RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 FKBP3Q00688 224 aaKnown RBP13.68□□□□□ -0.22
RNF220-211ENST00000474956 ADAM9Q13443 819 aa13.68□□□□□ -0.22
RNF220-211ENST00000474956 COG2Q14746 738 aa13.68□□□□□ -0.22
RNF220-211ENST00000474956 DNAJC21Q5F1R6 531 aaKnown RBP13.68□□□□□ -0.22
RNF220-211ENST00000474956 CCDC65Q8IXS2 484 aa13.68□□□□□ -0.22
RNF220-211ENST00000474956 LSM14BQ9BX40 385 aaKnown RBP13.68□□□□□ -0.22
RNF220-211ENST00000474956 ZNF341Q9BYN7 854 aa13.68□□□□□ -0.22
RNF220-211ENST00000474956 ARHGEF10LQ9HCE6 1279 aa13.68□□□□□ -0.22
RNF220-211ENST00000474956 TMEM150BA6NC51 233 aa13.68□□□□□ -0.22
RNF220-211ENST00000474956 RPA1P27694 616 aa13.68□□□□□ -0.22
RNF220-211ENST00000474956 NMT1P30419 496 aaKnown RBP13.68□□□□□ -0.22
RNF220-211ENST00000474956 MMP14P50281 582 aa13.68□□□□□ -0.22
RNF220-211ENST00000474956 POLR2FP61218 127 aaKnown RBP13.68□□□□□ -0.22
RNF220-211ENST00000474956 TTC31Q49AM3 519 aaPredicted RBP13.68□□□□□ -0.22
RNF220-211ENST00000474956 SLFN12Q8IYM2 578 aa13.68□□□□□ -0.22
RNF220-211ENST00000474956 CCDC42Q96M95 316 aa13.68□□□□□ -0.22
RNF220-211ENST00000474956 HERC5Q9UII4 1024 aaKnown RBP13.68□□□□□ -0.22
RNF220-211ENST00000474956 PDE2AO00408 941 aaPredicted RBP13.67□□□□□ -0.22
RNF220-211ENST00000474956 MOCS3O95396 460 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 CXCR5P32302 372 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 KIF11P52732 1056 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 KIF5AQ12840 1032 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 WNK4Q96J92 1243 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 TSGA10Q9BZW7 698 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 JADE2Q9NQC1 790 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 AJAP1Q9UKB5 411 aaPredicted RBP13.67□□□□□ -0.22
RNF220-211ENST00000474956 PLAGL2Q9UPG8 496 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 DNM3Q9UQ16 869 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 PSME4Q14997 1843 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 NCK2O43639 380 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 SHOX2O60902 331 aaPredicted RBP13.67□□□□□ -0.22
RNF220-211ENST00000474956 SLITRK3O94933 977 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 NR2F2P24468 414 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 CAP2P40123 477 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 SAMD7Q7Z3H4 446 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 LDHDQ86WU2 507 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 BANK1Q8NDB2 785 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 SUPT20HQ8NEM7 779 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 FAM76AQ8TAV0 307 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 RIN2Q8WYP3 895 aaPredicted RBP13.67□□□□□ -0.22
RNF220-211ENST00000474956 TSG101Q99816 390 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 PGAP2Q9UHJ9 254 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 FAM184BQ9ULE4 1060 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 SLC9A1P19634 815 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 DNA2P51530 1060 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 CDK17Q00537 523 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 PLS1Q14651 629 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 PTPROQ16827 1216 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 LRCH2Q5VUJ6 765 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 HGSNATQ68CP4 663 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 GJB7Q6PEY0 223 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 OTOP1Q7RTM1 612 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 SYT2Q8N9I0 419 aaPredicted RBP13.67□□□□□ -0.22
RNF220-211ENST00000474956 RUBCNQ92622 972 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 FAM107BQ9H098 131 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 VCPKMTQ9H867 229 aa13.67□□□□□ -0.22
RNF220-211ENST00000474956 FRMD3A2A2Y4 597 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 GOLGA6BA6NDN3 693 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 AGPSO00116 658 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 BUB1O43683 1085 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 VAV2P52735 878 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 PSMD2Q13200 908 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 RASA3Q14644 834 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 EFCAB13Q8IY85 973 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 SECISBP2LQ93073 1101 aaKnown RBP13.66□□□□□ -0.22
RNF220-211ENST00000474956 GDAP1L1Q96MZ0 367 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 AKAP3O75969 853 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 GCNT3O95395 438 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 MYBL2P10244 700 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 GRIPAP1Q4V328 841 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 FIGNQ5HY92 759 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 HAUS3Q68CZ6 603 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 TRIM58Q8NG06 486 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 UNC45AQ9H3U1 944 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 GOPCQ9HD26 462 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 ZNRF3Q9ULT6 936 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 FER1L6Q2WGJ9 1857 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 GOLGA6CA6NDK9 693 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 GOLGA6DP0CG33 693 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 CIITAP33076 1130 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 ITIH3Q06033 890 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 DCAF17Q5H9S7 520 aaPredicted RBP13.66□□□□□ -0.22
RNF220-211ENST00000474956 RINT1Q6NUQ1 792 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 CACNA2D4Q7Z3S7 1137 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 TRIM59Q8IWR1 403 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 NIM1KQ8IY84 436 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 MMGT1Q8N4V1 131 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 PACSIN1Q9BY11 444 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 IFIH1Q9BYX4 1025 aaKnown RBP13.66□□□□□ -0.22
RNF220-211ENST00000474956 WDR11Q9BZH6 1224 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 RANBP17Q9H2T7 1088 aaKnown RBP13.66□□□□□ -0.22
RNF220-211ENST00000474956 GOLGA6AQ9NYA3 693 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 RABGAP1Q9Y3P9 1069 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 JRKLQ9Y4A0 524 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 PCDHA13Q9Y5I0 950 aa13.66□□□□□ -0.22
RNF220-211ENST00000474956 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.66□□□□□ -0.22
RNF220-211ENST00000474956 ZNF536O15090 1300 aa13.65□□□□□ -0.22
RNF220-211ENST00000474956 A0A1W2PQJ5 194 aa13.65□□□□□ -0.22
RNF220-211ENST00000474956 TISP43B9A030 160 aa13.65□□□□□ -0.22
RNF220-211ENST00000474956 GCOM1H8Y6P7 765 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms