RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 ACTRT1Q8TDG2 376 aa14.77□□□□□ -0.04
ARHGEF39-203ENST00000475323 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.77□□□□□ -0.04
ARHGEF39-203ENST00000475323 CXorf56Q9H5V9 222 aa14.77□□□□□ -0.04
ARHGEF39-203ENST00000475323 JMJD4Q9H9V9 463 aa14.77□□□□□ -0.04
ARHGEF39-203ENST00000475323 USP17L15C9J2P7 530 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 USP17L13C9JLJ4 530 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 USP17L11C9JVI0 530 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 USP17L18D6R9N7 530 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 USP17L22D6RA61 530 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 USP17L17D6RBQ6 530 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 USP17L19D6RCP7 530 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 USP17L20D6RJB6 530 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 PON1P27169 355 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 SMTNP53814 917 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 PSMC6P62333 389 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 DHX9Q08211 1270 aaKnown RBP14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 USP17L24Q0WX57 530 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 USP17L6PQ6QN14 398 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 ARHGAP27Q6ZUM4 889 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 SEC16BQ96JE7 1060 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 LRRC27Q9C0I9 530 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 HAUS2Q9NVX0 235 aa14.77□□□□□ -0.05
ARHGEF39-203ENST00000475323 GOLGA6L7A0A1B0GV03 622 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 CETN3O15182 167 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 MED24O75448 989 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 HOXD13P35453 343 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 MARSP56192 900 aaKnown RBP14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 PPP2R2AP63151 447 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 GSTO1P78417 241 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 SETQ01105 290 aaPredicted RBP14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 KRT71Q3SY84 523 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 TCERG1LQ5VWI1 586 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 DAAM2Q86T65 1068 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 ADGRF4Q8IZF3 695 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 LRRC45Q96CN5 670 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 PBKQ96KB5 322 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 ZNF287Q9HBT7 754 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 OSGEPQ9NPF4 335 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 AKR1B1P15121 316 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 RFC4P35249 363 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 CASP4P49662 377 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 DDR1Q08345 913 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 PICALMQ13492 652 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 TMC3Q7Z5M5 1100 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 ARFGAP2Q8N6H7 521 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 BANK1Q8NDB2 785 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 CDK5RAP2Q96SN8 1893 aa14.76□□□□□ -0.05
ARHGEF39-203ENST00000475323 OPLAHO14841 1288 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 GNA14O95837 355 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 KCNA1Q09470 495 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 EXOC3L4Q17RC7 722 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 U2AF1L4Q8WU68 220 aaKnown RBP14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 MTMR4Q9NYA4 1195 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 ATP8A1Q9Y2Q0 1164 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 AKAP3O75969 853 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 CLSTN1O94985 981 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 RHBDL3P58872 404 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 KCTD1Q719H9 257 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 FAM228AQ86W67 206 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 ARMCX3Q9UH62 379 aaPredicted RBP14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 USP17L10C9JJH3 530 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 BHMG1C9JSJ3 638 aaPredicted RBP14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 DDX3XO00571 662 aaKnown RBP eCLIP14.75□□□□□ -0.057e-8■■■■■ 41.7
ARHGEF39-203ENST00000475323 CLIC2O15247 247 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 SHBGP04278 402 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 SMARCA1P28370 1054 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 PABPC4Q13310 644 aaKnown RBP eCLIP14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 ANKRD20A8PQ5CZ79 823 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 UBAP2Q5T6F2 1119 aaKnown RBP14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 FOXR2Q6PJQ5 311 aa14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 DPP8Q6V1X1 898 aaPredicted RBP14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 RTCBQ9Y3I0 505 aaKnown RBP14.75□□□□□ -0.05
ARHGEF39-203ENST00000475323 RSPH10B2B2RC85 870 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 FGGP02679 453 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 LDHCP07864 332 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 RSPH10BP0C881 870 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 PRPF4BQ13523 1007 aaKnown RBP14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 RUFY4Q6ZNE9 571 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 NT5DC3Q86UY8 548 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 PNMA2Q9UL42 364 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 STXBP5LQ9Y2K9 1186 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 BTNL10A8MVZ5 291 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 F8VZ95 297 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 CES2O00748 559 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 CHUKO15111 745 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 RAD21O60216 631 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 CAND2O75155 1236 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 GFPT2O94808 682 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 AFPP02771 609 aaKnown RBP14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 CLK2P49760 499 aaKnown RBP14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 BIRC3Q13489 604 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 SEPT2Q15019 361 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 SFR1Q86XK3 245 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 CEP57Q86XR8 500 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 FUKQ8N0W3 1084 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 SIX2Q9NPC8 291 aa14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 COL14A1Q05707 1796 aaKnown RBP14.74□□□□□ -0.05
ARHGEF39-203ENST00000475323 GPR75-ASB3A0A0A6YYF3 556 aa14.73□□□□□ -0.05
ARHGEF39-203ENST00000475323 SMIM23A6NLE4 172 aa14.73□□□□□ -0.05
ARHGEF39-203ENST00000475323 H2AFZP0C0S5 128 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms