 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	GALNT8	Q9NY28	637 aa		4.63	□□□□□ -1.67
TARDBP-208	ENST00000477447	NTM	Q9P121	344 aa		4.63	□□□□□ -1.67

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