RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 POTEGQ6S5H5 508 aa18.11■□□□□ 0.49
TMEM53-208ENST00000476724 POTEEQ6S8J3 1075 aa18.11■□□□□ 0.49
TMEM53-208ENST00000476724 SAMD1Q6SPF0 538 aaPredicted RBP18.11■□□□□ 0.49
TMEM53-208ENST00000476724 DLK2Q6UY11 383 aa18.11■□□□□ 0.49
TMEM53-208ENST00000476724 CAGE1Q8TC20 777 aa18.11■□□□□ 0.49
TMEM53-208ENST00000476724 SMCR8Q8TEV9 937 aaPredicted RBP18.11■□□□□ 0.49
TMEM53-208ENST00000476724 FGFBP2Q9BYJ0 223 aa18.11■□□□□ 0.49
TMEM53-208ENST00000476724 FAM86B1E9PN63 330 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 OPLAHO14841 1288 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 SRGAP2O75044 1071 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 NOL4O94818 638 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 FAM86B2P0C5J1 330 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 TCP1P17987 556 aaKnown RBP18.1■□□□□ 0.49
TMEM53-208ENST00000476724 HGSNATQ68CP4 663 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 CCDC70Q6NSX1 233 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 FRMD5Q7Z6J6 570 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 ZKSCAN4Q969J2 545 aaPredicted RBP18.1■□□□□ 0.49
TMEM53-208ENST00000476724 SSC5DA1L4H1 1573 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 PDXKO00764 312 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 POLR3GO15318 223 aaPredicted RBP18.1■□□□□ 0.49
TMEM53-208ENST00000476724 MSH4O15457 936 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 CYP2C19P33261 490 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 ZNF76P36508 570 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 KNOP1Q1ED39 458 aaKnown RBP18.1■□□□□ 0.49
TMEM53-208ENST00000476724 C9orf131Q5VYM1 1079 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 CCDC174Q6PII3 467 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 ZNF572Q7Z3I7 529 aaPredicted RBP18.1■□□□□ 0.49
TMEM53-208ENST00000476724 CCDC155Q8N6L0 562 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 LSM14BQ9BX40 385 aaKnown RBP18.1■□□□□ 0.49
TMEM53-208ENST00000476724 ZHX3Q9H4I2 956 aa18.1■□□□□ 0.49
TMEM53-208ENST00000476724 CALUO43852 315 aaPredicted RBP18.09■□□□□ 0.49
TMEM53-208ENST00000476724 CACNB1Q02641 598 aaPredicted RBP18.09■□□□□ 0.49
TMEM53-208ENST00000476724 CASP8Q14790 479 aa18.09■□□□□ 0.49
TMEM53-208ENST00000476724 TDRD12Q587J7 1177 aaKnown RBP18.09■□□□□ 0.49
TMEM53-208ENST00000476724 EPM2AIP1Q7L775 607 aaPredicted RBP18.09■□□□□ 0.49
TMEM53-208ENST00000476724 RUBCNQ92622 972 aa18.09■□□□□ 0.49
TMEM53-208ENST00000476724 CAPZA3Q96KX2 299 aa18.09■□□□□ 0.49
TMEM53-208ENST00000476724 UIMC1Q96RL1 719 aa18.09■□□□□ 0.49
TMEM53-208ENST00000476724 VIPAS39Q9H9C1 493 aa18.09■□□□□ 0.49
TMEM53-208ENST00000476724 TSKSQ9UJT2 592 aa18.09■□□□□ 0.49
TMEM53-208ENST00000476724 VAV3Q9UKW4 847 aa18.09■□□□□ 0.49
TMEM53-208ENST00000476724 ZHX1Q9UKY1 873 aaPredicted RBP18.09■□□□□ 0.49
TMEM53-208ENST00000476724 EYA4O95677 639 aa18.08■□□□□ 0.49
TMEM53-208ENST00000476724 NR2F2P24468 414 aa18.08■□□□□ 0.49
TMEM53-208ENST00000476724 PABPC4Q13310 644 aaKnown RBP eCLIP18.08■□□□□ 0.49
TMEM53-208ENST00000476724 DCAF15Q66K64 600 aa18.08■□□□□ 0.49
TMEM53-208ENST00000476724 WRNIP1Q96S55 665 aa18.08■□□□□ 0.49
TMEM53-208ENST00000476724 RANBP17Q9H2T7 1088 aaKnown RBP18.08■□□□□ 0.49
TMEM53-208ENST00000476724 NLRC4Q9NPP4 1024 aa18.08■□□□□ 0.49
TMEM53-208ENST00000476724 AIPL1Q9NZN9 384 aa18.08■□□□□ 0.49
TMEM53-208ENST00000476724 ZNF112Q9UJU3 913 aa18.08■□□□□ 0.49
TMEM53-208ENST00000476724 CAPN6Q9Y6Q1 641 aa18.08■□□□□ 0.49
TMEM53-208ENST00000476724 MOCS3O95396 460 aa18.08■□□□□ 0.48
TMEM53-208ENST00000476724 ERCC3P19447 782 aa18.08■□□□□ 0.48
TMEM53-208ENST00000476724 RPL13P26373 211 aaKnown RBP18.08■□□□□ 0.48
TMEM53-208ENST00000476724 POLR2FP61218 127 aaKnown RBP18.08■□□□□ 0.48
TMEM53-208ENST00000476724 PSMC6P62333 389 aa18.08■□□□□ 0.48
TMEM53-208ENST00000476724 RAD51AP2Q09MP3 1159 aa18.08■□□□□ 0.48
TMEM53-208ENST00000476724 BMT2Q1RMZ1 405 aa18.08■□□□□ 0.48
TMEM53-208ENST00000476724 CHURC1Q8WUH1 139 aa18.08■□□□□ 0.48
TMEM53-208ENST00000476724 NOX5Q96PH1 765 aa18.08■□□□□ 0.48
TMEM53-208ENST00000476724 REEP2Q9BRK0 252 aa18.08■□□□□ 0.48
TMEM53-208ENST00000476724 TUFT1Q9NNX1 390 aa18.08■□□□□ 0.48
TMEM53-208ENST00000476724 HYOU1Q9Y4L1 999 aa18.08■□□□□ 0.48
TMEM53-208ENST00000476724 PHIPQ8WWQ0 1821 aa18.08■□□□□ 0.48
TMEM53-208ENST00000476724 GAP43P17677 238 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 KCNH2Q12809 1159 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 CREG2Q8IUH2 290 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 MMGT1Q8N4V1 131 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 KIAA1683Q9H0B3 1180 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 MLXIPQ9HAP2 919 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 METTL14Q9HCE5 456 aaKnown RBP18.07■□□□□ 0.48
TMEM53-208ENST00000476724 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.07■□□□□ 0.48
TMEM53-208ENST00000476724 ARMCX3Q9UH62 379 aaPredicted RBP18.07■□□□□ 0.48
TMEM53-208ENST00000476724 FEM1BQ9UK73 627 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 MYH10P35580 1976 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 CCDC66A2RUB6 948 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 MEIS1O00470 390 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 PLA2G6O60733 806 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 MUTP22033 750 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 GFPT1Q06210 699 aaPredicted RBP18.07■□□□□ 0.48
TMEM53-208ENST00000476724 MTMR2Q13614 643 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 PRKG1Q13976 671 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 FAM160B2Q86V87 743 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 SFR1Q86XK3 245 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 SCYL3Q8IZE3 742 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 TBC1D5Q92609 795 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 EIF2AK1Q9BQI3 630 aaKnown RBP18.07■□□□□ 0.48
TMEM53-208ENST00000476724 EHMT1Q9H9B1 1298 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 PLCB1Q9NQ66 1216 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 TYW1Q9NV66 732 aaKnown RBP18.07■□□□□ 0.48
TMEM53-208ENST00000476724 RABGAP1Q9Y3P9 1069 aa18.07■□□□□ 0.48
TMEM53-208ENST00000476724 ZNF185O15231 689 aa18.06■□□□□ 0.48
TMEM53-208ENST00000476724 TLR2O60603 784 aa18.06■□□□□ 0.48
TMEM53-208ENST00000476724 TBCAO75347 108 aaKnown RBP18.06■□□□□ 0.48
TMEM53-208ENST00000476724 HOXA13P31271 388 aaPredicted RBP18.06■□□□□ 0.48
TMEM53-208ENST00000476724 PDE11AQ9HCR9 933 aa18.06■□□□□ 0.48
TMEM53-208ENST00000476724 ZCCHC17Q9NP64 241 aaKnown RBP18.06■□□□□ 0.48
TMEM53-208ENST00000476724 OLFML3Q9NRN5 406 aa18.06■□□□□ 0.48
TMEM53-208ENST00000476724 ADARB2Q9NS39 739 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms