RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 TMTC3Q6ZXV5 915 aa17.99■□□□□ 0.47
CDPF1-206ENST00000475605 NPAS4Q8IUM7 802 aa17.99■□□□□ 0.47
CDPF1-206ENST00000475605 CMTR2Q8IYT2 770 aaKnown RBP17.99■□□□□ 0.47
CDPF1-206ENST00000475605 TMTC2Q8N394 836 aa17.99■□□□□ 0.47
CDPF1-206ENST00000475605 KLHL23Q8NBE8 558 aa17.99■□□□□ 0.47
CDPF1-206ENST00000475605 P2RX5Q93086 422 aa17.99■□□□□ 0.47
CDPF1-206ENST00000475605 FBXL18Q96ME1 805 aa17.99■□□□□ 0.47
CDPF1-206ENST00000475605 MXRA8Q9BRK3 442 aa17.99■□□□□ 0.47
CDPF1-206ENST00000475605 LSG1Q9H089 658 aaKnown RBP17.99■□□□□ 0.47
CDPF1-206ENST00000475605 CD207Q9UJ71 328 aa17.99■□□□□ 0.47
CDPF1-206ENST00000475605 PCDHGC5Q9Y5F6 944 aa17.99■□□□□ 0.47
CDPF1-206ENST00000475605 STXBP3O00186 592 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 SLC27A2O14975 620 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 CDC45O75419 566 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 CALM1P0DP23 149 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 CALM2P0DP24 149 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 CALM3P0DP25 149 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 NDUFV1P49821 464 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 ACTR2P61160 394 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 TMEM266Q2M3C6 531 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 TYW1BQ6NUM6 668 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 RNF135Q8IUD6 432 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 FANCBQ8NB91 859 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 POF1BQ8WVV4 589 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 MSLNLQ96KJ4 702 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 FTHL17Q9BXU8 183 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 CELF4Q9BZC1 486 aaKnown RBP17.98■□□□□ 0.47
CDPF1-206ENST00000475605 UPF3BQ9BZI7 483 aaKnown RBP17.98■□□□□ 0.47
CDPF1-206ENST00000475605 TMX1Q9H3N1 280 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 AZI2Q9H6S1 392 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 CLEC1BQ9P126 229 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 PCDHA2Q9Y5H9 948 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 SLC12A7Q9Y666 1083 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 SQORQ9Y6N5 450 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 IGSF9BQ9UPX0 1349 aa17.98■□□□□ 0.47
CDPF1-206ENST00000475605 STAT5BP51692 787 aa17.97■□□□□ 0.47
CDPF1-206ENST00000475605 NHLH1Q02575 133 aa17.97■□□□□ 0.47
CDPF1-206ENST00000475605 PAK2Q13177 524 aa17.97■□□□□ 0.47
CDPF1-206ENST00000475605 ITGB3BPQ13352 177 aaPredicted RBP17.97■□□□□ 0.47
CDPF1-206ENST00000475605 WWC2Q6AWC2 1192 aa17.97■□□□□ 0.47
CDPF1-206ENST00000475605 RBM23Q86U06 439 aaKnown RBP17.97■□□□□ 0.47
CDPF1-206ENST00000475605 MICU3Q86XE3 530 aa17.97■□□□□ 0.47
CDPF1-206ENST00000475605 C5orf42Q9H799 3197 aa17.96■□□□□ 0.47
CDPF1-206ENST00000475605 M0QZ92 97 aa17.96■□□□□ 0.47
CDPF1-206ENST00000475605 PPFIA3O75145 1194 aa17.96■□□□□ 0.47
CDPF1-206ENST00000475605 SCG2P13521 617 aa17.96■□□□□ 0.47
CDPF1-206ENST00000475605 NRIP1P48552 1158 aa17.96■□□□□ 0.47
CDPF1-206ENST00000475605 MRE11P49959 708 aa17.96■□□□□ 0.47
CDPF1-206ENST00000475605 NAALADL2Q58DX5 795 aa17.96■□□□□ 0.47
CDPF1-206ENST00000475605 HERC4Q5GLZ8 1057 aaPredicted RBP17.96■□□□□ 0.47
CDPF1-206ENST00000475605 CREB3L3Q68CJ9 461 aa17.96■□□□□ 0.47
CDPF1-206ENST00000475605 MTHFD1LQ6UB35 978 aa17.96■□□□□ 0.47
CDPF1-206ENST00000475605 PLPPR4Q7Z2D5 763 aa17.96■□□□□ 0.47
CDPF1-206ENST00000475605 POP1Q99575 1024 aaKnown RBP17.96■□□□□ 0.47
CDPF1-206ENST00000475605 SDF4Q9BRK5 362 aa17.96■□□□□ 0.47
CDPF1-206ENST00000475605 ESYT1Q9BSJ8 1104 aa17.96■□□□□ 0.47
CDPF1-206ENST00000475605 CDHR5Q9HBB8 845 aa17.96■□□□□ 0.47
CDPF1-206ENST00000475605 NFASCO94856 1347 aa17.96■□□□□ 0.46
CDPF1-206ENST00000475605 PLXNA4Q9HCM2 1894 aa17.95■□□□□ 0.46
CDPF1-206ENST00000475605 SMIM35A0A1B0GVV1 85 aa17.95■□□□□ 0.46
CDPF1-206ENST00000475605 MGEA5O60502 916 aa17.95■□□□□ 0.46
CDPF1-206ENST00000475605 EYA4O95677 639 aa17.95■□□□□ 0.46
CDPF1-206ENST00000475605 RPLP2P05387 115 aaKnown RBP17.95■□□□□ 0.46
CDPF1-206ENST00000475605 STAG3L1P0CL83 205 aa17.95■□□□□ 0.46
CDPF1-206ENST00000475605 KRT76Q01546 638 aa17.95■□□□□ 0.46
CDPF1-206ENST00000475605 NFX1Q12986 1120 aaKnown RBP17.95■□□□□ 0.46
CDPF1-206ENST00000475605 EFHBQ8N7U6 833 aa17.95■□□□□ 0.46
CDPF1-206ENST00000475605 AGO4Q9HCK5 861 aaKnown RBP17.95■□□□□ 0.46
CDPF1-206ENST00000475605 TMEM260Q9NX78 707 aa17.95■□□□□ 0.46
CDPF1-206ENST00000475605 LRFN2Q9ULH4 789 aa17.95■□□□□ 0.46
CDPF1-206ENST00000475605 GINS2Q9Y248 185 aa17.95■□□□□ 0.46
CDPF1-206ENST00000475605 CNTNAP5Q8WYK1 1306 aa17.95■□□□□ 0.46
CDPF1-206ENST00000475605 KDM3AQ9Y4C1 1321 aa17.95■□□□□ 0.46
CDPF1-206ENST00000475605 PIEZO1Q92508 2521 aa17.95■□□□□ 0.46
CDPF1-206ENST00000475605 DDX39AO00148 427 aaKnown RBP17.94■□□□□ 0.46
CDPF1-206ENST00000475605 ATG7O95352 703 aa17.94■□□□□ 0.46
CDPF1-206ENST00000475605 GLP2RO95838 553 aa17.94■□□□□ 0.46
CDPF1-206ENST00000475605 CCNE2O96020 404 aa17.94■□□□□ 0.46
CDPF1-206ENST00000475605 KLRC1P26715 233 aa17.94■□□□□ 0.46
CDPF1-206ENST00000475605 NAPAP54920 295 aa17.94■□□□□ 0.46
CDPF1-206ENST00000475605 RBM10P98175 930 aaKnown RBP17.94■□□□□ 0.46
CDPF1-206ENST00000475605 NECTIN1Q15223 517 aa17.94■□□□□ 0.46
CDPF1-206ENST00000475605 CEP55Q53EZ4 464 aa17.94■□□□□ 0.46
CDPF1-206ENST00000475605 TMEM40Q8WWA1 233 aa17.94■□□□□ 0.46
CDPF1-206ENST00000475605 ANO3Q9BYT9 981 aa17.94■□□□□ 0.46
CDPF1-206ENST00000475605 RIC8AQ9NPQ8 531 aa17.94■□□□□ 0.46
CDPF1-206ENST00000475605 ANO2Q9NQ90 1003 aa17.94■□□□□ 0.46
CDPF1-206ENST00000475605 HCSTQ9UBK5 93 aa17.94■□□□□ 0.46
CDPF1-206ENST00000475605 BARX2Q9UMQ3 279 aaPredicted RBP17.94■□□□□ 0.46
CDPF1-206ENST00000475605 NOC2LQ9Y3T9 749 aaKnown RBP17.94■□□□□ 0.46
CDPF1-206ENST00000475605 TECTAO75443 2155 aa17.94■□□□□ 0.46
CDPF1-206ENST00000475605 ZNF318Q5VUA4 2279 aa17.93■□□□□ 0.46
CDPF1-206ENST00000475605 MEIS1O00470 390 aa17.93■□□□□ 0.46
CDPF1-206ENST00000475605 PER2O15055 1255 aa17.93■□□□□ 0.46
CDPF1-206ENST00000475605 SARSP49591 514 aaKnown RBP17.93■□□□□ 0.46
CDPF1-206ENST00000475605 SGMS1Q86VZ5 419 aa17.93■□□□□ 0.46
CDPF1-206ENST00000475605 NME8Q8N427 588 aa17.93■□□□□ 0.46
CDPF1-206ENST00000475605 SMRP1Q8NCR6 262 aa17.93■□□□□ 0.46
CDPF1-206ENST00000475605 EDAQ92838 391 aa17.93■□□□□ 0.46
CDPF1-206ENST00000475605 TNPO1Q92973 898 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms