RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 NRBP2Q9NSY0 501 aa11.54□□□□□ -0.56
CCM2-208ENST00000476594 LIMCH1Q9UPQ0 1083 aa11.54□□□□□ -0.56
CCM2-208ENST00000476594 PCDHA2Q9Y5H9 948 aa11.54□□□□□ -0.56
CCM2-208ENST00000476594 SQORQ9Y6N5 450 aa11.54□□□□□ -0.56
CCM2-208ENST00000476594 CYP3A7-CYP3A51PA0A087WV96 503 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 SMIM35A0A1B0GVV1 85 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 MSH4O15457 936 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 DHX15O43143 795 aaKnown RBP11.53□□□□□ -0.56
CCM2-208ENST00000476594 GTPBP6O43824 516 aaPredicted RBP11.53□□□□□ -0.56
CCM2-208ENST00000476594 ST18O60284 1047 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 BAG4O95429 457 aaKnown RBP11.53□□□□□ -0.56
CCM2-208ENST00000476594 CCNE2O96020 404 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 CYP3A7P24462 503 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 TMOD1P28289 359 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 RABGGTBP53611 331 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 MRPS6P82932 125 aaKnown RBP11.53□□□□□ -0.56
CCM2-208ENST00000476594 HIC1Q14526 733 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 GRIN2CQ14957 1233 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 ME3Q16798 604 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 LETM2Q2VYF4 491 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 TRAF7Q6Q0C0 670 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 MIER3Q7Z3K6 550 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 CCDC60Q8IWA6 550 aaPredicted RBP11.53□□□□□ -0.56
CCM2-208ENST00000476594 MYOCDQ8IZQ8 938 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 MAFAQ8NHW3 353 aaPredicted RBP11.53□□□□□ -0.56
CCM2-208ENST00000476594 DNAJB3Q8WWF6 145 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 VWCEQ96DN2 955 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 RAD9AQ99638 391 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 FTHL17Q9BXU8 183 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 GABBR1Q9UBS5 961 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 DDX25Q9UHL0 483 aaKnown RBP11.53□□□□□ -0.56
CCM2-208ENST00000476594 KCNJ14Q9UNX9 436 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 KIF3AQ9Y496 699 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 TELO2Q9Y4R8 837 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 MAFBQ9Y5Q3 323 aaPredicted RBP11.53□□□□□ -0.56
CCM2-208ENST00000476594 TRPV2Q9Y5S1 764 aa11.53□□□□□ -0.56
CCM2-208ENST00000476594 M0R2N6 131 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 TBX3O15119 743 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 MAGEB2O15479 319 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 CHMP2AO43633 222 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 GJB5O95377 273 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 CA3P07451 260 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 HMGN5P82970 282 aaKnown RBP11.52□□□□□ -0.57
CCM2-208ENST00000476594 MBTPS1Q14703 1052 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 INF2Q27J81 1249 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 PPP4R3AQ6IN85 833 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 MTHFD1LQ6UB35 978 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 TSHZ1Q6ZSZ6 1077 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 FAM184AQ8NB25 1140 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 SLC5A5Q92911 643 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 LENG9Q96B70 501 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 FAM20AQ96MK3 541 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 AIFM3Q96NN9 605 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 MAP7D2Q96T17 732 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 LLPHQ9BRT6 129 aaKnown RBP11.52□□□□□ -0.57
CCM2-208ENST00000476594 FAM49AQ9H0Q0 323 aaPredicted RBP11.52□□□□□ -0.57
CCM2-208ENST00000476594 TSPYL2Q9H2G4 693 aaPredicted RBP11.52□□□□□ -0.57
CCM2-208ENST00000476594 PRDM12Q9H4Q4 367 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 YBX2Q9Y2T7 364 aaKnown RBP11.52□□□□□ -0.57
CCM2-208ENST00000476594 INSL6Q9Y581 213 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 CDY2AQ9Y6F7 541 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 IGSF9BQ9UPX0 1349 aa11.52□□□□□ -0.57
CCM2-208ENST00000476594 TET1Q8NFU7 2136 aa11.51□□□□□ -0.57
CCM2-208ENST00000476594 CCNT1O60563 726 aaKnown RBP11.51□□□□□ -0.57
CCM2-208ENST00000476594 TDP2O95551 362 aa11.51□□□□□ -0.57
CCM2-208ENST00000476594 OATP04181 439 aa11.51□□□□□ -0.57
CCM2-208ENST00000476594 GHRP10912 638 aa11.51□□□□□ -0.57
CCM2-208ENST00000476594 KLRC1P26715 233 aa11.51□□□□□ -0.57
CCM2-208ENST00000476594 DEFB103AP81534 67 aa11.51□□□□□ -0.57
CCM2-208ENST00000476594 PAK2Q13177 524 aa11.51□□□□□ -0.57
CCM2-208ENST00000476594 GNL2Q13823 731 aaKnown RBP11.51□□□□□ -0.57
CCM2-208ENST00000476594 GPNMBQ14956 572 aa11.51□□□□□ -0.57
CCM2-208ENST00000476594 RABEP1Q15276 862 aa11.51□□□□□ -0.57
CCM2-208ENST00000476594 C8orf34Q49A92 452 aa11.51□□□□□ -0.57
CCM2-208ENST00000476594 MARCH8Q5T0T0 291 aa11.51□□□□□ -0.57
CCM2-208ENST00000476594 RUFY4Q6ZNE9 571 aa11.51□□□□□ -0.57
CCM2-208ENST00000476594 PIK3AP1Q6ZUJ8 805 aa11.51□□□□□ -0.57
CCM2-208ENST00000476594 SLFN12Q8IYM2 578 aa11.51□□□□□ -0.57
CCM2-208ENST00000476594 NECAB1Q8N987 351 aa11.51□□□□□ -0.57
CCM2-208ENST00000476594 NSUN7Q8NE18 718 aaKnown RBP11.51□□□□□ -0.57
CCM2-208ENST00000476594 SAMD11Q96NU1 681 aa11.51□□□□□ -0.57
CCM2-208ENST00000476594 JPH2Q9BR39 696 aaPredicted RBP11.51□□□□□ -0.57
CCM2-208ENST00000476594 PSMD10O75832 226 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 CTDNEP1O95476 244 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 SEC24BO95487 1268 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 CHRNA1P02708 482 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 MMP1P03956 469 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 IGFBP4P22692 258 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 RBM25P49756 843 aaKnown RBP11.5□□□□□ -0.57
CCM2-208ENST00000476594 CDC42EP1Q00587 391 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 PRKCEQ02156 737 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 MGAT3Q09327 533 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 NPY5RQ15761 445 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 FBXO47Q5MNV8 452 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 EXOC8Q8IYI6 725 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 METTL13Q8N6R0 699 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 MBOAT7Q96N66 472 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 UIMC1Q96RL1 719 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 TGS1Q96RS0 853 aaKnown RBP11.5□□□□□ -0.57
CCM2-208ENST00000476594 YME1L1Q96TA2 773 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms