RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 ACADSP16219 412 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 CDC27P30260 824 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 ZNF76P36508 570 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 SARSP49591 514 aaKnown RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 ADARP55265 1226 aaKnown RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 BASP1P80723 227 aaKnown RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 FAM160A1Q05DH4 1040 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 TBL3Q12788 808 aaKnown RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 E2F2Q14209 437 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 INO80DQ53TQ3 878 aaPredicted RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 PLEKHG4Q58EX7 1191 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 BRDTQ58F21 947 aaPredicted RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 WDR45BQ5MNZ6 344 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 TMTC4Q5T4D3 741 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 DEPDC1Q5TB30 811 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 TRIM68Q6AZZ1 485 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 TWF2Q6IBS0 349 aaKnown RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 PHLDB2Q86SQ0 1253 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 GLYCTKQ8IVS8 523 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 CHPFQ8IZ52 775 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 ANKRD44Q8N8A2 993 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 NOA1Q8NC60 698 aaKnown RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 ATRIPQ8WXE1 791 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 GFM2Q969S9 779 aaKnown RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 ITPKCQ96DU7 683 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 C8orf76Q96K31 380 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 TCF7L2Q9NQB0 619 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 MRGBPQ9NV56 204 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 FANCLQ9NW38 375 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 ARHGEF38Q9NXL2 777 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 DACT1Q9NYF0 836 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 PDP2Q9P2J9 529 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 KIAA1257Q9ULG3 409 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 ZNF711Q9Y462 761 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 GJA3Q9Y6H8 435 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 PIK3C2GO75747 1445 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 NUP160Q12769 1436 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 A0A0B4J203 849 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 LOC105371267A0A1B0GV96 52 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 USP17L15C9J2P7 530 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 USP17L10C9JJH3 530 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 USP17L13C9JLJ4 530 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 USP17L12C9JPN9 530 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 USP17L11C9JVI0 530 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 USP17L21D6R901 530 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 USP17L18D6R9N7 530 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 USP17L22D6RA61 530 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 USP17L17D6RBQ6 530 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 USP17L19D6RCP7 530 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 USP17L20D6RJB6 530 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 SPTLC1O15269 473 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 ICMTO60725 284 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 RNASEH2AO75792 299 aaKnown RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 OXSR1O95747 527 aaPredicted RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 GNA14O95837 355 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 TKTP29401 623 aaKnown RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 CETN2P41208 172 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 PIK3CAP42336 1068 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 MXI1P50539 228 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 GPC3P51654 580 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 KRT85P78386 507 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 DNM1Q05193 864 aaKnown RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 USP17L24Q0WX57 530 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 SERINC3Q13530 473 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 KIF22Q14807 665 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 ADRM1Q16186 407 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 NDUFA5Q16718 116 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 SPRED3Q2MJR0 410 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 CNPY1Q3B7I2 92 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 C10orf76Q5T2E6 689 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 FOXB2Q5VYV0 432 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 PPP4R3AQ6IN85 833 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 FIP1L1Q6UN15 594 aaKnown RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 PNMA8AQ86V59 439 aaPredicted RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 ITPRIPQ8IWB1 547 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 CACNA2D3Q8IZS8 1091 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 SIX5Q8N196 739 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 CERKQ8TCT0 537 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 CCT6BQ92526 530 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 DPF3Q92784 378 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 RUNDC1Q96C34 613 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 ASIC4Q96FT7 647 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 SNF8Q96H20 258 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 UROC1Q96N76 676 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 PSKH2Q96QS6 385 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 SLF1Q9BQI6 1058 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 HGH1Q9BTY7 390 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 PDGFDQ9GZP0 370 aaPredicted RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 NSRP1Q9H0G5 558 aaKnown RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 PANK4Q9NVE7 773 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 FAIMQ9NVQ4 179 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 IL20Q9NYY1 176 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 NDUFA13Q9P0J0 144 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 CTTNBP2NLQ9P2B4 639 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 HSFX1Q9UBD0 423 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 SEC63Q9UGP8 760 aaKnown RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 RASAL2Q9UJF2 1139 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 HDAC9Q9UKV0 1011 aa4.5□□□□□ -1.69
CD55-208ENST00000476590 MRPS23Q9Y3D9 190 aaKnown RBP4.5□□□□□ -1.69
CD55-208ENST00000476590 FAM221BA6H8Z2 402 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms