RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 CNOT7Q9UIV1 285 aaKnown RBP15.02□□□□□ -0.01
HDAC1-206ENST00000476391 MYH4Q9Y623 1939 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 SIPA1L3O60292 1781 aaPredicted RBP15.01□□□□□ -0.01
HDAC1-206ENST00000476391 USP54Q70EL1 1684 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 ABCB11O95342 1321 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 MAGEA13PA6NCF6 341 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 BTNL10A8MVZ5 291 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 SMAPO00193 183 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 NVLO15381 856 aaKnown RBP15.01□□□□□ -0.01
HDAC1-206ENST00000476391 PRPF3O43395 683 aaKnown RBP15.01□□□□□ -0.01
HDAC1-206ENST00000476391 CEP104O60308 925 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 TRAPPC10P48553 1259 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 PPP2R5BQ15173 497 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 TDRD12Q587J7 1177 aaKnown RBP15.01□□□□□ -0.01
HDAC1-206ENST00000476391 TNFAIP8L3Q5GJ75 292 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 ARL6IP4Q66PJ3 421 aaKnown RBP15.01□□□□□ -0.01
HDAC1-206ENST00000476391 ANKRD40Q6AI12 368 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 INPP5DQ92835 1189 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 GBP5Q96PP8 586 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 IWS1Q96ST2 819 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 MTA3Q9BTC8 594 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 CCDC28BQ9BUN5 200 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 OCEL1Q9H607 264 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 DISC1Q9NRI5 854 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 STOML1Q9UBI4 398 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 AMACRQ9UHK6 382 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 KRIT1O00522 736 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 FOXO4P98177 505 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 MKRN3Q13064 507 aaKnown RBP15.01□□□□□ -0.01
HDAC1-206ENST00000476391 ACVR2BQ13705 512 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 FANCBQ8NB91 859 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 SLC17A8Q8NDX2 589 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 UCMAQ8WVF2 138 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 SLX1AQ9BQ83 275 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 AZI2Q9H6S1 392 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 DCLRE1BQ9H816 532 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 KLHL14Q9P2G3 628 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 CIDEBQ9UHD4 219 aa15.01□□□□□ -0.01
HDAC1-206ENST00000476391 NOC2LQ9Y3T9 749 aaKnown RBP15.01□□□□□ -0.01
HDAC1-206ENST00000476391 TCP11X1B4DZS4 312 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 SERPING1P05155 500 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 VHLP40337 213 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 PMS2P54278 862 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 CACNA2D1P54289 1103 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 IFI35P80217 286 aaPredicted RBP15□□□□□ -0.01
HDAC1-206ENST00000476391 TCIRG1Q13488 830 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 BICDL1Q6ZP65 573 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 FBXO41Q8TF61 875 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 TNFRSF25Q93038 417 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 SHISA4Q96DD7 197 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 DDX23Q9BUQ8 820 aaKnown RBP15□□□□□ -0.01
HDAC1-206ENST00000476391 AP1M1Q9BXS5 423 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 MARF1Q9Y4F3 1742 aaKnown RBP15□□□□□ -0.01
HDAC1-206ENST00000476391 TLDC2A0PJX2 215 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 SIGLEC16A6NMB1 481 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 TTI1O43156 1089 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 AFPP02771 609 aaKnown RBP15□□□□□ -0.01
HDAC1-206ENST00000476391 CCDC166P0CW27 439 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 MYL6BP14649 208 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 KCNA3P22001 575 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 OCRLQ01968 901 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 DEUP1Q05D60 604 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 WTAPQ15007 396 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 ALX1Q15699 326 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 SLC18A3Q16572 532 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 MAN2A1Q16706 1144 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 SH2D4BQ5SQS7 431 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 KIAA0825Q8IV33 1275 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 FAM13CQ8NE31 585 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 NLRP3Q96P20 1036 aa15□□□□□ -0.01
HDAC1-206ENST00000476391 IQCGQ9H095 443 aaKnown RBP15□□□□□ -0.01
HDAC1-206ENST00000476391 TJP3O95049 919 aa14.99□□□□□ -0.01
HDAC1-206ENST00000476391 GM2AP17900 193 aa14.99□□□□□ -0.01
HDAC1-206ENST00000476391 ADD2P35612 726 aa14.99□□□□□ -0.01
HDAC1-206ENST00000476391 ZAP70P43403 619 aa14.99□□□□□ -0.01
HDAC1-206ENST00000476391 SERPINB4P48594 390 aa14.99□□□□□ -0.01
HDAC1-206ENST00000476391 PABPC4Q13310 644 aaKnown RBP eCLIP14.99□□□□□ -0.013e-9■■□□□ 13.8
HDAC1-206ENST00000476391 RCN2Q14257 317 aa14.99□□□□□ -0.01
HDAC1-206ENST00000476391 ZRSR2Q15696 482 aaKnown RBP14.99□□□□□ -0.01
HDAC1-206ENST00000476391 IL17AQ16552 155 aa14.99□□□□□ -0.01
HDAC1-206ENST00000476391 C1orf141Q5JVX7 400 aa14.99□□□□□ -0.01
HDAC1-206ENST00000476391 CMTR1Q8N1G2 835 aaKnown RBP14.99□□□□□ -0.01
HDAC1-206ENST00000476391 RASGEF1CQ8N431 466 aa14.99□□□□□ -0.01
HDAC1-206ENST00000476391 GATA6Q92908 595 aa14.99□□□□□ -0.01
HDAC1-206ENST00000476391 HAPLN3Q96S86 360 aa14.99□□□□□ -0.01
HDAC1-206ENST00000476391 NAP1L3Q99457 506 aaPredicted RBP14.99□□□□□ -0.01
HDAC1-206ENST00000476391 NMRK1Q9NWW6 199 aa14.99□□□□□ -0.01
HDAC1-206ENST00000476391 AIPL1Q9NZN9 384 aa14.99□□□□□ -0.01
HDAC1-206ENST00000476391 USP20Q9Y2K6 914 aa14.99□□□□□ -0.01
HDAC1-206ENST00000476391 ECE2O60344 883 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 LRRC24Q50LG9 513 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 NAALADL2Q58DX5 795 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 ZNF365Q70YC5 407 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 EEF2KMTQ96G04 330 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 DPH5Q9H2P9 285 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 KBTBD4Q9NVX7 518 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 COMMD3-BMI1R4GMX3 469 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 TMCC1O94876 653 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 FAM200BP0CF97 657 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 KPNB1Q14974 876 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms