RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 HYAL1Q12794 435 aa14.98□□□□□ -0.01
MRPL55-228ENST00000476267 RTN1Q16799 776 aa14.98□□□□□ -0.01
MRPL55-228ENST00000476267 DHX32Q7L7V1 743 aaKnown RBP14.98□□□□□ -0.01
MRPL55-228ENST00000476267 FAM49AQ9H0Q0 323 aaPredicted RBP14.98□□□□□ -0.01
MRPL55-228ENST00000476267 TMEM260Q9NX78 707 aa14.98□□□□□ -0.01
MRPL55-228ENST00000476267 BARHL2Q9NY43 387 aa14.98□□□□□ -0.01
MRPL55-228ENST00000476267 PADI3Q9ULW8 664 aa14.98□□□□□ -0.01
MRPL55-228ENST00000476267 TRPV2Q9Y5S1 764 aa14.98□□□□□ -0.01
MRPL55-228ENST00000476267 NID2Q14112 1375 aa14.98□□□□□ -0.01
MRPL55-228ENST00000476267 IGLV3-22A0A075B6J6 115 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 SMIM35A0A1B0GVV1 85 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 FAM86C2PA6NEL3 165 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 C19orf67A6NJJ6 358 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 DHX15O43143 795 aaKnown RBP14.97□□□□□ -0.01
MRPL55-228ENST00000476267 ZBTB43O43298 467 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 STAT5BP51692 787 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 ADCY7P51828 1080 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 RCAN1P53805 252 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 ZP2Q05996 745 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 TMEM62Q0P6H9 643 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 AP3B2Q13367 1082 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 BTG3Q14201 252 aaPredicted RBP14.97□□□□□ -0.01
MRPL55-228ENST00000476267 RNF20Q5VTR2 975 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 IER5Q5VY09 327 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 ABHD15Q6UXT9 468 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 NIPA1Q7RTP0 329 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 P2RX5Q93086 422 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 SDF4Q9BRK5 362 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 PLVAPQ9BX97 442 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 FTHL17Q9BXU8 183 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 CELF4Q9BZC1 486 aaKnown RBP14.97□□□□□ -0.01
MRPL55-228ENST00000476267 TMX1Q9H3N1 280 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 AZI2Q9H6S1 392 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 TRPC6Q9Y210 931 aa14.97□□□□□ -0.01
MRPL55-228ENST00000476267 MRPL42Q9Y6G3 142 aaKnown RBP14.97□□□□□ -0.01
MRPL55-228ENST00000476267 V9GY48 417 aaPredicted RBP14.97□□□□□ -0.01
MRPL55-228ENST00000476267 FNDC1Q4ZHG4 1894 aaPredicted RBP14.97□□□□□ -0.01
MRPL55-228ENST00000476267 SMCO2A6NFE2 343 aa14.96□□□□□ -0.01
MRPL55-228ENST00000476267 ZBTB42B2RXF5 422 aa14.96□□□□□ -0.01
MRPL55-228ENST00000476267 FAM86B1E9PN63 330 aa14.96□□□□□ -0.01
MRPL55-228ENST00000476267 ADAMTS3O15072 1205 aa14.96□□□□□ -0.01
MRPL55-228ENST00000476267 FAM86B2P0C5J1 330 aa14.96□□□□□ -0.01
MRPL55-228ENST00000476267 SLC26A2P50443 739 aa14.96□□□□□ -0.01
MRPL55-228ENST00000476267 DLX2Q07687 328 aaPredicted RBP14.96□□□□□ -0.01
MRPL55-228ENST00000476267 MTHFD1LQ6UB35 978 aa14.96□□□□□ -0.01
MRPL55-228ENST00000476267 SYNE3Q6ZMZ3 975 aa14.96□□□□□ -0.01
MRPL55-228ENST00000476267 NPAS4Q8IUM7 802 aa14.96□□□□□ -0.01
MRPL55-228ENST00000476267 CCDC60Q8IWA6 550 aaPredicted RBP14.96□□□□□ -0.01
MRPL55-228ENST00000476267 CMTR2Q8IYT2 770 aaKnown RBP14.96□□□□□ -0.01
MRPL55-228ENST00000476267 FAM122AQ96E09 287 aa14.96□□□□□ -0.01
MRPL55-228ENST00000476267 CLDND1Q9NY35 253 aa14.96□□□□□ -0.01
MRPL55-228ENST00000476267 PRKAG3Q9UGI9 489 aa14.96□□□□□ -0.01
MRPL55-228ENST00000476267 PLAGL2Q9UPG8 496 aa14.96□□□□□ -0.01
MRPL55-228ENST00000476267 KLF18A0A0U1RQI7 1052 aa14.95□□□□□ -0.02
MRPL55-228ENST00000476267 GOLGA8AA7E2F4 631 aa14.95□□□□□ -0.02
MRPL55-228ENST00000476267 GOLGA8BA8MQT2 603 aa14.95□□□□□ -0.02
MRPL55-228ENST00000476267 PRR33A8MZF0 331 aa14.95□□□□□ -0.02
MRPL55-228ENST00000476267 NCK2O43639 380 aa14.95□□□□□ -0.02
MRPL55-228ENST00000476267 TBX10O75333 385 aa14.95□□□□□ -0.02
MRPL55-228ENST00000476267 CYP3A4P08684 503 aa14.95□□□□□ -0.02
MRPL55-228ENST00000476267 ATP4AP20648 1035 aa14.95□□□□□ -0.02
MRPL55-228ENST00000476267 DNAJB1P25685 340 aa14.95□□□□□ -0.02
MRPL55-228ENST00000476267 HOXD11P31277 338 aaPredicted RBP14.95□□□□□ -0.02
MRPL55-228ENST00000476267 GTF2F1P35269 517 aaKnown RBP eCLIP14.95□□□□□ -0.02
MRPL55-228ENST00000476267 SMAD2Q15796 467 aaKnown RBP14.95□□□□□ -0.02
MRPL55-228ENST00000476267 NME8Q8N427 588 aa14.95□□□□□ -0.02
MRPL55-228ENST00000476267 KCNB2Q92953 911 aa14.95□□□□□ -0.02
MRPL55-228ENST00000476267 TNPO1Q92973 898 aaKnown RBP14.95□□□□□ -0.02
MRPL55-228ENST00000476267 WDR81Q562E7 1941 aa14.95□□□□□ -0.02
MRPL55-228ENST00000476267 COL1A2P08123 1366 aa14.95□□□□□ -0.02
MRPL55-228ENST00000476267 ESYT2A0FGR8 921 aa14.94□□□□□ -0.02
MRPL55-228ENST00000476267 MGEA5O60502 916 aa14.94□□□□□ -0.02
MRPL55-228ENST00000476267 ITGB1P05556 798 aa14.94□□□□□ -0.02
MRPL55-228ENST00000476267 SCG2P13521 617 aa14.94□□□□□ -0.02
MRPL55-228ENST00000476267 PAK2Q13177 524 aa14.94□□□□□ -0.02
MRPL55-228ENST00000476267 PFKFB3Q16875 520 aaPredicted RBP14.94□□□□□ -0.02
MRPL55-228ENST00000476267 NAALADL2Q58DX5 795 aa14.94□□□□□ -0.02
MRPL55-228ENST00000476267 ADHFE1Q8IWW8 467 aa14.94□□□□□ -0.02
MRPL55-228ENST00000476267 KIAA0319LQ8IZA0 1049 aa14.94□□□□□ -0.02
MRPL55-228ENST00000476267 ATP8B4Q8TF62 1192 aa14.94□□□□□ -0.02
MRPL55-228ENST00000476267 TMEM40Q8WWA1 233 aa14.94□□□□□ -0.02
MRPL55-228ENST00000476267 GLT8D2Q9H1C3 349 aa14.94□□□□□ -0.02
MRPL55-228ENST00000476267 CDHR5Q9HBB8 845 aa14.94□□□□□ -0.02
MRPL55-228ENST00000476267 ERVK-5Q9HDB9 667 aa14.94□□□□□ -0.02
MRPL55-228ENST00000476267 ALG13Q9NP73 1137 aaKnown RBP14.94□□□□□ -0.02
MRPL55-228ENST00000476267 HCN4Q9Y3Q4 1203 aa14.94□□□□□ -0.02
MRPL55-228ENST00000476267 M0QZ92 97 aa14.93□□□□□ -0.02
MRPL55-228ENST00000476267 LINC01565O15544 149 aa14.93□□□□□ -0.02
MRPL55-228ENST00000476267 MBTPS2O43462 519 aa14.93□□□□□ -0.02
MRPL55-228ENST00000476267 HBP1O60381 514 aa14.93□□□□□ -0.02
MRPL55-228ENST00000476267 KLRC1P26715 233 aa14.93□□□□□ -0.02
MRPL55-228ENST00000476267 SSTR3P32745 418 aaPredicted RBP14.93□□□□□ -0.02
MRPL55-228ENST00000476267 ADD1P35611 737 aaKnown RBP14.93□□□□□ -0.02
MRPL55-228ENST00000476267 GATMP50440 423 aa14.93□□□□□ -0.02
MRPL55-228ENST00000476267 KRT76Q01546 638 aa14.93□□□□□ -0.02
MRPL55-228ENST00000476267 ADAM15Q13444 863 aa14.93□□□□□ -0.02
MRPL55-228ENST00000476267 PKN1Q16512 942 aa14.93□□□□□ -0.02
MRPL55-228ENST00000476267 TMEM266Q2M3C6 531 aa14.93□□□□□ -0.02
MRPL55-228ENST00000476267 FAM43BQ6ZT52 329 aaPredicted RBP14.93□□□□□ -0.02
MRPL55-228ENST00000476267 SPPL3Q8TCT6 385 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms