RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 PHKBQ93100 1093 aa8.01□□□□□ -1.13
HDAC3-207ENST00000475549 LENG9Q96B70 501 aa8.01□□□□□ -1.13
HDAC3-207ENST00000475549 MRPL38Q96DV4 380 aaKnown RBP8.01□□□□□ -1.13
HDAC3-207ENST00000475549 TRIP12Q14669 1992 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-207ENST00000475549 MYO9BQ13459 2157 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 PTPRSQ13332 1948 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 ESYT2A0FGR8 921 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 RRN3P2A6NIE6 340 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 C5orf67F2Z3F1 127 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 hCG_1984214I3L0E3 225 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 GRM6O15303 877 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 DGKIO75912 1065 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 COL9A1P20849 921 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 KCNA5P22460 613 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 RPS6KB1P23443 525 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 KLRC1P26715 233 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 PDIA3P30101 505 aaKnown RBP8□□□□□ -1.13
HDAC3-207ENST00000475549 LTBRP36941 435 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 TMEM266Q2M3C6 531 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 LEXMQ3ZCV2 418 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 TCEAL5Q5H9L2 206 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 IER5Q5VY09 327 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 SWSAP1Q6NVH7 229 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 TSHZ1Q6ZSZ6 1077 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 NIPA1Q7RTP0 329 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 RSPH3Q86UC2 560 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 PLA2G4DQ86XP0 818 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 CCDC60Q8IWA6 550 aaPredicted RBP8□□□□□ -1.13
HDAC3-207ENST00000475549 ZNF713Q8N859 430 aaPredicted RBP8□□□□□ -1.13
HDAC3-207ENST00000475549 NEK9Q8TD19 979 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 RASGRP4Q8TDF6 673 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 TMEM40Q8WWA1 233 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 CLP1Q92989 425 aaKnown RBP8□□□□□ -1.13
HDAC3-207ENST00000475549 SDF4Q9BRK5 362 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 LARP6Q9BRS8 491 aaKnown RBP8□□□□□ -1.13
HDAC3-207ENST00000475549 CELF4Q9BZC1 486 aaKnown RBP8□□□□□ -1.13
HDAC3-207ENST00000475549 AZI2Q9H6S1 392 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 UBE2ZQ9H832 354 aaPredicted RBP8□□□□□ -1.13
HDAC3-207ENST00000475549 NCOA5Q9HCD5 579 aaKnown RBP8□□□□□ -1.13
HDAC3-207ENST00000475549 C11orf16Q9NQ32 467 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 PADI3Q9ULW8 664 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 TRPC6Q9Y210 931 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 MAFBQ9Y5Q3 323 aaPredicted RBP8□□□□□ -1.13
HDAC3-207ENST00000475549 SQORQ9Y6N5 450 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 IGSF9BQ9UPX0 1349 aa8□□□□□ -1.13
HDAC3-207ENST00000475549 SMIM35A0A1B0GVV1 85 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 H3BQ06 376 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-207ENST00000475549 IPO5O00410 1097 aaKnown RBP7.99□□□□□ -1.13
HDAC3-207ENST00000475549 MGEA5O60502 916 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 IL9P15248 144 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 DNAJB1P25685 340 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 CIITAP33076 1130 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 GTF2F1P35269 517 aaKnown RBP eCLIP7.99□□□□□ -1.13
HDAC3-207ENST00000475549 ZNF76P36508 570 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 GATMP50440 423 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 TOB2Q14106 344 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-207ENST00000475549 BLOC1S2Q6QNY1 142 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 FIBCD1Q8N539 461 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 BANK1Q8NDB2 785 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 IL27Q8NEV9 243 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 ATP8B4Q8TF62 1192 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 GJA10Q969M2 543 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 SAMD11Q96NU1 681 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 ZNF577Q9BSK1 485 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 GLT8D2Q9H1C3 349 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 ZSWIM6Q9HCJ5 1215 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 ALG13Q9NP73 1137 aaKnown RBP7.99□□□□□ -1.13
HDAC3-207ENST00000475549 NAP1L2Q9ULW6 460 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-207ENST00000475549 PLAGL2Q9UPG8 496 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 NOC2LQ9Y3T9 749 aaKnown RBP7.99□□□□□ -1.13
HDAC3-207ENST00000475549 TRPV2Q9Y5S1 764 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 KDM3AQ9Y4C1 1321 aa7.99□□□□□ -1.13
HDAC3-207ENST00000475549 NID2Q14112 1375 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 CCDC196A0A1B0GTZ2 297 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 GRXCR2A6NFK2 248 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 M0R2N6 131 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 BACH1O14867 736 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 MSH4O15457 936 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 HBP1O60381 514 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 GPR32O75388 356 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 C22orf31O95567 290 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 IFNAR1P17181 557 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 SLC26A2P50443 739 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 CCT2P78371 535 aaKnown RBP7.98□□□□□ -1.13
HDAC3-207ENST00000475549 FGD1P98174 961 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 KRT76Q01546 638 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 DLX2Q07687 328 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-207ENST00000475549 NPY5RQ15761 445 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 CTC1Q2NKJ3 1217 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 PRR16Q569H4 304 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 PDXDC2PQ6P474 469 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 TRMT1LQ7Z2T5 733 aaKnown RBP7.98□□□□□ -1.13
HDAC3-207ENST00000475549 FAM178BQ8IXR5 827 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 REXO1Q8N1G1 1221 aaKnown RBP7.98□□□□□ -1.13
HDAC3-207ENST00000475549 NME8Q8N427 588 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 CCDC136Q96JN2 1154 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 C6orf50Q9HD87 102 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 ERVK-5Q9HDB9 667 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 ZNF302Q9NR11 478 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 VPS54Q9P1Q0 977 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms