RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ACAD9Q9H845 621 aa23.99■■□□□ 1.43
CCM2-206ENST00000474617 TBC1D7Q9P0N9 293 aa23.99■■□□□ 1.43
CCM2-206ENST00000474617 ZNF214Q9UL59 606 aaPredicted RBP23.99■■□□□ 1.43
CCM2-206ENST00000474617 WDR64B1ANS9 1081 aa23.98■■□□□ 1.43
CCM2-206ENST00000474617 EIF3CLB5ME19 914 aaKnown RBP23.98■■□□□ 1.43
CCM2-206ENST00000474617 GCNT3O95395 438 aa23.98■■□□□ 1.43
CCM2-206ENST00000474617 HIRAP54198 1017 aaPredicted RBP23.98■■□□□ 1.43
CCM2-206ENST00000474617 MTF1Q14872 753 aa23.98■■□□□ 1.43
CCM2-206ENST00000474617 SNRNP48Q6IEG0 339 aaKnown RBP23.98■■□□□ 1.43
CCM2-206ENST00000474617 ZNF746Q6NUN9 644 aaPredicted RBP23.98■■□□□ 1.43
CCM2-206ENST00000474617 VSIG10LQ86VR7 867 aa23.98■■□□□ 1.43
CCM2-206ENST00000474617 SULF1Q8IWU6 871 aa23.98■■□□□ 1.43
CCM2-206ENST00000474617 NELFCDQ8IXH7 590 aa23.98■■□□□ 1.43
CCM2-206ENST00000474617 C4orf19Q8IY42 314 aa23.98■■□□□ 1.43
CCM2-206ENST00000474617 MYCT1Q8N699 235 aa23.98■■□□□ 1.43
CCM2-206ENST00000474617 CHST13Q8NET6 341 aa23.98■■□□□ 1.43
CCM2-206ENST00000474617 TAAR1Q96RJ0 339 aa23.98■■□□□ 1.43
CCM2-206ENST00000474617 EIF3CQ99613 913 aaKnown RBP23.98■■□□□ 1.43
CCM2-206ENST00000474617 DESI2Q9BSY9 194 aa23.98■■□□□ 1.43
CCM2-206ENST00000474617 HOMER2Q9NSB8 354 aa23.98■■□□□ 1.43
CCM2-206ENST00000474617 ARMCX3Q9UH62 379 aaPredicted RBP23.98■■□□□ 1.43
CCM2-206ENST00000474617 DAAM1Q9Y4D1 1078 aa23.98■■□□□ 1.43
CCM2-206ENST00000474617 RNF225M0QZC1 329 aaPredicted RBP23.97■■□□□ 1.43
CCM2-206ENST00000474617 EPB41P11171 864 aaKnown RBP23.97■■□□□ 1.43
CCM2-206ENST00000474617 SNRPFP62306 86 aaKnown RBP23.97■■□□□ 1.43
CCM2-206ENST00000474617 CACNB1Q02641 598 aaPredicted RBP23.97■■□□□ 1.43
CCM2-206ENST00000474617 RAD51AP2Q09MP3 1159 aa23.97■■□□□ 1.43
CCM2-206ENST00000474617 SLC30A10Q6XR72 485 aa23.97■■□□□ 1.43
CCM2-206ENST00000474617 HS2ST1Q7LGA3 356 aa23.97■■□□□ 1.43
CCM2-206ENST00000474617 PIGOQ8TEQ8 1089 aa23.97■■□□□ 1.43
CCM2-206ENST00000474617 TSGA10Q9BZW7 698 aa23.97■■□□□ 1.43
CCM2-206ENST00000474617 ANKEF1Q9NU02 776 aa23.97■■□□□ 1.43
CCM2-206ENST00000474617 CEP72Q9P209 647 aa23.97■■□□□ 1.43
CCM2-206ENST00000474617 LARSQ9P2J5 1176 aaKnown RBP23.97■■□□□ 1.43
CCM2-206ENST00000474617 FBXO40Q9UH90 709 aa23.97■■□□□ 1.43
CCM2-206ENST00000474617 CSADQ9Y600 493 aa23.97■■□□□ 1.43
CCM2-206ENST00000474617 RASSF10A6NK89 507 aa23.96■■□□□ 1.43
CCM2-206ENST00000474617 EIF2AK2P19525 551 aaKnown RBP23.96■■□□□ 1.43
CCM2-206ENST00000474617 WDR59Q6PJI9 974 aa23.96■■□□□ 1.43
CCM2-206ENST00000474617 NSMFQ6X4W1 530 aa23.96■■□□□ 1.43
CCM2-206ENST00000474617 FAM178BQ8IXR5 827 aa23.96■■□□□ 1.43
CCM2-206ENST00000474617 SMAP1Q8IYB5 467 aaPredicted RBP23.96■■□□□ 1.43
CCM2-206ENST00000474617 IL31RAQ8NI17 732 aa23.96■■□□□ 1.43
CCM2-206ENST00000474617 ANKRD7Q92527 254 aa23.96■■□□□ 1.43
CCM2-206ENST00000474617 IWS1Q96ST2 819 aa23.96■■□□□ 1.43
CCM2-206ENST00000474617 USP2O75604 605 aaPredicted RBP23.95■■□□□ 1.43
CCM2-206ENST00000474617 IREB2P48200 963 aaKnown RBP23.95■■□□□ 1.43
CCM2-206ENST00000474617 PSMC5P62195 406 aa23.95■■□□□ 1.43
CCM2-206ENST00000474617 ITGB3BPQ13352 177 aaPredicted RBP23.95■■□□□ 1.43
CCM2-206ENST00000474617 ZC3H15Q8WU90 426 aaKnown RBP23.95■■□□□ 1.43
CCM2-206ENST00000474617 EEF2KMTQ96G04 330 aa23.95■■□□□ 1.43
CCM2-206ENST00000474617 INPP4AQ96PE3 977 aaPredicted RBP23.95■■□□□ 1.43
CCM2-206ENST00000474617 FGFBP2Q9BYJ0 223 aa23.95■■□□□ 1.43
CCM2-206ENST00000474617 MMRN2Q9H8L6 949 aa23.95■■□□□ 1.43
CCM2-206ENST00000474617 MYO6Q9UM54 1294 aa23.95■■□□□ 1.43
CCM2-206ENST00000474617 NFASCO94856 1347 aa23.95■■□□□ 1.42
CCM2-206ENST00000474617 GTPBP10A4D1E9 387 aaKnown RBP23.94■■□□□ 1.42
CCM2-206ENST00000474617 RRP9O43818 475 aaKnown RBP23.94■■□□□ 1.42
CCM2-206ENST00000474617 NR3C1P04150 777 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 BAATQ14032 418 aaPredicted RBP23.94■■□□□ 1.42
CCM2-206ENST00000474617 GNPTABQ3T906 1256 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 ZNF720Q7Z2F6 126 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 CACNA2D4Q7Z3S7 1137 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 DNERQ8NFT8 737 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 CCDC43Q96MW1 224 aaKnown RBP23.94■■□□□ 1.42
CCM2-206ENST00000474617 PLCB1Q9NQ66 1216 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 AGPAT5Q9NUQ2 364 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 LOC285556D6RIA3 1793 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 SSU72P8A0A1W2PR75 194 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 KRT86O43790 486 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 NR3C2P08235 984 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 MYBP10242 640 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 XRCC5P13010 732 aaKnown RBP23.94■■□□□ 1.42
CCM2-206ENST00000474617 ABCD1P33897 745 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 NF2P35240 595 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 CASP5P51878 434 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 PADI6Q6TGC4 694 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 SLC9A9Q8IVB4 645 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 FMNL3Q8IVF7 1028 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 PROCA1Q8NCQ7 364 aaPredicted RBP23.94■■□□□ 1.42
CCM2-206ENST00000474617 CCDC42Q96M95 316 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 DRC1Q96MC2 740 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 ST6GALNAC4Q9H4F1 302 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 TMEM206Q9H813 350 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 NHEJ1Q9H9Q4 299 aaPredicted RBP23.94■■□□□ 1.42
CCM2-206ENST00000474617 FBXL5Q9UKA1 691 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 SAMM50Q9Y512 469 aa23.94■■□□□ 1.42
CCM2-206ENST00000474617 PFASO15067 1338 aa23.93■■□□□ 1.42
CCM2-206ENST00000474617 COPB2P35606 906 aa23.93■■□□□ 1.42
CCM2-206ENST00000474617 TMEM132BQ14DG7 1078 aa23.93■■□□□ 1.42
CCM2-206ENST00000474617 SPA17Q15506 151 aa23.93■■□□□ 1.42
CCM2-206ENST00000474617 ODR4Q5SWX8 454 aa23.93■■□□□ 1.42
CCM2-206ENST00000474617 CHP1Q99653 195 aa23.93■■□□□ 1.42
CCM2-206ENST00000474617 LUC7LQ9NQ29 371 aaKnown RBP23.93■■□□□ 1.42
CCM2-206ENST00000474617 KCNG1Q9UIX4 513 aa23.93■■□□□ 1.42
CCM2-206ENST00000474617 SNCAIPQ9Y6H5 919 aa23.93■■□□□ 1.42
CCM2-206ENST00000474617 ZC3H4Q9UPT8 1303 aaKnown RBP23.93■■□□□ 1.42
CCM2-206ENST00000474617 PAPPA2Q9BXP8 1791 aa23.92■■□□□ 1.42
CCM2-206ENST00000474617 SPDYE16A6NNV3 312 aaPredicted RBP23.92■■□□□ 1.42
CCM2-206ENST00000474617 RSPH10B2B2RC85 870 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms