RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 C20orf204Q6ZNR8 217 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 C11orf57Q6ZUT1 292 aaPredicted RBP5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 ARL10Q8N8L6 244 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 IWS1Q96ST2 819 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 BRD8Q9H0E9 1235 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 EPN3Q9H201 632 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 NOD2Q9HC29 1040 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 CIDEBQ9UHD4 219 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 ASB3Q9Y575 518 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 DLC1Q96QB1 1528 aa5.67□□□□□ -1.5
TMEM39A-206ENST00000473684 CTAGE15A4D2H0 777 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 TMEM232C9JQI7 657 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 KLF4O43474 513 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 CTAGE8P0CG41 777 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 VSIG8P0DPA2 414 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 EPB41P11171 864 aaKnown RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 IDO1P14902 403 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 ALAS2P22557 587 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 CABP4P57796 275 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 SGSM1Q2NKQ1 1148 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 CWF19L2Q2TBE0 894 aaKnown RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 LACTB2Q53H82 288 aaPredicted RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 NAA35Q5VZE5 725 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 SLCO4C1Q6ZQN7 724 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 ANKS3Q6ZW76 656 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 CTAGE6Q86UF2 777 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 SESTD1Q86VW0 696 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 CCAR1Q8IX12 1150 aaKnown RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 CTAGE4Q8IX94 777 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 CPLX3Q8WVH0 158 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 TEKT4Q8WW24 435 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 MAIP1Q8WWC4 291 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 OPTNQ96CV9 577 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 DCTPP1Q9H773 170 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 CACNA2D2Q9NY47 1150 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 TUBA8Q9NY65 449 aaPredicted RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 PAIP2BQ9ULR5 123 aaKnown RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 PPT2Q9UMR5 302 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 MAPK8IP1Q9UQF2 711 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 CASZ1Q86V15 1759 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 KIF24Q5T7B8 1368 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 TLDC2A0PJX2 215 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 TOM1O60784 492 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 TMCC1O94876 653 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 MBD4O95243 580 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 ANP32DO95626 131 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 CCDC166P0CW27 439 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 KIF5BP33176 963 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 BAG6P46379 1132 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 SH3BGRP55822 239 aaPredicted RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 RHBDL3P58872 404 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 MRPS35P82673 323 aaKnown RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 AP3B2Q13367 1082 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 CLPPQ16740 277 aaPredicted RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 REC114Q7Z4M0 266 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 DDX54Q8TDD1 881 aaKnown RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 CCDC12Q8WUD4 166 aaPredicted RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 NUDT8Q8WV74 236 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 STAMBPL1Q96FJ0 436 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 TTC14Q96N46 770 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 PCDH18Q9HCL0 1135 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 SLC5A4Q9NY91 659 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 TUBGCP4Q9UGJ1 667 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 PARP4Q9UKK3 1724 aaKnown RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 LIMCH1Q9UPQ0 1083 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 NSD2O96028 1365 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 COL14A1Q05707 1796 aaKnown RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 NRXN1Q9ULB1 1477 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 TECPR2O15040 1411 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 TARSL2A2RTX5 802 aaKnown RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 CBFA2T2O43439 604 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 GHRP10912 638 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 PDCP20941 246 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 STIP1P31948 543 aaKnown RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 PHEXP78562 749 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 SLC7A5Q01650 507 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 PTPN11Q06124 597 aaPredicted RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 ADCY1Q08828 1119 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 RNFT1Q5M7Z0 435 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 EMC10Q5UCC4 262 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 HGSNATQ68CP4 663 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 CCDC148Q8NFR7 591 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 ZNF570Q96NI8 536 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 CORO1BQ9BR76 489 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 UPF3BQ9BZI7 483 aaKnown RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 XPO4Q9C0E2 1151 aaKnown RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 ZNHIT6Q9NWK9 470 aaKnown RBP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 AATFQ9NY61 560 aaKnown RBP eCLIP5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 PRKAG3Q9UGI9 489 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 QRICH2Q9H0J4 1663 aa5.66□□□□□ -1.5
TMEM39A-206ENST00000473684 TRIM37O94972 964 aa5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 FLT3P36888 993 aa5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 MXRA7P84157 204 aa5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 MPRIPQ6WCQ1 1025 aa5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 CCDC81Q6ZN84 652 aa5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 NOL8Q76FK4 1167 aaKnown RBP5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 APBB1IPQ7Z5R6 666 aaPredicted RBP5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 TMEM110Q86TL2 294 aa5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 SIRT2Q8IXJ6 389 aa5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 CCDC65Q8IXS2 484 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms