RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 POTEBQ6S5H4 581 aa9.59□□□□□ -0.87
SATB1-213ENST00000476178 TSHZ1Q6ZSZ6 1077 aa9.59□□□□□ -0.87
SATB1-213ENST00000476178 PLPPR4Q7Z2D5 763 aa9.59□□□□□ -0.87
SATB1-213ENST00000476178 PLA2G4DQ86XP0 818 aa9.59□□□□□ -0.87
SATB1-213ENST00000476178 TRAPPC12Q8WVT3 735 aa9.59□□□□□ -0.87
SATB1-213ENST00000476178 UIMC1Q96RL1 719 aa9.59□□□□□ -0.87
SATB1-213ENST00000476178 PCYT2Q99447 389 aa9.59□□□□□ -0.87
SATB1-213ENST00000476178 EPHX3Q9H6B9 360 aa9.59□□□□□ -0.87
SATB1-213ENST00000476178 AGO4Q9HCK5 861 aaKnown RBP9.59□□□□□ -0.87
SATB1-213ENST00000476178 TCEAL9Q9UHQ7 104 aa9.59□□□□□ -0.87
SATB1-213ENST00000476178 RAPGEFL1Q9UHV5 662 aa9.59□□□□□ -0.87
SATB1-213ENST00000476178 GINS2Q9Y248 185 aa9.59□□□□□ -0.87
SATB1-213ENST00000476178 RWDD3Q9Y3V2 267 aa9.59□□□□□ -0.87
SATB1-213ENST00000476178 BRWD1Q9NSI6 2320 aa9.59□□□□□ -0.87
SATB1-213ENST00000476178 NFASCO94856 1347 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 MICAL3Q7RTP6 2002 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 FAM86B1E9PN63 330 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 H3BQ06 376 aaPredicted RBP9.58□□□□□ -0.88
SATB1-213ENST00000476178 EDIL3O43854 480 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 CSPG5O95196 566 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 ATG7O95352 703 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 RB1P06400 928 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 CYP3A4P08684 503 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 FAM86B2P0C5J1 330 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 BMPR1AP36894 532 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 MGAT3Q09327 533 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 PAK2Q13177 524 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 LEXMQ3ZCV2 418 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 TCEAL5Q5H9L2 206 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 PTCRAQ6ISU1 281 aaPredicted RBP9.58□□□□□ -0.88
SATB1-213ENST00000476178 MTHFD1LQ6UB35 978 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 TRMT1LQ7Z2T5 733 aaKnown RBP9.58□□□□□ -0.88
SATB1-213ENST00000476178 CKAP2LQ8IYA6 745 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 NME8Q8N427 588 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 ZNF274Q96GC6 653 aaPredicted RBP9.58□□□□□ -0.88
SATB1-213ENST00000476178 LARP6Q9BRS8 491 aaKnown RBP9.58□□□□□ -0.88
SATB1-213ENST00000476178 C11orf84Q9BUA3 381 aaPredicted RBP9.58□□□□□ -0.88
SATB1-213ENST00000476178 FTHL17Q9BXU8 183 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 RNF26Q9BY78 433 aaPredicted RBP9.58□□□□□ -0.88
SATB1-213ENST00000476178 CELF4Q9BZC1 486 aaKnown RBP9.58□□□□□ -0.88
SATB1-213ENST00000476178 UPF3BQ9BZI7 483 aaKnown RBP9.58□□□□□ -0.88
SATB1-213ENST00000476178 NSUN3Q9H649 340 aaKnown RBP9.58□□□□□ -0.88
SATB1-213ENST00000476178 AGO3Q9H9G7 860 aaKnown RBP9.58□□□□□ -0.88
SATB1-213ENST00000476178 NCOA5Q9HCD5 579 aaKnown RBP9.58□□□□□ -0.88
SATB1-213ENST00000476178 C6orf50Q9HD87 102 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 LRFN2Q9ULH4 789 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 PCDHA2Q9Y5H9 948 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 TRPV2Q9Y5S1 764 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 CYP46A1Q9Y6A2 500 aa9.58□□□□□ -0.88
SATB1-213ENST00000476178 CHD7Q9P2D1 2997 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 IGLV3-22A0A075B6J6 115 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 IGKV6D-21A0A0A0MT36 114 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 DHX15O43143 795 aaKnown RBP9.57□□□□□ -0.88
SATB1-213ENST00000476178 STAG3L1P0CL83 205 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 KLRC1P26715 233 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 SLC26A2P50443 739 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 KRT76Q01546 638 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 NFX1Q12986 1120 aaKnown RBP9.57□□□□□ -0.88
SATB1-213ENST00000476178 PUS10Q3MIT2 529 aaKnown RBP9.57□□□□□ -0.88
SATB1-213ENST00000476178 MCTP2Q6DN12 878 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 SWSAP1Q6NVH7 229 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 MIS18BP1Q6P0N0 1132 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 PDXDC2PQ6P474 469 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 NIPA1Q7RTP0 329 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.57□□□□□ -0.88
SATB1-213ENST00000476178 CCDC12Q8WUD4 166 aaPredicted RBP9.57□□□□□ -0.88
SATB1-213ENST00000476178 ZNF577Q9BSK1 485 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 SLC26A6Q9BXS9 759 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 IGFLR1Q9H665 355 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 ZNF302Q9NR11 478 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 CLDND1Q9NY35 253 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 PADI3Q9ULW8 664 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 FAM50BQ9Y247 325 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 EYSQ5T1H1 3165 aa9.57□□□□□ -0.88
SATB1-213ENST00000476178 ADGRA3Q8IWK6 1321 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 COL4A4P53420 1690 aaPredicted RBP9.56□□□□□ -0.88
SATB1-213ENST00000476178 SMIM35A0A1B0GVV1 85 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 IPO5O00410 1097 aaKnown RBP9.56□□□□□ -0.88
SATB1-213ENST00000476178 GRM6O15303 877 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 NCK2O43639 380 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 HBP1O60381 514 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 DGKIO75912 1065 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 CCNE2O96020 404 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 GNA11P29992 359 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 TMEM266Q2M3C6 531 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 PAN2Q504Q3 1202 aaKnown RBP9.56□□□□□ -0.88
SATB1-213ENST00000476178 TMEM31Q5JXX7 168 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 ABHD15Q6UXT9 468 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 RTN4RL1Q86UN2 441 aaPredicted RBP9.56□□□□□ -0.88
SATB1-213ENST00000476178 NPAS4Q8IUM7 802 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 FAM178BQ8IXR5 827 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 GJD3Q8N144 294 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 REXO1Q8N1G1 1221 aaKnown RBP9.56□□□□□ -0.88
SATB1-213ENST00000476178 RASGRP4Q8TDF6 673 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 ATP8B4Q8TF62 1192 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 PABPC5Q96DU9 382 aaKnown RBP9.56□□□□□ -0.88
SATB1-213ENST00000476178 LMAN2LQ9H0V9 348 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 ALG13Q9NP73 1137 aaKnown RBP9.56□□□□□ -0.88
SATB1-213ENST00000476178 SH3GLB2Q9NR46 395 aa9.56□□□□□ -0.88
SATB1-213ENST00000476178 TBC1D22BQ9NU19 505 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms